Thomas Sebastian Benedikt Schmidt (Thomas Sb Schmidt, Thomas Sebastian B Schmidt, Thomas Sebastian Schmidt, Thomas S B Schmidt, Schmidt Thomas S B)

ResearcherID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 31

Top Topics

Rheumatoid Arthritis Patients

Microbial Community

Quality Control

Top Venues

Nature medicine

Nature communications

Nucleic acids research

This page only lists publications with an associated author ORCID identifier.

Publications

Ayele Argaw-Denboba, Thomas Sebastian Benedikt Schmidt, Monica Di Giacomo, Bobby Ranjan, Saravanan Devendran, Eleonora Mastrorilli, Catrin T Lloyd, Danilo Pugliese, Violetta Paribeni, Juliette Dabin, Alessandra Pisaniello, Sergio Martin Espinola, Alvaro Crevenna, Subhanita Ghosh, Neil E Humphreys, Olga Boruc, Peter Sarkies, Michael Zimmermann, Peer Bork, Jamie A Hackett
Paternal microbiome perturbations impact offspring fitness. Nature (2024)
Ayele Argaw-Denboba, Thomas Sebastian Benedikt Schmidt, Monica Di Giacomo, Bobby Ranjan, Saravanan Devendran, Eleonora Mastrorilli, Catrin T Lloyd, Danilo Pugliese, Violetta Paribeni, Juliette Dabin, Alessandra Pisaniello, Sergio Martin Espinola, Alvaro Crevenna, Subhanita Ghosh, Neil E Humphreys, Olga Boruc, Peter Sarkies, Michael Zimmermann, Peer Bork, Jamie A Hackett
Paternal microbiome perturbations impact offspring fitness. Nature 629 (8012) (2024)
Ayele Argaw-Denboba, Thomas Sebastian Benedikt Schmidt, Monica Di Giacomo, Bobby Ranjan, Saravanan Devendran, Eleonora Mastrorilli, Catrin T Lloyd, Danilo Pugliese, Violetta Paribeni, Juliette Dabin, Alessandra Pisaniello, Sergio Martin Espinola, Alvaro Crevenna, Subhanita Ghosh, Neil E Humphreys, Olga Boruc, Peter Sarkies, Michael Zimmermann, Peer Bork, Jamie A Hackett
Paternal microbiome perturbations impact offspring fitness. Nature 629 (8012) (2024)
Ayele Argaw-Denboba, Thomas Sebastian Benedikt Schmidt, Monica Di Giacomo, Bobby Ranjan, Saravanan Devendran, Eleonora Mastrorilli, Catrin T Lloyd, Danilo Pugliese, Violetta Paribeni, Juliette Dabin, Alessandra Pisaniello, Sergio Martin Espinola, Alvaro Crevenna, Subhanita Ghosh, Neil E Humphreys, Olga Boruc, Peter Sarkies, Michael Zimmermann, Peer Bork, Jamie A Hackett
Paternal microbiome perturbations impact offspring fitness. Nature 629 (8012) (2024)
Ayele Argaw-Denboba, Thomas Sebastian Benedikt Schmidt, Monica Di Giacomo, Bobby Ranjan, Saravanan Devendran, Eleonora Mastrorilli, Catrin T Lloyd, Danilo Pugliese, Violetta Paribeni, Juliette Dabin, Alessandra Pisaniello, Sergio Martin Espinola, Alvaro Crevenna, Subhanita Ghosh, Neil E Humphreys, Olga Boruc, Peter Sarkies, Michael Zimmermann, Peer Bork, Jamie A Hackett
Paternal microbiome perturbations impact offspring fitness. Nature 629 (8012) (2024)
Ayele Argaw-Denboba, Thomas Sebastian Benedikt Schmidt, Monica Di Giacomo, Bobby Ranjan, Saravanan Devendran, Eleonora Mastrorilli, Catrin T Lloyd, Danilo Pugliese, Violetta Paribeni, Juliette Dabin, Alessandra Pisaniello, Sergio Martin Espinola, Alvaro Crevenna, Subhanita Ghosh, Neil E Humphreys, Olga Boruc, Peter Sarkies, Michael Zimmermann, Peer Bork, Jamie A Hackett
Paternal microbiome perturbations impact offspring fitness. Nature 629 (8012) (2024)
Ayele Argaw-Denboba, Thomas Sebastian Benedikt Schmidt, Monica Di Giacomo, Bobby Ranjan, Saravanan Devendran, Eleonora Mastrorilli, Catrin T Lloyd, Danilo Pugliese, Violetta Paribeni, Juliette Dabin, Alessandra Pisaniello, Sergio Martin Espinola, Alvaro Crevenna, Subhanita Ghosh, Neil E Humphreys, Olga Boruc, Peter Sarkies, Michael Zimmermann, Peer Bork, Jamie A Hackett
Paternal microbiome perturbations impact offspring fitness. Nature (2024)
