Justin D Silverman

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 12

Top Venues

bioRxiv : the preprint server for biology

PLoS computational biology

mBio

Science (New York, N.Y.)

Penn State

Duke University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Penn State

United States

Assistant Professor :: Information Science and Technology

Education History

Duke University Sep 01 2014 - May 11 2019

United States

PHD :: Computational Biology and Bioinformatics

Publications

Michelle Pistner Nixon, Gregory B Gloor, Justin D Silverman
Beyond Normalization: Incorporating Scale Uncertainty in Microbiome and Gene Expression Analysis. bioRxiv : the preprint server for biology (2024)
Michelle Pistner Nixon, Gregory B Gloor, Justin D Silverman
Beyond Normalization: Incorporating Scale Uncertainty in Microbiome and Gene Expression Analysis. bioRxiv : the preprint server for biology (2024)
Michelle Pistner Nixon, Gregory B Gloor, Justin D Silverman
Beyond Normalization: Incorporating Scale Uncertainty in Microbiome and Gene Expression Analysis. bioRxiv : the preprint server for biology (2024)
Kyle C McGovern, Michelle Pistner Nixon, Justin D Silverman
Addressing erroneous scale assumptions in microbe and gene set enrichment analysis. PLoS computational biology 19 (11) (2023)
Maksim A Yakovlev, Ke Liang, Carolyn R Zaino, Daniel J Vanselow, Andrew L Sugarman, Alex Y Lin, Patrick La Riviere, Yuxi Zheng, Justin D Silverman, John C Leichty, Sharon Xiaolei Huang, Keith C Cheng
Quantitative Geometric Modeling of Blood Cells from X-ray Histotomograms of Whole Zebrafish Larvae. bioRxiv : the preprint server for biology (2023)
Emily Van Syoc, Michelle Pistner Nixon, Justin D Silverman, Yuhong Luo, Frank J Gonzalez, Ilze Elbere, Janis Klovins, Andrew D Patterson, Connie J Rogers, Erika Ganda
Changes in the gut mycobiome are associated with Type 2 diabetes mellitus and metformin treatment across populations. bioRxiv : the preprint server for biology (2023)
Nicholas G Davies, Sam Abbott, Rosanna C Barnard, Christopher I Jarvis, Adam J Kucharski, James D Munday, Carl A B Pearson, Timothy W Russell, Damien C Tully, Alex D Washburne, Tom Wenseleers, Amy Gimma, William Waites, Kerry L M Wong, Kevin van Zandvoort, Justin D Silverman, null null, null null, Karla DiazOrdaz, Ruth H Keogh, Rosalind M M Eggo, Sebastian Funk, Mark Jit, Katherine E Atkins, W John Edmunds
Estimated transmissibility and impact of SARS-CoV-2 lineage B.1.1.7 in England. Science (New York, N.Y.) 372 (6538) (2021)
Justin D Silverman, Rachael J Bloom, Sharon Jiang, Heather K Durand, Eric Dallow, Sayan Mukherjee, Lawrence A David
Measuring and mitigating PCR bias in microbiota datasets. PLoS computational biology 17 (7) (2021)
Justin D Silverman, Nathaniel Hupert, Alex D Washburne
Using influenza surveillance networks to estimate state-specific prevalence of SARS-CoV-2 in the United States. Science translational medicine 12 (554) (2020)
Max M Villa, Rachael J Bloom, Justin D Silverman, Heather K Durand, Sharon Jiang, Anchi Wu, Eric P Dallow, Shuqiang Huang, Lingchong You, Lawrence A David
Interindividual Variation in Dietary Carbohydrate Metabolism by Gut Bacteria Revealed with Droplet Microfluidic Culture. mSystems 5 (3) (2020)
Zachary C Holmes, Justin D Silverman, Holly K Dressman, Zhengzheng Wei, Eric P Dallow, Sarah C Armstrong, Patrick C Seed, John F Rawls, Lawrence A David
Short-Chain Fatty Acid Production by Gut Microbiota from Children with Obesity Differs According to Prebiotic Choice and Bacterial Community Composition. mBio 11 (4) (2020)
Justin D Silverman, Alex D Washburne, Sayan Mukherjee, Lawrence A David
A phylogenetic transform enhances analysis of compositional microbiota data. eLife 6 (2017)

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Publication Activity (10 Years)

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Justin D Silverman