Sahin Naqvi

ORCID

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 17

Top Venues

Nature genetics

bioRxiv : the preprint server for biology

PLoS genetics

Science (New York, N.Y.)

Stanford University

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Stanford University May 01 2019

United States

Postdoctoral Research Fellow :: Chemical and Systems Biology, Genetics

Publications

Sahin Naqvi, Seungsoo Kim, Saman Tabatabaee, Anusri Pampari, Anshul Kundaje, Jonathan K Pritchard, Joanna Wysocka
Transfer learning reveals sequence determinants of the quantitative response to transcription factor dosage. bioRxiv : the preprint server for biology (2024)
Sahin Naqvi, Seungsoo Kim, Saman Tabatabaee, Anusri Pampari, Anshul Kundaje, Jonathan K Pritchard, Joanna Wysocka
Transfer learning reveals sequence determinants of the quantitative response to transcription factor dosage. bioRxiv : the preprint server for biology (2024)
Sahin Naqvi, Seungsoo Kim, Saman Tabatabaee, Anusri Pampari, Anshul Kundaje, Jonathan K Pritchard, Joanna Wysocka
Transfer learning reveals sequence determinants of the quantitative response to transcription factor dosage. bioRxiv : the preprint server for biology (2024)
Seungsoo Kim, Ekaterina Morgunova, Sahin Naqvi, Maram Bader, Mervenaz Koska, Alexander N Popov, Christy Luong, Angela N Pogson, Peter D Claes, Jussi Taipale, Joanna Wysocka
DNA-guided transcription factor cooperativity shapes face and limb mesenchyme. bioRxiv : the preprint server for biology (2023)
Hakhamanesh Mostafavi, Jeffrey P Spence, Sahin Naqvi, Jonathan K Pritchard
Systematic differences in discovery of genetic effects on gene expression and complex traits. Nature genetics (2023)
Vivek K Bajpai, Tomek Swigut, Jaaved Mohammed, Sahin Naqvi, Martin Arreola, Josh Tycko, Tayne C Kim, Jonathan K Pritchard, Michael C Bassik, Joanna Wysocka
A genome-wide genetic screen uncovers determinants of human pigmentation. Science (New York, N.Y.) 381 (6658) (2023)
Sahin Naqvi, Seungsoo Kim, Hanne Hoskens, Harold S Matthews, Richard A Spritz, Ophir D Klein, Benedikt Hallgrimsson, Tomek Swigut, Peter D Claes, Jonathan K Pritchard, Joanna Wysocka
Precise modulation of transcription factor levels identifies features underlying dosage sensitivity. Nature genetics (2023)
Seppe Goovaerts, Hanne Hoskens, Ryan J Eller, Noah Herrick, Anthony M Musolf, Cristina M Justice, Meng Yuan, Sahin Naqvi, Myoung Keun Lee, Dirk Vandermeulen, Heather L Szabo-Rogers, Paul A Romitti, Simeon A Boyadjiev, Mary L Marazita, John R Shaffer, Mark D Shriver, Joanna Wysocka, Susan Walsh, Seth M Weinberg, Peter D Claes
Joint multi-ancestry and admixed GWAS reveals the complex genetics behind human cranial vault shape. Nature communications 14 (1) (2023)
Jacob W Freimer, Oren Shaked, Sahin Naqvi, Nicholas A Sinnott-Armstrong, Arwa Kathiria, Christian M Garrido, Amy F Chen, Jessica T Cortez, William J Greenleaf, Jonathan K Pritchard, Alexander Marson
Systematic discovery and perturbation of regulatory genes in human T cells reveals the architecture of immune networks. Nature genetics 54 (8) (2022)
David Gokhman, Rachel M Agoglia, Maia Kinnebrew, Wei E Gordon, Danqiong Sun, Vivek K Bajpai, Sahin Naqvi, Coral Chen, Anthony W S Chan, Chider Chen, Dmitri A Petrov, Nadav Ahituv, Honghao Zhang, Yuji Mishina, Joanna Wysocka, Rajat Rohatgi, Hunter B Fraser
Human-chimpanzee fused cells reveal cis-regulatory divergence underlying skeletal evolution. Nature genetics 53 (4) (2021)
Nicholas A Sinnott-Armstrong, Sahin Naqvi, Manuel Rivas, Jonathan K Pritchard
GWAS of three molecular traits highlights core genes and pathways alongside a highly polygenic background. eLife 10 (2021)
Hanne Hoskens, Dongjing Liu, Sahin Naqvi, Myoung Keun Lee, Ryan J Eller, Karlijne Indencleef, Julie D White, Jiarui Li, Maarten H D Larmuseau, Greet Hens, Joanna Wysocka, Susan Walsh, Stephen Richmond, Mark D Shriver, John R Shaffer, Hilde Peeters, Seth M Weinberg, Peter D Claes
3D facial phenotyping by biometric sibling matching used in contemporary genomic methodologies. PLoS genetics 17 (5) (2021)
Chenxing Liu, Myoung Keun Lee, Sahin Naqvi, Hanne Hoskens, Dongjing Liu, Julie D White, Karlijne Indencleef, Harold Matthews, Ryan J Eller, Jiarui Li, Jaaved Mohammed, Tomek Swigut, Stephen Richmond, Mange Manyama, Benedikt Hallgrimsson, Richard A Spritz, Eleanor Feingold, Mary L Marazita, Joanna Wysocka, Susan Walsh, Mark D Shriver, Peter D Claes, Seth M Weinberg, John R Shaffer
Genome scans of facial features in East Africans and cross-population comparisons reveal novel associations. PLoS genetics 17 (8) (2021)
Sahin Naqvi, Yoeri Sleyp, Hanne Hoskens, Karlijne Indencleef, Jeffrey P Spence, Rose Bruffaerts, Ahmed Mohamed Radwan, Ryan J Eller, Stephen Richmond, Mark D Shriver, John R Shaffer, Seth M Weinberg, Susan Walsh, James Thompson, Jonathan K Pritchard, Stefan Sunaert, Hilde Peeters, Joanna Wysocka, Peter D Claes
Shared heritability of human face and brain shape. Nature genetics 53 (6) (2021)
Alexander K Godfrey, Sahin Naqvi, Lukáš Chmátal, Joel M Chick, Richard N Mitchell, Steven P Gygi, Helen Skaletsky, David C Page
Quantitative analysis of Y-Chromosome gene expression across 36 human tissues. Genome research 30 (6) (2020)
Sahin Naqvi, Alexander K Godfrey, Jennifer F Hughes, Mary L Goodheart, Richard N Mitchell, David C Page
Conservation, acquisition, and functional impact of sex-biased gene expression in mammals. Science (New York, N.Y.) 365 (6450) (2020)
Julie D White, Karlijne Indencleef, Sahin Naqvi, Ryan J Eller, Hanne Hoskens, Jasmien Roosenboom, Myoung Keun Lee, Jiarui Li, Jaaved Mohammed, Stephen Richmond, Ellen E Quillen, Heather L Norton, Eleanor Feingold, Tomek Swigut, Mary L Marazita, Hilde Peeters, Greet Hens, John R Shaffer, Joanna Wysocka, Susan Walsh, Seth M Weinberg, Mark D Shriver, Peter D Claes
Insights into the genetic architecture of the human face. Nature genetics 53 (1) (2020)

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Publication Activity (10 Years)

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Sahin Naqvi