Riza M Daza

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 26

Top Topics

Gestational Age

Gene Expression

Top Venues

Science (New York, N.Y.)

bioRxiv : the preprint server for biology

Communications biology

This page only lists publications with an associated author ORCID identifier.

Publications

David F Read, Gregory T Booth, Riza M Daza, Dana L Jackson, Rula Green Gladden, Sanjay R Srivatsan, Brent Ewing, Jennifer M Franks, Cailyn H Spurrell, Anne Roshella Gomes, Diana O'Day, Aishwarya A Gogate, Beth K Martin, Haleigh Larson, Christian Pfleger, Joshua T Schiffer, Yiing Lin, Jay Shendure, Shin Lin, Cole Trapnell
Single-cell analysis of chromatin and expression reveals age- and sex-associated alterations in the human heart. Communications biology 7 (1) (2024)
David F Read, Gregory T Booth, Riza M Daza, Dana L Jackson, Rula Green Gladden, Sanjay R Srivatsan, Brent Ewing, Jennifer M Franks, Cailyn H Spurrell, Anne Roshella Gomes, Diana O'Day, Aishwarya A Gogate, Beth K Martin, Haleigh Larson, Christian Pfleger, Joshua T Schiffer, Yiing Lin, Jay Shendure, Shin Lin, Cole Trapnell
Single-cell analysis of chromatin and expression reveals age- and sex-associated alterations in the human heart. Communications biology 7 (1) (2024)
Chengxiang Qiu, Beth K Martin, Ian C Welsh, Riza M Daza, Truc-Mai Le, Xingfan Huang, Eva K Nichols, Megan L Taylor, Olivia Fulton, Diana R O'Day, Anne Roshella Gomes, Saskia Ilcisin, Sanjay Srivatsan, Xinxian Deng, Christine M Disteche, William Stafford Noble, Nobuhiko Hamazaki, Cecilia B Moens, David Kimelman, Junyue Cao, Alexander F Schier, Malte Spielmann, Stephen A Murray, Cole Trapnell, Jay Shendure
A single-cell time-lapse of mouse prenatal development from gastrula to birth. Nature (2024)
Florence M Chardon, Troy A McDiarmid, Nicholas F Page, Riza M Daza, Beth K Martin, Silvia Domcke, Samuel G Regalado, Jean-Benoît Lalanne, Diego Calderon, Xiaoyi Li, Joshua T Schiffer, Stephan J Sanders, Nadav Ahituv, Jay Shendure
Multiplex, single-cell CRISPRa screening for cell type specific regulatory elements. Nature communications 15 (1) (2024)
Chengxiang Qiu, Beth K Martin, Ian C Welsh, Riza M Daza, Truc-Mai Le, Xingfan Huang, Eva K Nichols, Megan L Taylor, Olivia Fulton, Diana R O'Day, Anne Roshella Gomes, Saskia Ilcisin, Sanjay Srivatsan, Xinxian Deng, Christine M Disteche, William Stafford Noble, Nobuhiko Hamazaki, Cecilia B Moens, David Kimelman, Junyue Cao, Alexander F Schier, Malte Spielmann, Stephen A Murray, Cole Trapnell, Jay Shendure
A single-cell time-lapse of mouse prenatal development from gastrula to birth. Nature 626 (8001) (2024)
Sudarshan Pinglay, Jean-Beno Æt Lalanne, Riza M Daza, Jonas Koeppel, Xiaoyi Li, David S Lee, Jay Shendure
Multiplex generation and single cell analysis of structural variants in a mammalian genome. bioRxiv : the preprint server for biology (2024)
Chengxiang Qiu, Beth K Martin, Ian C Welsh, Riza M Daza, Truc-Mai Le, Xingfan Huang, Eva K Nichols, Megan L Taylor, Olivia Fulton, Diana R O'Day, Anne Roshella Gomes, Saskia Ilcisin, Sanjay Srivatsan, Xinxian Deng, Christine M Disteche, William Stafford Noble, Nobuhiko Hamazaki, Cecilia B Moens, David Kimelman, Junyue Cao, Alexander F Schier, Malte Spielmann, Stephen A Murray, Cole Trapnell, Jay Shendure
A single-cell time-lapse of mouse prenatal development from gastrula to birth. Nature 626 (8001) (2024)
David F Read, Gregory T Booth, Riza M Daza, Dana L Jackson, Rula Green Gladden, Sanjay R Srivatsan, Brent Ewing, Jennifer M Franks, Cailyn H Spurrell, Anne Roshella Gomes, Diana O'Day, Aishwarya A Gogate, Beth K Martin, Haleigh Larson, Christian Pfleger, Joshua T Schiffer, Yiing Lin, Jay Shendure, Shin Lin, Cole Trapnell
