Matthew B Sullivan

ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 55

Top Venues

Nature microbiology

Nature communications

ISME communications

Archives of virology

Ohio State University

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Ohio State University

United States

Associate Professor :: Microbiology and Civil, Environmental and Geodetic Engineering

Publications

Joanna Warwick-Dugdale, Funing Tian, Michelle L Michelsen, Dylan R Cronin, Karen Moore, Audrey Farbos, Lauren Chittick, Ashley G Bell, Ahmed A Zayed, Holger H Buchholz, Luis M Bolanos, Rachel J Parsons, Michael J Allen, Matthew B Sullivan, Ben Temperton
Long-read powered viral metagenomics in the oligotrophic Sargasso Sea. Nature communications 15 (1) (2024)
Alice Baek, Ga-Eun Lee, Sarah Golconda, Asif Rayhan, Anastasios A Manganaris, Shuliang Chen, Nagaraja Tirumuru, Hannah Yu, Shihyoung Kim, Christopher Kimmel, Olivier Zablocki, Matthew B Sullivan, Balasubrahmanyam Addepalli, Li Wu, Sanggu Kim
Single-molecule epitranscriptomic analysis of full-length HIV-1 RNAs reveals functional roles of site-specific m 6 As. Nature microbiology 9 (5) (2024)
Bridget B McGivern, Dylan R Cronin, Jared B Ellenbogen, Mikayla A Borton, Eleanor L Knutson, Viviana Freire-Zapata, John A Bouranis, Lukas Bernhardt, Alma I Hernandez, Rory M Flynn, Reed Woyda, Alexandra B Cory, Rachel M Wilson, Jeffrey P Chanton, Benjamin J Woodcroft, Jessica Gilman Ernakovich, Malak M Tfaily, Matthew B Sullivan, Gene W Tyson, Virginia I Rich, Ann E Hagerman, Kelly C Wrighton
Microbial polyphenol metabolism is part of the thawing permafrost carbon cycle. Nature microbiology 9 (6) (2024)
Alice Baek, Ga-Eun Lee, Sarah Golconda, Asif Rayhan, Anastasios A Manganaris, Shuliang Chen, Nagaraja Tirumuru, Hannah Yu, Shihyoung Kim, Christopher Kimmel, Olivier Zablocki, Matthew B Sullivan, Balasubrahmanyam Addepalli, Li Wu, Sanggu Kim
Single-molecule epitranscriptomic analysis of full-length HIV-1 RNAs reveals functional roles of site-specific m 6 As. Nature microbiology 9 (5) (2024)
Zhi-Ping Zhong, Jingjie Du, Stephan Köstlbacher, Petra Pjevac, Sandi Orlić, Matthew B Sullivan
Viral potential to modulate microbial methane metabolism varies by habitat. Nature communications 15 (1) (2024)
Zhi-Ping Zhong, Jingjie Du, Stephan Köstlbacher, Petra Pjevac, Sandi Orlić, Matthew B Sullivan
Viral potential to modulate microbial methane metabolism varies by habitat. Nature communications 15 (1) (2024)
Alice Baek, Ga-Eun Lee, Sarah Golconda, Asif Rayhan, Anastasios A Manganaris, Shuliang Chen, Nagaraja Tirumuru, Hannah Yu, Shihyoung Kim, Christopher Kimmel, Olivier Zablocki, Matthew B Sullivan, Balasubrahmanyam Addepalli, Li Wu, Sanggu Kim
Single-molecule epitranscriptomic analysis of full-length HIV-1 RNAs reveals functional roles of site-specific m 6 As. Nature microbiology 9 (5) (2024)
Alice Baek, Ga-Eun Lee, Sarah Golconda, Asif Rayhan, Anastasios A Manganaris, Shuliang Chen, Nagaraja Tirumuru, Hannah Yu, Shihyoung Kim, Christopher Kimmel, Olivier Zablocki, Matthew B Sullivan, Balasubrahmanyam Addepalli, Li Wu, Sanggu Kim
Single-molecule epitranscriptomic analysis of full-length HIV-1 RNAs reveals functional roles of site-specific m 6 As. Nature microbiology (2024)
