Ludwig Lautenbacher

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 11

Top Topics

Histone Deacetylase

Mass Spectrometry

Top Venues

bioRxiv : the preprint server for biology

Nature communications

Nature chemical biology

This page only lists publications with an associated author ORCID identifier.

Publications

Ludwig Lautenbacher, Kevin L Yang, Tobias Kockmann, Christian Panse, Matthew Chambers, Elias Kahl, Fengchao Yu, Wassim Gabriel, Dulguun Bold, Tobias Schmidt, Kai Li, Brendan X MacLean, Alexey I Nesvizhskii, Mathias Wilhelm
Koina: Democratizing machine learning for proteomics research. bioRxiv : the preprint server for biology (2024)
Ludwig Lautenbacher, Kevin L Yang, Tobias Kockmann, Christian Panse, Matthew Chambers, Elias Kahl, Fengchao Yu, Wassim Gabriel, Dulguun Bold, Tobias Schmidt, Kai Li, Brendan X MacLean, Alexey I Nesvizhskii, Mathias Wilhelm
Koina: Democratizing machine learning for proteomics research. bioRxiv : the preprint server for biology (2024)
Ludwig Lautenbacher, Kevin L Yang, Tobias Kockmann, Christian Panse, Matthew Chambers, Elias Kahl, Fengchao Yu, Wassim Gabriel, Dulguun Bold, Tobias Schmidt, Kai Li, Brendan X MacLean, Alexey I Nesvizhskii, Mathias Wilhelm
Koina: Democratizing machine learning for proteomics research. bioRxiv : the preprint server for biology (2024)
Mario Picciani, Wassim Gabriel, Victor-George Giurcoiu, Omar Shouman, Firas Hamood, Ludwig Lautenbacher, Cecilia Bang Jensen, Julian Müller, Mostafa Kalhor, Armin Soleymaniniya, Bernhard Kuster, Matthew The, Mathias Wilhelm
Oktoberfest: Open-source spectral library generation and rescoring pipeline based on Prosit. Proteomics (2023)
Jana Zecha, Florian P Bayer, Svenja Wiechmann, Julia Woortman, Nicola Berner, Julian Müller, Annika Schneider, Karl Kramer, Mar Abril-Gil, Thomas A Hopf, Leonie Reichart, Lin Chen, Fynn M Hansen, Severin Lechner, Patroklos Samaras, Stephan Eckert, Ludwig Lautenbacher, Maria Reinecke, Firas Hamood, Polina Prokofeva, Larsen Vornholz, Chiara Falcomatà, Madeleine Dorsch, Ayla Schröder, Anton Venhuizen, Stephanie Wilhelm, Guillaume Médard, Gabriele Stoehr, Juergen Ruland, Barbara M Grüner, Dieter Saur, Maike Buchner, Benjamin Ruprecht, Hannes Hahne, Matthew The, Mathias Wilhelm, Bernhard Kuster
Decrypting drug actions and protein modifications by dose- and time-resolved proteomics. Science (New York, N.Y.) (2023)
Piero Giansanti, Patroklos Samaras, Yangyang Bian, Chen Meng, Andrea Coluccio, Martin Frejno, Hannah Jakubowsky, Sophie Dobiasch, Rashmi R Hazarika, Julia Woortman, Julia Calzada-Wack, Johannes Krumm, Sebastian Mueller, Chien-Yun Lee, Nicole Wimberger, Ludwig Lautenbacher, Zonera Hassan, Yun-Chien Chang, Chiara Falcomatà, Florian P Bayer, Stefanie Bärthel, Tobias K Schmidt, Roland Rad, Stephanie E Combs, Matthew The, Frank Johannes, Dieter Saur, Martin Hrabě de Angelis, Mathias Wilhelm, Günter Schneider, Bernhard Kuster
Mass spectrometry-based draft of the mouse proteome. Nature methods 19 (7) (2022)
Severin Lechner, Martin Ian P Malgapo, Christian Graetz, Raphael R Steimbach, Agnes Baron, Patrick Leopold Rüther, Simon Nadal, Carmen Stumpf, Christina Loos, Xin Ku, Polina Prokofeva, Ludwig Lautenbacher, Tino Heimburg, Vivian Würf, Chen Meng, Mathias Wilhelm, Wolfgang Sippl, Karin Kleigrewe, Josch K Pauling, Karl Kramer, Aubry K Miller, Michael W Pfaffl, Maurine E Linder, Bernhard Kuster, Guillaume Médard
Target deconvolution of HDAC pharmacopoeia reveals MBLAC2 as common off-target. Nature chemical biology 18 (8) (2022)
Wassim Gabriel, Matthew The, Daniel P Zolg, Florian P Bayer, Omar Shouman, Ludwig Lautenbacher, Karsten Schnatbaum, Johannes Zerweck, Tobias Knaute, Bernard Delanghe, Andreas Huhmer, Holger Wenschuh, Ulf Reimer, Guillaume Médard, Bernhard Kuster, Mathias Wilhelm
Prosit-TMT: Deep Learning Boosts Identification of TMT-Labeled Peptides. Analytical chemistry 94 (20) (2022)
Mathias Wilhelm, Daniel P Zolg, Michael Graber, Siegfried Gessulat, Tobias K Schmidt, Karsten Schnatbaum, Celina Tretter, Philipp Seifert, Niklas de Andrade Krätzig, Johannes Zerweck, Tobias Knaute, Eva Bräunlein, Patroklos Samaras, Ludwig Lautenbacher, Susan Klaeger, Holger Wenschuh, Roland Rad, Bernard Delanghe, Andreas Huhmer, Steven A Carr, Karl R Clauser, Angela M Krackhardt, Ulf Reimer, Bernhard Kuster
Author Correction: Deep learning boosts sensitivity of mass spectrometry-based immunopeptidomics. Nature communications 12 (1) (2021)
Ludwig Lautenbacher, Patroklos Samaras, Julian Muller, Andreas Grafberger, Marwin Shraideh, Johannes Rank, Simon T Fuchs, Tobias K Schmidt, Matthew The, Christian Dallago, Holger Wittges, Burkhard Rost, Helmut Krcmar, Bernhard Kuster, Mathias Wilhelm
ProteomicsDB: toward a FAIR open-source resource for life-science research. Nucleic acids research (2021)
Mathias Wilhelm, Daniel P Zolg, Michael Graber, Siegfried Gessulat, Tobias K Schmidt, Karsten Schnatbaum, Celina Tretter, Philipp Seifert, Niklas de Andrade Krätzig, Johannes Zerweck, Tobias Knaute, Eva Bräunlein, Patroklos Samaras, Ludwig Lautenbacher, Susan Klaeger, Holger Wenschuh, Roland Rad, Bernard Delanghe, Andreas Huhmer, Steven A Carr, Karl R Clauser, Angela M Krackhardt, Ulf Reimer, Bernhard Kuster
Deep learning boosts sensitivity of mass spectrometry-based immunopeptidomics. Nature communications 12 (1) (2021)