Single-cell analysis of chromatin and expression reveals age- and sex-associated alterations in the human heart. Communications biology 7 (1) (2024)
Chengxiang Qiu, Beth K Martin, Ian C Welsh, Riza M Daza, Truc-Mai Le, Xingfan Huang, Eva K Nichols, Megan L Taylor, Olivia Fulton, Diana R O'Day, Anne Roshella Gomes, Saskia Ilcisin, Sanjay Srivatsan, Xinxian Deng, Christine M Disteche, William Stafford Noble, Nobuhiko Hamazaki, Cecilia B Moens, David Kimelman, Junyue Cao, Alexander F Schier, Malte Spielmann, Stephen A Murray, Cole Trapnell, Jay Shendure
A single-cell time-lapse of mouse prenatal development from gastrula to birth. Nature (2024)
Chengxiang Qiu, Beth K Martin, Ian C Welsh, Riza M Daza, Truc-Mai Le, Xingfan Huang, Eva K Nichols, Megan L Taylor, Olivia Fulton, Diana R O'Day, Anne Roshella Gomes, Saskia Ilcisin, Sanjay Srivatsan, Xinxian Deng, Christine M Disteche, William Stafford Noble, Nobuhiko Hamazaki, Cecilia B Moens, David Kimelman, Junyue Cao, Alexander F Schier, Malte Spielmann, Stephen A Murray, Cole Trapnell, Jay Shendure
A single-cell time-lapse of mouse prenatal development from gastrula to birth. Nature 626 (8001) (2024)
Chengxiang Qiu, Beth K Martin, Ian C Welsh, Riza M Daza, Truc-Mai Le, Xingfan Huang, Eva K Nichols, Megan L Taylor, Olivia Fulton, Diana R O'Day, Anne Roshella Gomes, Saskia Ilcisin, Sanjay Srivatsan, Xinxian Deng, Christine M Disteche, William Stafford Noble, Nobuhiko Hamazaki, Cecilia B Moens, David Kimelman, Junyue Cao, Alexander F Schier, Malte Spielmann, Stephen A Murray, Cole Trapnell, Jay Shendure
A single-cell time-lapse of mouse prenatal development from gastrula to birth. Nature (2024)
Chengxiang Qiu, Beth K Martin, Ian C Welsh, Riza M Daza, Truc-Mai Le, Xingfan Huang, Eva K Nichols, Megan L Taylor, Olivia Fulton, Diana R O'Day, Anne Roshella Gomes, Saskia Ilcisin, Sanjay Srivatsan, Xinxian Deng, Christine M Disteche, William Stafford Noble, Nobuhiko Hamazaki, Cecilia B Moens, David Kimelman, Junyue Cao, Alexander F Schier, Malte Spielmann, Stephen A Murray, Cole Trapnell, Jay Shendure
A single-cell time-lapse of mouse prenatal development from gastrula to birth. Nature 626 (8001) (2024)
Nobuhiko Hamazaki, Wei Yang, Connor A Kubo, Chengxiang Qiu, Beth K Martin, Riddhiman K Garge, Samuel G Regalado, Eva K Nichols, Sriram Pendyala, Nicholas Bradley, Douglas M Fowler, Choli Lee, Riza M Daza, Sanjay Srivatsan, Jay Shendure
Retinoic acid induces human gastruloids with posterior embryo-like structures. Nature cell biology (2024)
Chengxiang Qiu, Beth K Martin, Ian C Welsh, Riza M Daza, Truc-Mai Le, Xingfan Huang, Eva K Nichols, Megan L Taylor, Olivia Fulton, Diana R O'Day, Anne Roshella Gomes, Saskia Ilcisin, Sanjay Srivatsan, Xinxian Deng, Christine M Disteche, William Stafford Noble, Nobuhiko Hamazaki, Cecilia B Moens, David Kimelman, Junyue Cao, Alexander F Schier, Malte Spielmann, Stephen A Murray, Cole Trapnell, Jay Shendure
A single-cell time-lapse of mouse prenatal development from gastrula to birth. Nature 626 (8001) (2024)
Chengxiang Qiu, Beth K Martin, Ian C Welsh, Riza M Daza, Truc-Mai Le, Xingfan Huang, Eva K Nichols, Megan L Taylor, Olivia Fulton, Diana R O'Day, Anne Roshella Gomes, Saskia Ilcisin, Sanjay Srivatsan, Xinxian Deng, Christine M Disteche, William Stafford Noble, Nobuhiko Hamazaki, Cecilia B Moens, David Kimelman, Junyue Cao, Alexander F Schier, Malte Spielmann, Stephen A Murray, Cole Trapnell, Jay Shendure
A single-cell time-lapse of mouse prenatal development from gastrula to birth. Nature 626 (8001) (2024)
Sudarshan Pinglay, Jean-Beno Æt Lalanne, Riza M Daza, Jonas Koeppel, Xiaoyi Li, David S Lee, Jay Shendure