Zhi-Ping Zhong, Jingjie Du, Stephan Köstlbacher, Petra Pjevac, Sandi Orlić, Matthew B Sullivan
Viral potential to modulate microbial methane metabolism varies by habitat. Nature communications 15 (1) (2024)
Joanna Warwick-Dugdale, Funing Tian, Michelle L Michelsen, Dylan R Cronin, Karen Moore, Audrey Farbos, Lauren Chittick, Ashley G Bell, Ahmed A Zayed, Holger H Buchholz, Luis M Bolanos, Rachel J Parsons, Michael J Allen, Matthew B Sullivan, Ben Temperton
Long-read powered viral metagenomics in the oligotrophic Sargasso Sea. Nature communications 15 (1) (2024)
Alice Baek, Ga-Eun Lee, Sarah Golconda, Asif Rayhan, Anastasios A Manganaris, Shuliang Chen, Nagaraja Tirumuru, Hannah Yu, Shihyoung Kim, Christopher Kimmel, Olivier Zablocki, Matthew B Sullivan, Balasubrahmanyam Addepalli, Li Wu, Sanggu Kim
Single-molecule epitranscriptomic analysis of full-length HIV-1 RNAs reveals functional roles of site-specific m 6 As. Nature microbiology 9 (5) (2024)
Bridget B McGivern, Dylan R Cronin, Jared B Ellenbogen, Mikayla A Borton, Eleanor L Knutson, Viviana Freire-Zapata, John A Bouranis, Lukas Bernhardt, Alma I Hernandez, Rory M Flynn, Reed Woyda, Alexandra B Cory, Rachel M Wilson, Jeffrey P Chanton, Benjamin J Woodcroft, Jessica Gilman Ernakovich, Malak M Tfaily, Matthew B Sullivan, Gene W Tyson, Virginia I Rich, Ann E Hagerman, Kelly C Wrighton
Microbial polyphenol metabolism is part of the thawing permafrost carbon cycle. Nature microbiology 9 (6) (2024)
Zhi-Ping Zhong, Jingjie Du, Stephan Köstlbacher, Petra Pjevac, Sandi Orlić, Matthew B Sullivan
Viral potential to modulate microbial methane metabolism varies by habitat. Nature communications 15 (1) (2024)
Bridget B McGivern, Dylan R Cronin, Jared B Ellenbogen, Mikayla A Borton, Eleanor L Knutson, Viviana Freire-Zapata, John A Bouranis, Lukas Bernhardt, Alma I Hernandez, Rory M Flynn, Reed Woyda, Alexandra B Cory, Rachel M Wilson, Jeffrey P Chanton, Benjamin J Woodcroft, Jessica Gilman Ernakovich, Malak M Tfaily, Matthew B Sullivan, Gene W Tyson, Virginia I Rich, Ann E Hagerman, Kelly C Wrighton
Microbial polyphenol metabolism is part of the thawing permafrost carbon cycle. Nature microbiology 9 (6) (2024)
Bridget B McGivern, Dylan R Cronin, Jared B Ellenbogen, Mikayla A Borton, Eleanor L Knutson, Viviana Freire-Zapata, John A Bouranis, Lukas Bernhardt, Alma I Hernandez, Rory M Flynn, Reed Woyda, Alexandra B Cory, Rachel M Wilson, Jeffrey P Chanton, Benjamin J Woodcroft, Jessica Gilman Ernakovich, Malak M Tfaily, Matthew B Sullivan, Gene W Tyson, Virginia I Rich, Ann E Hagerman, Kelly C Wrighton
Microbial polyphenol metabolism is part of the thawing permafrost carbon cycle. Nature microbiology 9 (6) (2024)
Alice Baek, Ga-Eun Lee, Sarah Golconda, Asif Rayhan, Anastasios A Manganaris, Shuliang Chen, Nagaraja Tirumuru, Hannah Yu, Shihyoung Kim, Christopher Kimmel, Olivier Zablocki, Matthew B Sullivan, Balasubrahmanyam Addepalli, Li Wu, Sanggu Kim
Single-molecule epitranscriptomic analysis of full-length HIV-1 RNAs reveals functional roles of site-specific m 6 As. Nature microbiology (2024)
