Joanna Wysocka

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 20

Top Topics

Transcription Factor

Intellectual Disability

Embryonic Stem Cells

Top Venues

Nature genetics

bioRxiv : the preprint server for biology

Science (New York, N.Y.)

This page only lists publications with an associated author ORCID identifier.

Publications

Sahin Naqvi, Seungsoo Kim, Saman Tabatabaee, Anusri Pampari, Anshul Kundaje, Jonathan K Pritchard, Joanna Wysocka
Transfer learning reveals sequence determinants of the quantitative response to transcription factor dosage. bioRxiv : the preprint server for biology (2024)
Jaaved Mohammed, Neha Arora, Harold S Matthews, Karissa Hansen, Maram Bader, Susan Walsh, John R Shaffer, Seth M Weinberg, Tomek Swigut, Peter Claes, Licia Selleri, Joanna Wysocka
A common cis- regulatory variant impacts normal-range and disease-associated human facial shape through regulation of PKDCC during chondrogenesis. eLife 13 (2024)
Jaaved Mohammed, Neha Arora, Harold S Matthews, Karissa Hansen, Maram Bader, Susan Walsh, John R Shaffer, Seth M Weinberg, Tomek Swigut, Peter Claes, Licia Selleri, Joanna Wysocka
A common cis- regulatory variant impacts normal-range and disease-associated human facial shape through regulation of PKDCC during chondrogenesis. eLife 13 (2024)
Sahin Naqvi, Seungsoo Kim, Saman Tabatabaee, Anusri Pampari, Anshul Kundaje, Jonathan K Pritchard, Joanna Wysocka
Transfer learning reveals sequence determinants of the quantitative response to transcription factor dosage. bioRxiv : the preprint server for biology (2024)
Jaaved Mohammed, Neha Arora, Harold S Matthews, Karissa Hansen, Maram Bader, Susan Walsh, John R Shaffer, Seth M Weinberg, Tomek Swigut, Peter Claes, Licia Selleri, Joanna Wysocka
A common cis- regulatory variant impacts normal-range and disease-associated human facial shape through regulation of PKDCC during chondrogenesis. eLife 13 (2024)
Sahin Naqvi, Seungsoo Kim, Saman Tabatabaee, Anusri Pampari, Anshul Kundaje, Jonathan K Pritchard, Joanna Wysocka
Transfer learning reveals sequence determinants of the quantitative response to transcription factor dosage. bioRxiv : the preprint server for biology (2024)
Jaaved Mohammed, Neha Arora, Harold S Matthews, Karissa Hansen, Maram Bader, Susan Walsh, John R Shaffer, Seth M Weinberg, Tomek Swigut, Peter Claes, Licia Selleri, Joanna Wysocka
A common cis- regulatory variant impacts normal-range and disease-associated human facial shape through regulation of PKDCC during chondrogenesis. eLife 13 (2024)
Seungsoo Kim, Ekaterina Morgunova, Sahin Naqvi, Maram Bader, Mervenaz Koska, Alexander N Popov, Christy Luong, Angela N Pogson, Peter D Claes, Jussi Taipale, Joanna Wysocka
DNA-guided transcription factor cooperativity shapes face and limb mesenchyme. bioRxiv : the preprint server for biology (2023)
Vivek K Bajpai, Tomek Swigut, Jaaved Mohammed, Sahin Naqvi, Martin Arreola, Josh Tycko, Tayne C Kim, Jonathan K Pritchard, Michael C Bassik, Joanna Wysocka
A genome-wide genetic screen uncovers determinants of human pigmentation. Science (New York, N.Y.) 381 (6658) (2023)
Sahin Naqvi, Seungsoo Kim, Hanne Hoskens, Harold S Matthews, Richard A Spritz, Ophir D Klein, Benedikt Hallgrimsson, Tomek Swigut, Peter D Claes, Jonathan K Pritchard, Joanna Wysocka
Precise modulation of transcription factor levels identifies features underlying dosage sensitivity. Nature genetics (2023)
