Qingyi Yang

ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 21

Top Venues

Journal of medicinal chemistry

Nature chemistry

Journal of chemical theory and computation

Journal of chemical information and modeling

This page only lists publications with an associated author ORCID identifier.

Publications

Charlotte M N Allerton, Joel T Arcari, Lisa M Aschenbrenner, Melissa Avery, Bruce M Bechle, Mohammad Amin Behzadi, Britton Boras, Leanne M Buzon, Rhonda D Cardin, Natasha R Catlin, Anthony A Carlo, Karen J Coffman, Alyssa Dantonio, Li Di, Heather Eng, Kathleen A Farley, Rose Ann Ferre, Steven S Gernhardt, Scott A Gibson, Samantha E Greasley, Siennah R Greenfield, Brett L Hurst, Amit S Kalgutkar, Emi Kimito, Lorraine F Lanyon, Gabrielle H Lovett, Yajing Lian, Wei Liu, Luis A Martínez Alsina, Stephen Noell, R Scott Obach, Dafydd R Owen, Nandini C Patel, Devendra K Rai, Matthew R Reese, Hussin A Rothan, Sylvie Sakata, Matthew F Sammons, Jean G Sathish, Raman Sharma, Claire M Steppan, Jamison B Tuttle, Patrick R Verhoest, Liuqing Wei, Qingyi Yang, Irina Yurgelonis, Yuao Zhu
A Second-Generation Oral SARS-CoV-2 Main Protease Inhibitor Clinical Candidate for the Treatment of COVID-19. Journal of medicinal chemistry (2024)
Emma King-Smith, Simon Berritt, Louise Bernier, Xinjun Hou, Jacquelyn L Klug-McLeod, Jason Mustakis, Neal W Sach, Joseph W Tucker, Qingyi Yang, Roger M Howard, Alpha A Lee
Probing the chemical 'reactome' with high-throughput experimentation data. Nature chemistry 16 (4) (2024)
Emma King-Smith, Simon Berritt, Louise Bernier, Xinjun Hou, Jacquelyn L Klug-McLeod, Jason Mustakis, Neal W Sach, Joseph W Tucker, Qingyi Yang, Roger M Howard, Alpha A Lee
Probing the chemical 'reactome' with high-throughput experimentation data. Nature chemistry 16 (4) (2024)
Charlotte M N Allerton, Joel T Arcari, Lisa M Aschenbrenner, Melissa Avery, Bruce M Bechle, Mohammad Amin Behzadi, Britton Boras, Leanne M Buzon, Rhonda D Cardin, Natasha R Catlin, Anthony A Carlo, Karen J Coffman, Alyssa Dantonio, Li Di, Heather Eng, Kathleen A Farley, Rose Ann Ferre, Steven S Gernhardt, Scott A Gibson, Samantha E Greasley, Siennah R Greenfield, Brett L Hurst, Amit S Kalgutkar, Emi Kimito, Lorraine F Lanyon, Gabrielle H Lovett, Yajing Lian, Wei Liu, Luis A Martínez Alsina, Stephen Noell, R Scott Obach, Dafydd R Owen, Nandini C Patel, Devendra K Rai, Matthew R Reese, Hussin A Rothan, Sylvie Sakata, Matthew F Sammons, Jean G Sathish, Raman Sharma, Claire M Steppan, Jamison B Tuttle, Patrick R Verhoest, Liuqing Wei, Qingyi Yang, Irina Yurgelonis, Yuao Zhu
A Second-Generation Oral SARS-CoV-2 Main Protease Inhibitor Clinical Candidate for the Treatment of COVID-19. Journal of medicinal chemistry 67 (16) (2024)
Emma King-Smith, Simon Berritt, Louise Bernier, Xinjun Hou, Jacquelyn L Klug-McLeod, Jason Mustakis, Neal W Sach, Joseph W Tucker, Qingyi Yang, Roger M Howard, Alpha A Lee
Probing the chemical 'reactome' with high-throughput experimentation data. Nature chemistry (2024)