Bridget B McGivern, Dylan R Cronin, Jared B Ellenbogen, Mikayla A Borton, Eleanor L Knutson, Viviana Freire-Zapata, John A Bouranis, Lukas Bernhardt, Alma I Hernandez, Rory M Flynn, Reed Woyda, Alexandra B Cory, Rachel M Wilson, Jeffrey P Chanton, Benjamin J Woodcroft, Jessica Gilman Ernakovich, Malak M Tfaily, Matthew B Sullivan, Gene W Tyson, Virginia I Rich, Ann E Hagerman, Kelly C Wrighton
Microbial polyphenol metabolism is part of the thawing permafrost carbon cycle. Nature microbiology (2024)
Janaina Rigonato, Marko Budinich, Alejandro A Murillo, Manoela C Brandão, Juan J Pierella Karlusich, Yawouvi Dodji Soviadan, Ann C Gregory, Hisashi Endo, Florian Kokoszka, Dean Vik, Nicolas Henry, Paul Frémont, Karine Labadie, Ahmed A Zayed, Céline Dimier, Marc Picheral, Sarah Searson, Julie Poulain, Stefanie Kandels, Stéphane Pesant, Eric Karsenti, null null, Peer Bork, Chris Bowler, Colomban de Vargas, Damien Eveillard, Marion Gehlen, Daniele Iudicone, Fabien Lombard, Hiroyuki Ogata, Lars Stemmann, Matthew B Sullivan, Shinichi Sunagawa, Patrick Wincker, Samuel Chaffron, Olivier Jaillon
Ocean-wide comparisons of mesopelagic planktonic community structures. ISME communications 3 (1) (2023)
Ming Yan, Akbar Adjie Pratama, Sripoorna Somasundaram, Zongjun Li, Yu Jiang, Matthew B Sullivan, Zhongtang Yu
Interrogating the viral dark matter of the rumen ecosystem with a global virome database. Nature communications 14 (1) (2023)
Dann Turner, Andrey N Shkoporov, Cédric Lood, Andrew D Millard, Andrew D Millard, Poliane Alfenas-Zerbini, Leonardo Joaquim van Zyl, Ramy Karam Aziz, Hanna M Oksanen, Minna M Poranen, Andrew M Kropinski, Jakub Barylski, J Rodney Brister, Nina Chanisvili, Robert A Edwards, François Enault, Annika Gillis, Petar Knezevic, Mart Krupovic, D İpek Kurtbӧke, Alla I Kushkina, Rob Lavigne, Susan M Lehman, Małgorzata B Łobocka, Cristina Moraru, Andrea Moreno Switt, Vera Morozova, Andrew M Kropinski, Alejandro Reyes Muñoz, Janis Rumnieks, B L Sarkar, Matthew B Sullivan, Jumpei Uchiyama, Johannes Wittmann, Yi-Gang Tong, Evelien M Adriaenssens
Abolishment of morphology-based taxa and change to binomial species names: 2022 taxonomy update of the ICTV bacterial viruses subcommittee. Archives of virology 168 (2) (2023)
Dann Turner, Andrey N Shkoporov, Cédric Lood, Andrew D Millard, Andrew D Millard, Poliane Alfenas-Zerbini, Leonardo Joaquim van Zyl, Ramy Karam Aziz, Hanna M Oksanen, Minna M Poranen, Andrew M Kropinski, Jakub Barylski, J Rodney Brister, Nina Chanisvili, Robert A Edwards, François Enault, Annika Gillis, Petar Knezevic, Mart Krupovic, D İpek Kurtbӧke, Alla I Kushkina, Rob Lavigne, Susan M Lehman, Małgorzata B Łobocka, Cristina Moraru, Andrea Moreno Switt, Vera Morozova, Andrew M Kropinski, Alejandro Reyes Muñoz, Janis Rumnieks, B L Sarkar, Matthew B Sullivan, Jumpei Uchiyama, Johannes Wittmann, Yi-Gang Tong, Evelien M Adriaenssens
Abolishment of morphology-based taxa and change to binomial species names: 2022 taxonomy update of the ICTV bacterial viruses subcommittee. Archives of virology 168 (2) (2023)