Seppe Goovaerts, Hanne Hoskens, Ryan J Eller, Noah Herrick, Anthony M Musolf, Cristina M Justice, Meng Yuan, Sahin Naqvi, Myoung Keun Lee, Dirk Vandermeulen, Heather L Szabo-Rogers, Paul A Romitti, Simeon A Boyadjiev, Mary L Marazita, John R Shaffer, Mark D Shriver, Joanna Wysocka, Susan Walsh, Seth M Weinberg, Peter D Claes
Joint multi-ancestry and admixed GWAS reveals the complex genetics behind human cranial vault shape. Nature communications 14 (1) (2023)
David Gokhman, Rachel M Agoglia, Maia Kinnebrew, Wei E Gordon, Danqiong Sun, Vivek K Bajpai, Sahin Naqvi, Coral Chen, Anthony W S Chan, Chider Chen, Dmitri A Petrov, Nadav Ahituv, Honghao Zhang, Yuji Mishina, Joanna Wysocka, Rajat Rohatgi, Hunter B Fraser
Human-chimpanzee fused cells reveal cis-regulatory divergence underlying skeletal evolution. Nature genetics 53 (4) (2021)
Tore Bleckwehl, Giuliano Crispatzu, Kaitlin Schaaf, Patricia Respuela, Michaela Bartusel, Laura Benson, Stephen J Clark, Kristel M Dorighi, Antonio Barral, Magdalena Laugsch, Wilfred F J Van IJcken, Miguel Manzanares, Joanna Wysocka, Juan I Garaycoechea, Álvaro Rada-Iglesias
Enhancer-associated H3K4 methylation safeguards in vitro germline competence. Nature communications 12 (1) (2021)
Antoine Zalc, Rahul Sinha, Gunsagar Singh Gulati, Daniel J Wesche, Patrycja Daszczuk, Tomek Swigut, Irving L Weissman, Joanna Wysocka
Reactivation of the pluripotency program precedes formation of the cranial neural crest. Science (New York, N.Y.) 371 (6529) (2021)
Chenxing Liu, Myoung Keun Lee, Sahin Naqvi, Hanne Hoskens, Dongjing Liu, Julie D White, Karlijne Indencleef, Harold Matthews, Ryan J Eller, Jiarui Li, Jaaved Mohammed, Tomek Swigut, Stephen Richmond, Mange Manyama, Benedikt Hallgrimsson, Richard A Spritz, Eleanor Feingold, Mary L Marazita, Joanna Wysocka, Susan Walsh, Mark D Shriver, Peter D Claes, Seth M Weinberg, John R Shaffer
Genome scans of facial features in East Africans and cross-population comparisons reveal novel associations. PLoS genetics 17 (8) (2021)
Sahin Naqvi, Yoeri Sleyp, Hanne Hoskens, Karlijne Indencleef, Jeffrey P Spence, Rose Bruffaerts, Ahmed Mohamed Radwan, Ryan J Eller, Stephen Richmond, Mark D Shriver, John R Shaffer, Seth M Weinberg, Susan Walsh, James Thompson, Jonathan K Pritchard, Stefan Sunaert, Hilde Peeters, Joanna Wysocka, Peter D Claes
Shared heritability of human face and brain shape. Nature genetics 53 (6) (2021)
Rajini Srinivasan, Nataliya Nady, Neha Arora, Laura J Lee, Tomek Swigut, Geeta J Narlikar, Mark Wossidlo, Joanna Wysocka
Zscan4 binds nucleosomal microsatellite DNA and protects mouse two-cell embryos from DNA damage. Science advances 6 (12) (2020)
Julie D White, Karlijne Indencleef, Sahin Naqvi, Ryan J Eller, Hanne Hoskens, Jasmien Roosenboom, Myoung Keun Lee, Jiarui Li, Jaaved Mohammed, Stephen Richmond, Ellen E Quillen, Heather L Norton, Eleanor Feingold, Tomek Swigut, Mary L Marazita, Hilde Peeters, Greet Hens, John R Shaffer, Joanna Wysocka, Susan Walsh, Seth M Weinberg, Mark D Shriver, Peter D Claes
Insights into the genetic architecture of the human face. Nature genetics 53 (1) (2020)
Daniel R Fuentes, Tomek Swigut, Joanna Wysocka
Systematic perturbation of retroviral LTRs reveals widespread long-range effects on human gene regulation. eLife 7 (2018)
Bo Gu, Tomek Swigut, Andrew Spencley, Matthew R Bauer, Mingyu Chung, Tobias Meyer, Joanna Wysocka
Transcription-coupled changes in nuclear mobility of mammalian cis-regulatory elements. Science (New York, N.Y.) 359 (6379) (2018)