Joshua E Elias (Josh E Elias)

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 16

Top Topics

Mass Spectrometry

Ultra High Performance Liquid Chromatography

Top Venues

Nature biotechnology

Journal of proteome research

Nature structural & molecular biology

The Journal of biological chemistry

This page only lists publications with an associated author ORCID identifier.

Publications

Michael C Lanz, Shuyuan Zhang, Matthew P Swaffer, Inbal Ziv, Luisa Hernández Götz, Jacob Kim, Frank McCarthy, Daniel F Jarosz, Joshua E Elias, Jan M Skotheim
Genome dilution by cell growth drives starvation-like proteome remodeling in mammalian and yeast cells. Nature structural & molecular biology (2024)
Michael C Lanz, Shuyuan Zhang, Matthew P Swaffer, Inbal Ziv, Luisa Hernández Götz, Jacob Kim, Frank McCarthy, Daniel F Jarosz, Joshua E Elias, Jan M Skotheim
Genome dilution by cell growth drives starvation-like proteome remodeling in mammalian and yeast cells. Nature structural & molecular biology (2024)
Michael C Lanz, Lucas Fuentes Valenzuela, Joshua E Elias, Jan M Skotheim
Cell Size Contributes to Single-Cell Proteome Variation. Journal of proteome research (2023)
Brad A Palanski, Nielson Weng, Lichao Zhang, Andrew J Hilmer, Lalla A Fall, Kavya Swaminathan, Bana Jabri, Carolina Sousa, Nielsen Q Fernandez-Becker, Chaitan Khosla, Joshua E Elias
An efficient urine peptidomics workflow identifies chemically defined dietary gluten peptides from patients with celiac disease. Nature communications 13 (1) (2022)
Handuo Shi, Corey S Westfall, Jesse Kao, Pascal D Odermatt, Sarah E Anderson, Spencer Cesar, Montana Sievert, Jeremy Philippe Moore, Carlos G Gonzalez, Lichao Zhang, Joshua E Elias, Fred Chang, Kerwyn Casey Huang, Petra Anne Levin
Starvation induces shrinkage of the bacterial cytoplasm. Proceedings of the National Academy of Sciences of the United States of America 118 (24) (2021)
Peggie Cheung, Steven Schaffert, Sarah E Chang, Mai Dvorak, Michele Donato, Claudia Macaubas, Mariko H Foecke, Tie-Mei Li, Lichao Zhang, John P Coan, Grant S Schulert, Alexei A Grom, Lauren A Henderson, Peter A Nigrovic, Joshua E Elias, Or Gozani, Elizabeth D Mellins, Purvesh Khatri, Paul J Utz, Alex J Kuo
Repression of CTSG, ELANE and PRTN3-mediated histone H3 proteolytic cleavage promotes monocyte-to-macrophage differentiation. Nature immunology 22 (6) (2021)
Lichao Zhang, Patrick L McAlpine, Marlene L Heberling, Joshua E Elias
Automated Ligand Purification Platform Accelerates Immunopeptidome Analysis by Mass Spectrometry. Journal of proteome research 20 (1) (2020)
Muhammad Zoabi, Lichao Zhang, Tie-Mei Li, Joshua E Elias, Scott M Carlson, Or Gozani
Methyltransferase-like 21C (METTL21C) methylates alanine tRNA synthetase at Lys-943 in muscle tissue. The Journal of biological chemistry 295 (33) (2020)
Carlos G Gonzalez, Hannah C Wastyk, Madeline Topf, Christopher D Gardner, Justin L Sonnenburg, Joshua E Elias
High-Throughput Stool Metaproteomics: Method and Application to Human Specimens. mSystems 5 (3) (2020)
Carlos G Gonzalez, Stephanie K Tankou, Laura M Cox, Ellen P Casavant, Howard L Weiner, Joshua E Elias
Latent-period stool proteomic assay of multiple sclerosis model indicates protective capacity of host-expressed protease inhibitors. Scientific reports 9 (1) (2019)
Arun Devabhaktuni, Sarah Lin, Lichao Zhang, Kavya Swaminathan, Carlos G Gonzalez, Niclas E Olsson, Samuel M Pearlman, Keith Rawson, Joshua E Elias
TagGraph reveals vast protein modification landscapes from large tandem mass spectrometry datasets. Nature biotechnology 37 (4) (2019)
Binbin Chen, Michael S Khodadoust, Niclas E Olsson, Lisa E Wagar, Ethan Fast, Chih Long Liu, Yagmur Muftuoglu, Brian J Sworder, Maximillian Diehn, Ronald Levy, Mark M Davis, Joshua E Elias, Russ B Altman, Ash A Alizadeh
Predicting HLA class II antigen presentation through integrated deep learning. Nature biotechnology 37 (11) (2019)
Clemens Blank, Caleb Easterly, Bjoern Gruening, James Johnson, Carolin A Kolmeder, Praveen Kumar, Damon May, Subina Mehta, Bart Mesuere, Zachary Brown, Joshua E Elias, William Judson Hervey, Thomas McGowan, Thilo Muth, Brook L Nunn, Joel Rudney, Alessandro Tanca, Timothy J Griffin, Pratik D Jagtap
Disseminating Metaproteomic Informatics Capabilities and Knowledge Using the Galaxy-P Framework. Proteomes 6 (1) (2018)
Teresa Purzner, James Purzner, Taylor Buckstaff, Giorgio Cozza, Sharareh Gholamin, Jessica M Rusert, Tom A Hartl, John Sanders, Nicholas Conley, Xuecai Ge, Marc Langan, Vijay Ramaswamy, Lauren Ellis, Ulrike Litzenburger, Sara Bolin, Johanna Theruvath, Ryan Nitta, Lin Qi, Xiao-Nan Li, Gordon Li, Michael D Taylor, Robert J Wechsler-Reya, Lorenzo A Pinna, Yoon-Jae Cho, Margaret T Fuller, Joshua E Elias, Matthew P Scott
Developmental phosphoproteomics identifies the kinase CK2 as a driver of Hedgehog signaling and a therapeutic target in medulloblastoma. Science signaling 11 (547) (2018)
Samuel A Smits, Jeff Leach, Erica D Sonnenburg, Carlos G Gonzalez, Joshua S Lichtman, Gregor Reid, Rob Knight, Alphaxard Manjurano, John Changalucha, Joshua E Elias, Maria Gloria Dominguez-Bello, Justin L Sonnenburg
Seasonal cycling in the gut microbiome of the Hadza hunter-gatherers of Tanzania. Science (New York, N.Y.) 357 (6353) (2017)
Peder J Lund, Joshua E Elias, Mark M Davis
Global Analysis of O-GlcNAc Glycoproteins in Activated Human T Cells. Journal of immunology (Baltimore, Md. : 1950) 197 (8) (2016)
Joshua S Lichtman, Emily Alsentzer, Mia Jaffe, Daniel Sprockett, Evan Masutani, Elvis Ikwa, Gabriela K Fragiadakis, David Clifford, Bevan Emma Huang, Justin L Sonnenburg, Kerwyn Casey Huang, Joshua E Elias
The effect of microbial colonization on the host proteome varies by gastrointestinal location. The ISME journal 10 (5) (2015)