Eric J Armstrong, Julie Lê-Hoang, Quentin Carradec, Jean-Marc Aury, Benjamin Noel, Benjamin C C Hume, Christian R Voolstra, Julie Poulain, Caroline Belser, David A Paz García, Corinne Cruaud, Karine Labadie, Corinne Da Silva, Clémentine Moulin, Emilie Boissin, Guillaume Bourdin, Guillaume Iwankow, Sarah Romac, Sylvain Agostini, Bernard Banaigs, Emmanuel S Boss, Chris Bowler, Colomban de Vargas, Eric Douville, J Michel Flores, Didier Forcioli, Paola Furla, Pierre E Galand, Eric Gilson, Fabien Lombard, Stéphane Pesant, Stéphanie Reynaud, Matthew B Sullivan, Shinichi Sunagawa, Olivier P Thomas, Romain Troublé, Rebecca L Vega Thurber, Didier Zoccola, Serge Planes, Denis Allemand, Patrick Wincker
Host transcriptomic plasticity and photosymbiotic fidelity underpin Pocillopora acclimatization across thermal regimes in the Pacific Ocean. Nature communications 14 (1) (2023)
Dann Turner, Andrey N Shkoporov, Cédric Lood, Andrew D Millard, Andrew D Millard, Poliane Alfenas-Zerbini, Leonardo Joaquim van Zyl, Ramy Karam Aziz, Hanna M Oksanen, Minna M Poranen, Andrew M Kropinski, Jakub Barylski, J Rodney Brister, Nina Chanisvili, Robert A Edwards, François Enault, Annika Gillis, Petar Knezevic, Mart Krupovic, D İpek Kurtbӧke, Alla I Kushkina, Rob Lavigne, Susan M Lehman, Małgorzata B Łobocka, Cristina Moraru, Andrea Moreno Switt, Vera Morozova, Andrew M Kropinski, Alejandro Reyes Muñoz, Janis Rumnieks, B L Sarkar, Matthew B Sullivan, Jumpei Uchiyama, Johannes Wittmann, Yi-Gang Tong, Evelien M Adriaenssens
Abolishment of morphology-based taxa and change to binomial species names: 2022 taxonomy update of the ICTV bacterial viruses subcommittee. Archives of virology 168 (2) (2023)
Dann Turner, Andrey N Shkoporov, Cédric Lood, Andrew D Millard, Andrew D Millard, Poliane Alfenas-Zerbini, Leonardo Joaquim van Zyl, Ramy Karam Aziz, Hanna M Oksanen, Minna M Poranen, Andrew M Kropinski, Jakub Barylski, J Rodney Brister, Nina Chanisvili, Robert A Edwards, François Enault, Annika Gillis, Petar Knezevic, Mart Krupovic, D İpek Kurtbӧke, Alla I Kushkina, Rob Lavigne, Susan M Lehman, Małgorzata B Łobocka, Cristina Moraru, Andrea Moreno Switt, Vera Morozova, Andrew M Kropinski, Alejandro Reyes Muñoz, Janis Rumnieks, B L Sarkar, Matthew B Sullivan, Jumpei Uchiyama, Johannes Wittmann, Yi-Gang Tong, Evelien M Adriaenssens
Abolishment of morphology-based taxa and change to binomial species names: 2022 taxonomy update of the ICTV bacterial viruses subcommittee. Archives of virology 168 (2) (2023)
Ahmed A Zayed, James M Wainaina, Guillermo Dominguez-Huerta, Eric Pelletier, Jiarong Guo, Mohamed Mohssen, Funing Tian, Akbar Adjie Pratama, Benjamin Bolduc, Olivier Zablocki, Dylan Cronin, Lindsey Solden, Erwan Delage, Adriana Alberti, Jean-Marc Aury, Quentin Carradec, Corinne Da Silva, Karine Labadie, Julie Poulain, Hans-Joachim Ruscheweyh, Guillem Salazar, Elan Shatoff, null null, Ralf Bundschuh, Kurt Fredrick, Laura S Kubatko, Samuel Chaffron, Alexander I Culley, Shinichi Sunagawa, J Thomas Beatty, Patrick Wincker, Matthew B Sullivan, Silvia G Acinas, Marcel Babin, Peer Bork, Emmanuel Boss, Chris Bowler, Guy Cochrane, Colomban de Vargas, Gabriel Gorsky, Lionel Guidi, Nigel Grimsley, Pascal Hingamp, Daniele Iudicone, Olivier Jaillon, Stefanie Kandels, Lee Karp-Boss, Eric Karsenti, Fabrice Not, Hiroyuki Ogata, Nicole Poulton, Stéphane Pesant, Christian Sardet, Sabrinia Speich, Lars Stemmann, Matthew B Sullivan, Shinichi Sungawa, Patrick Wincker
