Samuel Chaffron

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 19

Top Topics

Multidrug Resistant

Autism Spectrum Disorder

Top Venues

Nature communications

Philosophical transactions of the Royal Society of London. Series B, Biological sciences

Science (New York, N.Y.)

BMC bioinformatics

This page only lists publications with an associated author ORCID identifier.

Publications

Marinna Gaudin, Damien Eveillard, Samuel Chaffron
Ecological associations distribution modelling of marine plankton at a global scale. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 379 (1909) (2024)
Nils Giordano, Marinna Gaudin, Camille Trottier, Erwan Delage, Charlotte Nef, Chris Bowler, Samuel Chaffron
Genome-scale community modelling reveals conserved metabolic cross-feedings in epipelagic bacterioplankton communities. Nature communications 15 (1) (2024)
Nils Giordano, Marinna Gaudin, Camille Trottier, Erwan Delage, Charlotte Nef, Chris Bowler, Samuel Chaffron
Genome-scale community modelling reveals conserved metabolic cross-feedings in epipelagic bacterioplankton communities. Nature communications 15 (1) (2024)
Marinna Gaudin, Damien Eveillard, Samuel Chaffron
Ecological associations distribution modelling of marine plankton at a global scale. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 379 (1909) (2024)
Nils Giordano, Marinna Gaudin, Camille Trottier, Erwan Delage, Charlotte Nef, Chris Bowler, Samuel Chaffron
Genome-scale community modelling reveals conserved metabolic cross-feedings in epipelagic bacterioplankton communities. Nature communications 15 (1) (2024)
Marinna Gaudin, Damien Eveillard, Samuel Chaffron
Ecological associations distribution modelling of marine plankton at a global scale. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 379 (1909) (2024)
Ina Maria Deutschmann, Erwan Delage, Caterina R Giner, Marta Sebastián, Julie Poulain, Javier Arístegui, Carlos M Duarte, Silvia G Acinas, Ramon Massana, Josep M Gasol, Damien Eveillard, Samuel Chaffron, Ramiro Logares
Disentangling microbial networks across pelagic zones in the tropical and subtropical global ocean. Nature communications 15 (1) (2024)
Ina Maria Deutschmann, Erwan Delage, Caterina R Giner, Marta Sebastián, Julie Poulain, Javier Arístegui, Carlos M Duarte, Silvia G Acinas, Ramon Massana, Josep M Gasol, Damien Eveillard, Samuel Chaffron, Ramiro Logares
Disentangling microbial networks across pelagic zones in the tropical and subtropical global ocean. Nature communications 15 (1) (2024)
Ina Maria Deutschmann, Erwan Delage, Caterina R Giner, Marta Sebastián, Julie Poulain, Javier Arístegui, Carlos M Duarte, Silvia G Acinas, Ramon Massana, Josep M Gasol, Damien Eveillard, Samuel Chaffron, Ramiro Logares
Disentangling microbial networks across pelagic zones in the tropical and subtropical global ocean. Nature communications 15 (1) (2024)
Till Röthig, Stacey M Trevathan-Tackett, Christian R Voolstra, Cliff Ross, Samuel Chaffron, Paul J Durack, Laura M Warmuth, Michael J Sweet
Human-induced salinity changes impact marine organisms and ecosystems. Global change biology (2023)
Janaina Rigonato, Marko Budinich, Alejandro A Murillo, Manoela C Brandão, Juan J Pierella Karlusich, Yawouvi Dodji Soviadan, Ann C Gregory, Hisashi Endo, Florian Kokoszka, Dean Vik, Nicolas Henry, Paul Frémont, Karine Labadie, Ahmed A Zayed, Céline Dimier, Marc Picheral, Sarah Searson, Julie Poulain, Stefanie Kandels, Stéphane Pesant, Eric Karsenti, null null, Peer Bork, Chris Bowler, Colomban de Vargas, Damien Eveillard, Marion Gehlen, Daniele Iudicone, Fabien Lombard, Hiroyuki Ogata, Lars Stemmann, Matthew B Sullivan, Shinichi Sunagawa, Patrick Wincker, Samuel Chaffron, Olivier Jaillon
Ocean-wide comparisons of mesopelagic planktonic community structures. ISME communications 3 (1) (2023)