Multiplex generation and single cell analysis of structural variants in a mammalian genome. bioRxiv : the preprint server for biology (2024)
Bailey A T Weatherbee, Carlos W Gantner, Lisa K Iwamoto-Stohl, Riza M Daza, Nobuhiko Hamazaki, Jay Shendure, Magdalena Zernicka Goetz
Publisher Correction: Pluripotent stem cell-derived model of the post-implantation human embryo. Nature (2023)
Chengxiang Qiu, Beth K Martin, Ian C Welsh, Riza M Daza, Truc-Mai Le, Xingfan Huang, Eva K Nichols, Megan L Taylor, Olivia Fulton, Diana R Oâ Day, Anne Roshella Gomes, Saskia Ilcisin, Sanjay R Srivatsan, Xinxian Deng, Christine M Disteche, William Stafford Noble, Nobuhiko Hamazaki, Cecilia B Moens, David Kimelman, Junyue Cao, Alexander F Schier, Malte Spielmann, Stephen A Murray, Cole Trapnell, Jay Shendure
A single-cell transcriptional timelapse of mouse embryonic development, from gastrula to pup. bioRxiv : the preprint server for biology (2023)
Gregory T Booth, Riza M Daza, Sanjay R Srivatsan, José L McFaline-Figueroa, Rula Green Gladden, Scott N Furlan, Jay Shendure, Cole Trapnell
High-Capacity Sample Multiplexing for Single Cell Chromatin Accessibility Profiling. bioRxiv : the preprint server for biology (2023)
Mohammad Lotfollahi, Anna Klimovskaia Susmelj, Carlo de Donno, Leon Hetzel, Yuge Ji, Ignacio L Ibarra, Sanjay R Srivatsan, Mohsen Naghipourfar, Riza M Daza, Beth Martin, Jay Shendure, José L McFaline-Figueroa, Pierre Boyeau, F Alexander Wolf, Nafissa Yakubova, Stephan Günnemann, Cole Trapnell, David Lopez-Paz, Fabian Joachim Theis
Predicting cellular responses to complex perturbations in high-throughput screens. Molecular systems biology (2023)
Bailey A T Weatherbee, Carlos W Gantner, Lisa K Iwamoto-Stohl, Riza M Daza, Nobuhiko Hamazaki, Jay Shendure, Magdalena Zernicka Goetz
A model of the post-implantation human embryo derived from pluripotent stem cells. Nature (2023)
Diego Calderon, Ronnie Blecher-Gonen, Xingfan Huang, Stefano Secchia, James Kentro, Riza M Daza, Beth K Martin, Alessandro Dulja, Christoph Schaub, Cole Trapnell, Erica Larschan, Kate M Oâ Connor-Giles, Eileen E M Furlong, Jay Shendure
The continuum of Drosophila embryonic development at single-cell resolution. Science (New York, N.Y.) 377 (6606) (2022)
Silvia Domcke, Andrew J Hill, Riza M Daza, Junyue Cao, Diana R O'Day, Hannah A Pliner, Kimberly A Aldinger, Dmitry Pokholok, Fan Zhang, Jennifer H Milbank, Michael A Zager, Ian A Glass, Frank J Steemers, Daniel A Doherty, Cole Trapnell, Darren A Cusanovich, Jay Shendure
A human cell atlas of fetal chromatin accessibility. Science (New York, N.Y.) 370 (6518) (2020)
Junyue Cao, Diana R O'Day, Hannah A Pliner, Paul D Kingsley, Mei Deng, Riza M Daza, Michael A Zager, Kimberly A Aldinger, Ronnie Blecher-Gonen, Fan Zhang, Malte Spielmann, James Palis, Daniel A Doherty, Frank J Steemers, Ian A Glass, Cole Trapnell, Jay Shendure
A human cell atlas of fetal gene expression. Science (New York, N.Y.) 370 (6518) (2020)
Sanjay R Srivatsan, José L McFaline-Figueroa, Vijay Ramani, Lauren M Saunders, Junyue Cao, Jonathan S Packer, Hannah A Pliner, Dana L Jackson, Riza M Daza, Lena Christiansen, Fan Zhang, Frank Steemers, Jay Shendure, Cole Trapnell
Massively multiplex chemical transcriptomics at single-cell resolution. Science (New York, N.Y.) 367 (6473) (2019)
Junyue Cao, Darren A Cusanovich, Vijay Ramani, Delasa Aghamirzaie, Hannah A Pliner, Andrew J Hill, Riza M Daza, José L McFaline-Figueroa, Jonathan S Packer, Lena Christiansen, Frank J Steemers, Andrew C Adey, Cole Trapnell, Jay Shendure
Joint profiling of chromatin accessibility and gene expression in thousands of single cells. Science (New York, N.Y.) 361 (6409) (2018)