Cryptic and abundant marine viruses at the evolutionary origins of Earth's RNA virome. Science (New York, N.Y.) 376 (6589) (2022)
Mary Ann Moran, Elizabeth B Kujawinski, William F Schroer, Shady A Amin, Nicholas R Bates, Erin M Bertrand, Rogier Braakman, C Titus Brown, Markus W Covert, Scott C Doney, Sonya T Dyhrman, Arthur S Edison, A Murat Eren, Naomi M Levine, Liang Li, Avena Clara Ross, Mak A Saito, Alyson E Santoro, Daniel Segrè, Ashley Shade, Matthew B Sullivan, Assaf Vardi
Microbial metabolites in the marine carbon cycle. Nature microbiology 7 (4) (2022)
Guillermo Dominguez-Huerta, Ahmed A Zayed, James M Wainaina, Jiarong Guo, Funing Tian, Akbar Adjie Pratama, Benjamin Bolduc, Mohamed Mohssen, Olivier Zablocki, Eric Pelletier, Erwan Delage, Adriana Alberti, Jean-Marc Aury, Quentin Carradec, Corinne Da Silva, Karine Labadie, Julie Poulain, null null, Chris Bowler, Damien Eveillard, Lionel Guidi, Eric Karsenti, J Thomas Beatty, Hiroyuki Ogata, Patrick Wincker, Alexander I Culley, Samuel Chaffron, Matthew B Sullivan
Diversity and ecological footprint of Global Ocean RNA viruses. Science (New York, N.Y.) 376 (6598) (2022)
Lucas Paoli, Hans-Joachim Ruscheweyh, Clarissa C Forneris, Florian Hubrich, Satria Kautsar, Agneya Bhushan, Alessandro Lotti, Quentin Clayssen, Guillem Salazar, Alessio Milanese, Charlotte I Carlström, Chrysa Papadopoulou, Daniel Gehrig, Mikhail Karasikov, Harun Mustafa, Martin Larralde, Laura M Carroll, Pablo Sánchez, Ahmed A Zayed, Dylan R Cronin, Silvia G Acinas, Peer Bork, Chris Bowler, Tom O Delmont, Josep M Gasol, Alvar D Gossert, André Kahles, Matthew B Sullivan, Patrick Wincker, Georg Zeller, Serina L Robinson, Jörn Piel, Shinichi Sunagawa
Biosynthetic potential of the global ocean microbiome. Nature 607 (7917) (2022)
Franziska Hufsky, Denis Beslic, Dimitri Boeckaerts, Sebastián Duchêne, Enrique González-Tortuero, Andreas J Gruber, Jiarong Guo, Daan Jansen, John Juma, Kunaphas Kongkitimanon, Antoni Luque, Muriel Ritsch, Gabriel Lencioni Lovate, Luca Nishimura, Célia Pas, Esteban Domingo, Emma B Hodcroft, Philippe Lemey, Matthew B Sullivan, Friedemann Weber, Fernando Gonzáles-Candelas, Sarah Krautwurst, Alba Pérez-Cataluña, Walter Randazzo, Gloria Sánchez, Manja Marz
The International Virus Bioinformatics Meeting 2022. Viruses 14 (5) (2022)
Ho Bin Jang, Lauren Chittick, Yueh-Fen Li, Olivier Zablocki, Courtney M Sanderson, Alfonso Carrillo, Ger van den Engh, Matthew B Sullivan
Viral tag and grow: a scalable approach to capture and characterize infectious virus-host pairs. ISME communications 2 (1) (2022)
Cristina Howard-Varona, Simon Roux, Benjamin P Bowen, Leslie P Silva, Rebecca K Lau, Sarah M Schwenck, Samuel Schwartz, Tanja Woyke, Trent R Northen, Matthew B Sullivan, Sheri A Floge
Protist impacts on marine cyanovirocell metabolism. ISME communications 2 (1) (2022)
Ann C Gregory, Kenji Gerhardt, Zhi-Ping Zhong, Benjamin Bolduc, Ben Temperton, Konstantinos T Konstantinidis, Matthew B Sullivan
MetaPop: a pipeline for macro- and microdiversity analyses and visualization of microbial and viral metagenome-derived populations. Microbiome 10 (1) (2022)