Ahmed A Zayed, James M Wainaina, Guillermo Dominguez-Huerta, Eric Pelletier, Jiarong Guo, Mohamed Mohssen, Funing Tian, Akbar Adjie Pratama, Benjamin Bolduc, Olivier Zablocki, Dylan Cronin, Lindsey Solden, Erwan Delage, Adriana Alberti, Jean-Marc Aury, Quentin Carradec, Corinne Da Silva, Karine Labadie, Julie Poulain, Hans-Joachim Ruscheweyh, Guillem Salazar, Elan Shatoff, null null, Ralf Bundschuh, Kurt Fredrick, Laura S Kubatko, Samuel Chaffron, Alexander I Culley, Shinichi Sunagawa, J Thomas Beatty, Patrick Wincker, Matthew B Sullivan, Silvia G Acinas, Marcel Babin, Peer Bork, Emmanuel Boss, Chris Bowler, Guy Cochrane, Colomban de Vargas, Gabriel Gorsky, Lionel Guidi, Nigel Grimsley, Pascal Hingamp, Daniele Iudicone, Olivier Jaillon, Stefanie Kandels, Lee Karp-Boss, Eric Karsenti, Fabrice Not, Hiroyuki Ogata, Nicole Poulton, Stéphane Pesant, Christian Sardet, Sabrinia Speich, Lars Stemmann, Matthew B Sullivan, Shinichi Sungawa, Patrick Wincker
Cryptic and abundant marine viruses at the evolutionary origins of Earth's RNA virome. Science (New York, N.Y.) 376 (6589) (2022)
Guillermo Dominguez-Huerta, Ahmed A Zayed, James M Wainaina, Jiarong Guo, Funing Tian, Akbar Adjie Pratama, Benjamin Bolduc, Mohamed Mohssen, Olivier Zablocki, Eric Pelletier, Erwan Delage, Adriana Alberti, Jean-Marc Aury, Quentin Carradec, Corinne Da Silva, Karine Labadie, Julie Poulain, null null, Chris Bowler, Damien Eveillard, Lionel Guidi, Eric Karsenti, J Thomas Beatty, Hiroyuki Ogata, Patrick Wincker, Alexander I Culley, Samuel Chaffron, Matthew B Sullivan
Diversity and ecological footprint of Global Ocean RNA viruses. Science (New York, N.Y.) 376 (6598) (2022)
Jacques Gonzales, Justine Marchix, Laetitia Aymeric, Catherine Le Berre-Scoul, Johanna Zoppi, Philippe Bordron, Marie Burel, Laetitia Davidovic, Jean-Romain Richard, Alexandru Gaman, Florian Lejuste, Julie Z Brouillet, Françoise Le Vacon, Samuel Chaffron, Marion Leboyer, Hélène Boudin, Michel Neunlist
Fecal Supernatant from Adult with Autism Spectrum Disorder Alters Digestive Functions, Intestinal Epithelial Barrier, and Enteric Nervous System. Microorganisms 9 (8) (2021)
Samuel Chaffron, Erwan Delage, Marko Budinich, Damien Vintache, Nicolas Henry, Charlotte Nef, Mathieu Ardyna, Ahmed A Zayed, Pedro C Junger, Pierre E Galand, Connie Lovejoy, Alison E Murray, Hugo Sarmento, null null, Silvia G Acinas, Marcel Babin, Daniele Iudicone, Olivier Jaillon, Eric Karsenti, Patrick Wincker, Lee Karp-Boss, Matthew B Sullivan, Chris Bowler, Colomban de Vargas, Damien Eveillard
Environmental vulnerability of the global ocean epipelagic plankton community interactome. Science advances 7 (35) (2021)
Marta Royo-Llonch, Pablo Sánchez, Clara Ruiz-González, Guillem Salazar, Carlos Pedrós-Alió, Marta Sebastián, Karine Labadie, Lucas Paoli, Federico M Ibarbalz, Lucie Zinger, Benjamin Churcheward, null null, Samuel Chaffron, Damien Eveillard, Eric Karsenti, Shinichi Sunagawa, Patrick Wincker, Lee Karp-Boss, Chris Bowler, Silvia G Acinas
Compendium of 530 metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean. Nature microbiology 6 (12) (2021)
Mélanie Fouesnard, Johanna Zoppi, Mélanie Petera, Léa Le Gleau, Carole Migné, Fabienne Devime, Stéphanie Durand, Alexandre Benani, Samuel Chaffron, Véronique Douard, Gaëlle Boudry
Dietary switch to Western diet induces hypothalamic adaptation associated with gut microbiota dysbiosis in rats. International journal of obesity (2005) 45 (6) (2021)
Yajuan Lin, Carly M Moreno, Adrian Marchetti, Hugh W Ducklow, Oscar Schofield, Erwan Delage, Michael Meredith, Zuchuan Li, Damien Eveillard, Samuel Chaffron, Nicolas Cassar
Decline in plankton diversity and carbon flux with reduced sea ice extent along the Western Antarctic Peninsula. Nature communications 12 (1) (2021)
Johanna Zoppi, Jean-François Guillaume, Michel Neunlist, Samuel Chaffron
MiBiOmics: an interactive web application for multi-omics data exploration and integration. BMC bioinformatics 22 (1) (2021)