Charlotte M N Allerton, Joel T Arcari, Lisa M Aschenbrenner, Melissa Avery, Bruce M Bechle, Mohammad Amin Behzadi, Britton Boras, Leanne M Buzon, Rhonda D Cardin, Natasha R Catlin, Anthony A Carlo, Karen J Coffman, Alyssa Dantonio, Li Di, Heather Eng, Kathleen A Farley, Rose Ann Ferre, Steven S Gernhardt, Scott A Gibson, Samantha E Greasley, Siennah R Greenfield, Brett L Hurst, Amit S Kalgutkar, Emi Kimito, Lorraine F Lanyon, Gabrielle H Lovett, Yajing Lian, Wei Liu, Luis A Martínez Alsina, Stephen Noell, R Scott Obach, Dafydd R Owen, Nandini C Patel, Devendra K Rai, Matthew R Reese, Hussin A Rothan, Sylvie Sakata, Matthew F Sammons, Jean G Sathish, Raman Sharma, Claire M Steppan, Jamison B Tuttle, Patrick R Verhoest, Liuqing Wei, Qingyi Yang, Irina Yurgelonis, Yuao Zhu
A Second-Generation Oral SARS-CoV-2 Main Protease Inhibitor Clinical Candidate for the Treatment of COVID-19. Journal of medicinal chemistry 67 (16) (2024)
Emma King-Smith, Simon Berritt, Louise Bernier, Xinjun Hou, Jacquelyn L Klug-McLeod, Jason Mustakis, Neal W Sach, Joseph W Tucker, Qingyi Yang, Roger M Howard, Alpha A Lee
Probing the chemical 'reactome' with high-throughput experimentation data. Nature chemistry 16 (4) (2024)
Charlotte M N Allerton, Joel T Arcari, Lisa M Aschenbrenner, Melissa Avery, Bruce M Bechle, Mohammad Amin Behzadi, Britton Boras, Leanne M Buzon, Rhonda D Cardin, Natasha R Catlin, Anthony A Carlo, Karen J Coffman, Alyssa Dantonio, Li Di, Heather Eng, Kathleen A Farley, Rose Ann Ferre, Steven S Gernhardt, Scott A Gibson, Samantha E Greasley, Siennah R Greenfield, Brett L Hurst, Amit S Kalgutkar, Emi Kimito, Lorraine F Lanyon, Gabrielle H Lovett, Yajing Lian, Wei Liu, Luis A Martínez Alsina, Stephen Noell, R Scott Obach, Dafydd R Owen, Nandini C Patel, Devendra K Rai, Matthew R Reese, Hussin A Rothan, Sylvie Sakata, Matthew F Sammons, Jean G Sathish, Raman Sharma, Claire M Steppan, Jamison B Tuttle, Patrick R Verhoest, Liuqing Wei, Qingyi Yang, Irina Yurgelonis, Yuao Zhu
A Second-Generation Oral SARS-CoV-2 Main Protease Inhibitor Clinical Candidate for the Treatment of COVID-19. Journal of medicinal chemistry 67 (16) (2024)
Charlotte M N Allerton, Joel T Arcari, Lisa M Aschenbrenner, Melissa Avery, Bruce M Bechle, Mohammad Amin Behzadi, Britton Boras, Leanne M Buzon, Rhonda D Cardin, Natasha R Catlin, Anthony A Carlo, Karen J Coffman, Alyssa Dantonio, Li Di, Heather Eng, Kathleen A Farley, Rose Ann Ferre, Steven S Gernhardt, Scott A Gibson, Samantha E Greasley, Siennah R Greenfield, Brett L Hurst, Amit S Kalgutkar, Emi Kimito, Lorraine F Lanyon, Gabrielle H Lovett, Yajing Lian, Wei Liu, Luis A Martínez Alsina, Stephen Noell, R Scott Obach, Dafydd R Owen, Nandini C Patel, Devendra K Rai, Matthew R Reese, Hussin A Rothan, Sylvie Sakata, Matthew F Sammons, Jean G Sathish, Raman Sharma, Claire M Steppan, Jamison B Tuttle, Patrick R Verhoest, Liuqing Wei, Qingyi Yang, Irina Yurgelonis, Yuao Zhu
A Second-Generation Oral SARS-CoV-2 Main Protease Inhibitor Clinical Candidate for the Treatment of COVID-19. Journal of medicinal chemistry (2024)