Noah W Sokol, Eric W Slessarev, Gianna L Marschmann, Alexa M Nicolas, Steven J Blazewicz, Eoin L Brodie, Mary K Firestone, Megan M Foley, Rachel Hestrin, Bruce A Hungate, Benjamin J Koch, Bram W G Stone, Matthew B Sullivan, Olivier Zablocki, null null, Jennifer Pett-Ridge
Life and death in the soil microbiome: how ecological processes influence biogeochemistry. Nature reviews. Microbiology 20 (7) (2022)
Charles Bachy, Charmaine C M Yung, David M Needham, Maria Consuelo Gazitúa, Simon Roux, Alexander J Limardo, Chang Jae Choi, Danielle M Jorgens, Matthew B Sullivan, Alexandra Z Worden
Viruses infecting a warm water picoeukaryote shed light on spatial co-occurrence dynamics of marine viruses and their hosts. The ISME journal 15 (11) (2021)
Sophie K Jurgensen, Simon Roux, Sarah M Schwenck, Frank J Stewart, Matthew B Sullivan, Jennifer R Brum
Viral community analysis in a marine oxygen minimum zone indicates increased potential for viral manipulation of microbial physiological state. The ISME journal (2021)
Benjamin Bolduc, Olivier Zablocki, Jiarong Guo, Ahmed A Zayed, Dean Vik, Paramvir Dehal, Elisha M Wood-Charlson, Adam Arkin, Nirav Merchant, Jennifer Pett-Ridge, Simon Roux, Matthew W Vaughn, Matthew B Sullivan
iVirus 2.0: Cyberinfrastructure-supported tools and data to power DNA virus ecology. ISME communications 1 (1) (2021)
Jiarong Guo, Ben Bolduc, Ahmed A Zayed, Arvind Varsani, Guillermo Dominguez-Huerta, Tom O Delmont, Akbar Adjie Pratama, M Consuelo Gazitúa, Dean Vik, Matthew B Sullivan, Simon Roux
VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses. Microbiome 9 (1) (2021)
Benjamin Bolduc, Olivier Zablocki, Jiarong Guo, Ahmed A Zayed, Dean Vik, Paramvir Dehal, Elisha M Wood-Charlson, Adam Arkin, Nirav Merchant, Jennifer Pett-Ridge, Simon Roux, Matthew W Vaughn, Matthew B Sullivan
iVirus 2.0: Cyberinfrastructure-supported tools and data to power DNA virus ecology. ISME communications 1 (1) (2021)
Samuel Chaffron, Erwan Delage, Marko Budinich, Damien Vintache, Nicolas Henry, Charlotte Nef, Mathieu Ardyna, Ahmed A Zayed, Pedro C Junger, Pierre E Galand, Connie Lovejoy, Alison E Murray, Hugo Sarmento, null null, Silvia G Acinas, Marcel Babin, Daniele Iudicone, Olivier Jaillon, Eric Karsenti, Patrick Wincker, Lee Karp-Boss, Matthew B Sullivan, Chris Bowler, Colomban de Vargas, Damien Eveillard
Environmental vulnerability of the global ocean epipelagic plankton community interactome. Science advances 7 (35) (2021)
Kristopher Kieft, Zhichao Zhou, Rika E Anderson, Alison Buchan, Barbara J Campbell, Steven James Hallam, Matthias Hess, Matthew B Sullivan, David A Walsh, Simon Roux, Karthik Anantharaman
Ecology of inorganic sulfur auxiliary metabolism in widespread bacteriophages. Nature communications 12 (1) (2021)
Silvia G Acinas, Pablo Sánchez, Guillem Salazar, Francisco Miguel Cornejo-Castillo, Marta Sebastián, Ramiro Logares, Marta Royo-Llonch, Lucas Paoli, Shinichi Sunagawa, Pascal Hingamp, Hiroyuki Ogata, Gipsi Lima-Mendez, Simon Roux, José M González, Jesús Maria Arrieta, Intikhab S Alam, Allan Kamau, Chris Bowler, Jeroen Raes, Stéphane Pesant, Peer Bork, Susana Agustí, Takashi Gojobori, Dolors Vaqué, Matthew B Sullivan, Carlos Pedrós-Alió, Ramon Massana, Carlos M Duarte, Josep M Gasol
Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities. Communications biology 4 (1) (2021)
Eric G Sakowski, Keith Arora-Williams, Funing Tian, Ahmed A Zayed, Olivier Zablocki, Matthew B Sullivan, Sarah P Preheim
Interaction dynamics and virus-host range for estuarine actinophages captured by epicPCR. Nature microbiology 6 (5) (2021)
Mart Krupovic, Dann Turner, Vera V Morozova, Michael Dyall-Smith, Hanna M Oksanen, Robert A Edwards, Bas E Dutilh, Susan M Lehman, Alejandro Reyes, Diana P Baquero, Matthew B Sullivan, Jumpei Uchiyama, Jesca Lukanga Nakavuma, Jakub Barylski, Mark J Young, Shi-Shen Du, Poliane Alfenas-Zerbini, Alla I Kushkina, Andrew M Kropinski, D İpek Kurtbӧke, J Rodney Brister, Cédric Lood, B L Sarkar, Yi-Gang Tong, Ying Liu, Li Huang, Johannes Wittmann, Nina Chanishvili, Leonardo Joaquim van Zyl, Janis Rumnieks, Tomohiro Mochizuki, Matti Jalasvuori, Ramy Karam Aziz, Małgorzata B Łobocka, Kenneth M Stedman, Andrey N Shkoporov, Annika Gillis, Peng Xu, François Enault, Petar Knezevic, Rob Lavigne, Sung-Keun Rhee, Virginija Cvirkaite-Krupovic, Cristina Moraru, Andrea I Moreno Switt, Minna M Poranen, Andrew D Millard, David Prangishvili, Evelien M Adriaenssens
Bacterial Viruses Subcommittee and Archaeal Viruses Subcommittee of the ICTV: update of taxonomy changes in 2021. Archives of virology 166 (11) (2021)
Hisashi Endo, Romain Blanc-Mathieu, Yanze Li, Guillem Salazar, Nicolas Henry, Karine Labadie, Colomban de Vargas, Matthew B Sullivan, Chris Bowler, Patrick Wincker, Lee Karp-Boss, Shinichi Sunagawa, Hiroyuki Ogata
Biogeography of marine giant viruses reveals their interplay with eukaryotes and ecological functions. Nature ecology & evolution 4 (12) (2020)
Cristina Howard-Varona, Morgan M Lindback, G Eric Bastien, Natalie Solonenko, Ahmed A Zayed, Ho Bin Jang, Bill Andreopoulos, Heather M Brewer, Tijana Glavina Del Rio, Joshua N Adkins, Subhadeep Paul, Matthew B Sullivan, Melissa B Duhaime
Phage-specific metabolic reprogramming of virocells. The ISME journal 14 (4) (2020)
Shinichi Sunagawa, Silvia G Acinas, Peer Bork, Chris Bowler, null null, Damien Eveillard, Gabriel Gorsky, Lionel Guidi, Daniele Iudicone, Eric Karsenti, Fabien Lombard, Hiroyuki Ogata, Stephane Pesant, Matthew B Sullivan, Patrick Wincker, Colomban de Vargas
Tara Oceans: towards global ocean ecosystems biology. Nature reviews. Microbiology 18 (8) (2020)
Maria Consuelo Gazitúa, Dean R Vik, Simon Roux, Ann C Gregory, Benjamin Bolduc, Brittany Widner, Margaret R Mulholland, Steven James Hallam, Osvaldo Ulloa, Matthew B Sullivan
Potential virus-mediated nitrogen cycling in oxygen-depleted oceanic waters. The ISME journal 15 (4) (2020)
Amy E Zimmerman, Cristina Howard-Varona, David M Needham, Seth G John, Alexandra Z Worden, Matthew B Sullivan, Jacob R Waldbauer, Maureen L Coleman
Metabolic and biogeochemical consequences of viral infection in aquatic ecosystems. Nature reviews. Microbiology 18 (1) (2019)