Michelle R Garnsey, Aaron C Smith, Jana Polivkova, Autumn L Arons, Guoyun Bai, Caroline A Blakemore, Markus Boehm, Leanne M Buzon, Sarah N Campion, Matthew Cerny, Shiao-Chi Chang, Karen Coffman, Kathleen A Farley, Kari R Fonseca, Kristen K Ford, Jeonifer Garren, Jimmy X Kong, Martin R M Koos, Daniel W Kung, Yajing Lian, Monica M Li, Qifang Li, Luis A Martinez-Alsina, Rebecca O'Connor, Kevin Ogilvie, Kiyoyuki Omoto, Brian Raymer, Matthew R Reese, Tim Ryder, Lacey Samp, Kimberly A Stevens, Daniel W Widlicka, Qingyi Yang, Kaicheng Zhu, Jean-Philippe Fortin, Matthew F Sammons
Discovery of the Potent and Selective MC4R Antagonist PF-07258669 for the Potential Treatment of Appetite Loss. Journal of medicinal chemistry 66 (5) (2023)
Siennah R Greenfield, Heather Eng, Qingyi Yang, Chunyang Guo, Laura J Byrnes, Alyssa L Dantonio, Graham M West, Li Di, Amit S Kalgutkar
Species differences in plasma protein binding of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) main protease inhibitor nirmatrelvir. Xenobiotica; the fate of foreign compounds in biological systems (2023)
Michelle R Garnsey, Aaron C Smith, Jana Polivkova, Autumn L Arons, Guoyun Bai, Caroline A Blakemore, Markus Boehm, Leanne M Buzon, Sarah N Campion, Matthew Cerny, Shiao-Chi Chang, Karen Coffman, Kathleen A Farley, Kari R Fonseca, Kristen K Ford, Jeonifer Garren, Jimmy X Kong, Martin R M Koos, Daniel W Kung, Yajing Lian, Monica M Li, Qifang Li, Luis A Martinez-Alsina, Rebecca O'Connor, Kevin Ogilvie, Kiyoyuki Omoto, Brian Raymer, Matthew R Reese, Tim Ryder, Lacey Samp, Kimberly A Stevens, Daniel W Widlicka, Qingyi Yang, Kaicheng Zhu, Jean-Philippe Fortin, Matthew F Sammons
Discovery of the Potent and Selective MC4R Antagonist PF-07258669 for the Potential Treatment of Appetite Loss. Journal of medicinal chemistry 66 (5) (2023)
Michelle R Garnsey, Aaron C Smith, Jana Polivkova, Autumn L Arons, Guoyun Bai, Caroline A Blakemore, Markus Boehm, Leanne M Buzon, Sarah N Campion, Matthew Cerny, Shiao-Chi Chang, Karen Coffman, Kathleen A Farley, Kari R Fonseca, Kristen K Ford, Jeonifer Garren, Jimmy X Kong, Martin R M Koos, Daniel W Kung, Yajing Lian, Monica M Li, Qifang Li, Luis A Martinez-Alsina, Rebecca O'Connor, Kevin Ogilvie, Kiyoyuki Omoto, Brian Raymer, Matthew R Reese, Tim Ryder, Lacey Samp, Kimberly A Stevens, Daniel W Widlicka, Qingyi Yang, Kaicheng Zhu, Jean-Philippe Fortin, Matthew F Sammons
Discovery of the Potent and Selective MC4R Antagonist PF-07258669 for the Potential Treatment of Appetite Loss. Journal of medicinal chemistry (2023)
Bai Xue, Qingyi Yang, Qiaochu Zhang, Xiao Wan, Dong Fang, Xiaolu Lin, Guangxu Sun, Gianpaolo Gobbo, Fenglei Cao, Alan M Mathiowetz, Benjamin J Burke, Robert A Kumpf, Brajesh K Rai, Geoffrey P F Wood, Frank C Pickard, Junmei Wang, Peiyu Zhang, Jian Ma, Yide Alan Jiang, Shuhao Wen, Xinjun Hou, Junjie Zou, Mingjun Yang
Development and Comprehensive Benchmark of a High-Quality AMBER-Consistent Small Molecule Force Field with Broad Chemical Space Coverage for Molecular Modeling and Free Energy Calculation. Journal of chemical theory and computation (2023)