Serge Planes, Denis Allemand, Sylvain Agostini, Bernard Banaigs, Emilie Boissin, Emmanuel S Boss, Guillaume Bourdin, Chris Bowler, Eric Douville, J Michel Flores, Didier Forcioli, Paola Furla, Pierre E Galand, Jean-François Ghiglione, Eric Gilson, Fabien Lombard, Clémentine Moulin, Stéphane Pesant, Julie Poulain, Stéphanie Reynaud, Sarah Romac, Matthew B Sullivan, Shinichi Sunagawa, Olivier P Thomas, Romain Troublé, Colomban de Vargas, Rebecca L Vega Thurber, Christian R Voolstra, Patrick Wincker, Didier Zoccola, null null
The Tara Pacific expedition-A pan-ecosystemic approach of the "-omics" complexity of coral reef holobionts across the Pacific Ocean. PLoS biology 17 (9) (2019)
Ricardo Cavicchioli, William J Ripple, Kenneth N Timmis, Farooq Azam, Lars R Bakken, Matthew Baylis, Michael J Behrenfeld, Antje Boetius, Philip W Boyd, Aimée T Classen, Thomas W Crowther, Roberto Danovaro, Christine M Foreman, Jef Huisman, David A Hutchins, Janet K Jansson, David M Karl, Britt Koskella, David B Mark Welch, Jennifer B H Martiny, Mary Ann Moran, Victoria J Orphan, David S Reay, Justin V Remais, Virginia I Rich, Brajesh K Singh, Lisa Y Stein, Frank J Stewart, Matthew B Sullivan, Madeleine J H van Oppen, Scott C Weaver, Eric A Webb, Nicole Suzanne Webster
Scientists' warning to humanity: microorganisms and climate change. Nature reviews. Microbiology 17 (9) (2019)
Ho Bin Jang, Benjamin Bolduc, Olivier Zablocki, Jens H Kuhn, Simon Roux, Evelien M Adriaenssens, J Rodney Brister, Andrew M Kropinski, Mart Krupovic, Rob Lavigne, Dann Turner, Matthew B Sullivan
Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks. Nature biotechnology 37 (6) (2019)
Lindsey M Solden, Adrian E Naas, Simon Roux, Rebecca A Daly, William B Collins, Carrie D Nicora, Sam O Purvine, David W Hoyt, Julia Schückel, Bodil Jørgensen, William Willats, Donald E Spalinger, Jeffrey L Firkins, Mary S Lipton, Matthew B Sullivan, Phillip Byron Pope, Kelly C Wrighton
Interspecies cross-feeding orchestrates carbon degradation in the rumen ecosystem. Nature microbiology 3 (11) (2018)
Rebecca A Daly, Simon Roux, Mikayla A Borton, David M Morgan, Michael D Johnston, Anne E Booker, David W Hoyt, Tea Meulia, Richard A Wolfe, Andrea J Hanson, Paula J Mouser, Joseph D Moore, Kenneth Wunch, Matthew B Sullivan, Kelly C Wrighton, Michael J Wilkins
Viruses control dominant bacteria colonizing the terrestrial deep biosphere after hydraulic fracturing. Nature microbiology 4 (2) (2018)
Joanne B Emerson, Simon Roux, Jennifer R Brum, Benjamin Bolduc, Ben J Woodcroft, Ho Bin Jang, Caitlin M Singleton, Lindsey M Solden, Adrian E Naas, Joel A Boyd, Suzanne B Hodgkins, Rachel M Wilson, Gareth Trubl, Changsheng Li, Steve Frolking, Phillip Byron Pope, Kelly C Wrighton, Patrick M Crill, Jeffrey P Chanton, Scott R Saleska, Gene W Tyson, Virginia I Rich, Matthew B Sullivan
Host-linked soil viral ecology along a permafrost thaw gradient. Nature microbiology 3 (8) (2018)
Cristina Howard-Varona, Katherine R Hargreaves, Natalie E Solonenko, Lye Meng Markillie, Richard Allen White, Heather M Brewer, Charles Ansong, Galya Orr, Joshua N Adkins, Matthew B Sullivan
Multiple mechanisms drive phage infection efficiency in nearly identical hosts. The ISME journal 12 (6) (2018)

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Publication Activity (10 Years)

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Matthew B Sullivan