Bai Xue, Qingyi Yang, Qiaochu Zhang, Xiao Wan, Dong Fang, Xiaolu Lin, Guangxu Sun, Gianpaolo Gobbo, Fenglei Cao, Alan M Mathiowetz, Benjamin J Burke, Robert A Kumpf, Brajesh K Rai, Geoffrey P F Wood, Frank C Pickard, Junmei Wang, Peiyu Zhang, Jian Ma, Yide Alan Jiang, Shuhao Wen, Xinjun Hou, Junjie Zou, Mingjun Yang
Development and Comprehensive Benchmark of a High-Quality AMBER-Consistent Small Molecule Force Field with Broad Chemical Space Coverage for Molecular Modeling and Free Energy Calculation. Journal of chemical theory and computation 20 (2) (2023)
Michelle R Garnsey, Aaron C Smith, Jana Polivkova, Autumn L Arons, Guoyun Bai, Caroline A Blakemore, Markus Boehm, Leanne M Buzon, Sarah N Campion, Matthew Cerny, Shiao-Chi Chang, Karen Coffman, Kathleen A Farley, Kari R Fonseca, Kristen K Ford, Jeonifer Garren, Jimmy X Kong, Martin R M Koos, Daniel W Kung, Yajing Lian, Monica M Li, Qifang Li, Luis A Martinez-Alsina, Rebecca O'Connor, Kevin Ogilvie, Kiyoyuki Omoto, Brian Raymer, Matthew R Reese, Tim Ryder, Lacey Samp, Kimberly A Stevens, Daniel W Widlicka, Qingyi Yang, Kaicheng Zhu, Jean-Philippe Fortin, Matthew F Sammons
Discovery of the Potent and Selective MC4R Antagonist PF-07258669 for the Potential Treatment of Appetite Loss. Journal of medicinal chemistry 66 (5) (2023)
Bai Xue, Qingyi Yang, Qiaochu Zhang, Xiao Wan, Dong Fang, Xiaolu Lin, Guangxu Sun, Gianpaolo Gobbo, Fenglei Cao, Alan M Mathiowetz, Benjamin J Burke, Robert A Kumpf, Brajesh K Rai, Geoffrey P F Wood, Frank C Pickard, Junmei Wang, Peiyu Zhang, Jian Ma, Yide Alan Jiang, Shuhao Wen, Xinjun Hou, Junjie Zou, Mingjun Yang
Development and Comprehensive Benchmark of a High-Quality AMBER-Consistent Small Molecule Force Field with Broad Chemical Space Coverage for Molecular Modeling and Free Energy Calculation. Journal of chemical theory and computation 20 (2) (2023)
Brajesh K Rai, Vishnu Sresht, Qingyi Yang, Ray Unwalla, Meihua Tu, Alan M Mathiowetz, Gregory A Bakken
TorsionNet: A Deep Neural Network to Rapidly Predict Small-Molecule Torsional Energy Profiles with the Accuracy of Quantum Mechanics. Journal of chemical information and modeling 62 (4) (2022)
Brajesh K Rai, Vishnu Sresht, Qingyi Yang, Ray Unwalla, Meihua Tu, Alan M Mathiowetz, Gregory A Bakken
Comprehensive Assessment of Torsional Strain in Crystal Structures of Small Molecules and Protein-Ligand Complexes using ab Initio Calculations. Journal of chemical information and modeling 59 (10) (2019)
Alpha A Lee, Qingyi Yang, Vishnu Sresht, Peter Bolgar, Xinjun Hou, Jacquelyn L Klug-McLeod, Christopher R Butter
Molecular Transformer unifies reaction prediction and retrosynthesis across pharma chemical space. Chemical communications (Cambridge, England) 55 (81) (2019)
Qingyi Yang, Woodrow Burchett, Gregory S Steeno, Shuai Liu, Mingjun Yang, David L Mobley, Xinjun Hou
Optimal designs for pairwise calculation: An application to free energy perturbation in minimizing prediction variability. Journal of computational chemistry 41 (3) (2019)

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Publication Activity (10 Years)

Top Topics

Top Venues

Qingyi Yang