Ayele Argaw-Denboba, Thomas Sebastian Benedikt Schmidt, Monica Di Giacomo, Bobby Ranjan, Saravanan Devendran, Eleonora Mastrorilli, Catrin T Lloyd, Danilo Pugliese, Violetta Paribeni, Juliette Dabin, Alessandra Pisaniello, Sergio Martin Espinola, Alvaro Crevenna, Subhanita Ghosh, Neil E Humphreys, Olga Boruc, Peter Sarkies, Michael Zimmermann, Peer Bork, Jamie A Hackett
Paternal microbiome perturbations impact offspring fitness. Nature 629 (8012) (2024)
Yiqian Duan, Santos-Júnior Célio Dias, Thomas Sebastian Benedikt Schmidt, Anthony Fullam, Breno L S de Almeida, Chengkai Zhu, Michael Kuhn, Xing-Ming Zhao, Peer Bork, Luis Pedro Coelho
A catalog of small proteins from the global microbiome. Nature communications 15 (1) (2024)
Ayele Argaw-Denboba, Thomas Sebastian Benedikt Schmidt, Monica Di Giacomo, Bobby Ranjan, Saravanan Devendran, Eleonora Mastrorilli, Catrin T Lloyd, Danilo Pugliese, Violetta Paribeni, Juliette Dabin, Alessandra Pisaniello, Sergio Martin Espinola, Alvaro Crevenna, Subhanita Ghosh, Neil E Humphreys, Olga Boruc, Peter Sarkies, Michael Zimmermann, Peer Bork, Jamie A Hackett
Paternal microbiome perturbations impact offspring fitness. Nature 629 (8012) (2024)
Ayele Argaw-Denboba, Thomas Sebastian Benedikt Schmidt, Monica Di Giacomo, Bobby Ranjan, Saravanan Devendran, Eleonora Mastrorilli, Catrin T Lloyd, Danilo Pugliese, Violetta Paribeni, Juliette Dabin, Alessandra Pisaniello, Sergio Martin Espinola, Alvaro Crevenna, Subhanita Ghosh, Neil E Humphreys, Olga Boruc, Peter Sarkies, Michael Zimmermann, Peer Bork, Jamie A Hackett
Paternal microbiome perturbations impact offspring fitness. Nature 629 (8012) (2024)
Ayele Argaw-Denboba, Thomas Sebastian Benedikt Schmidt, Monica Di Giacomo, Bobby Ranjan, Saravanan Devendran, Eleonora Mastrorilli, Catrin T Lloyd, Danilo Pugliese, Violetta Paribeni, Juliette Dabin, Alessandra Pisaniello, Sergio Martin Espinola, Alvaro Crevenna, Subhanita Ghosh, Neil E Humphreys, Olga Boruc, Peter Sarkies, Michael Zimmermann, Peer Bork, Jamie A Hackett
Paternal microbiome perturbations impact offspring fitness. Nature (2024)
Álvaro Rodríguez Del Río, Joaquín Giner-Lamia, Carlos P Cantalapiedra, Jorge Botas, Ziqi Deng, Ana Hernández-Plaza, Martí Munar-Palmer, Saray Santamaría-Hernando, José J Rodríguez-Herva, Hans-Joachim Ruscheweyh, Lucas Paoli, Thomas Sebastian Benedikt Schmidt, Shinichi Sunagawa, Peer Bork, Emilia López-Solanilla, Luis Pedro Coelho, Huerta-Cepas Jaime
Functional and evolutionary significance of unknown genes from uncultivated taxa. Nature (2023)
Álvaro Rodríguez Del Río, Joaquín Giner-Lamia, Carlos P Cantalapiedra, Jorge Botas, Ziqi Deng, Ana Hernández-Plaza, Martí Munar-Palmer, Saray Santamaría-Hernando, José J Rodríguez-Herva, Hans-Joachim Ruscheweyh, Lucas Paoli, Thomas Sebastian Benedikt Schmidt, Shinichi Sunagawa, Peer Bork, Emilia López-Solanilla, Luis Pedro Coelho, Huerta-Cepas Jaime
Functional and evolutionary significance of unknown genes from uncultivated taxa. Nature 626 (7998) (2023)
Álvaro Rodríguez Del Río, Joaquín Giner-Lamia, Carlos P Cantalapiedra, Jorge Botas, Ziqi Deng, Ana Hernández-Plaza, Martí Munar-Palmer, Saray Santamaría-Hernando, José J Rodríguez-Herva, Hans-Joachim Ruscheweyh, Lucas Paoli, Thomas Sebastian Benedikt Schmidt, Shinichi Sunagawa, Peer Bork, Emilia López-Solanilla, Luis Pedro Coelho, Huerta-Cepas Jaime
Functional and evolutionary significance of unknown genes from uncultivated taxa. Nature 626 (7998) (2023)
Santos-Júnior Célio Dias, Marcelo Der Torossian Torres, Yiqian Duan, Rodríguez Del Río Álvaro, Thomas Sebastian Benedikt Schmidt, Chong Hui, Anthony Fullam, Michael Kuhn, Zhu Chengkai, Houseman Amy, Somborski Jelena, Vines Anna, Xing-Ming Zhao, Peer Bork, Huerta-Cepas Jaime, de la Fuente-Nunez Cesar, Luis Pedro Coelho
Computational exploration of the global microbiome for antibiotic discovery. bioRxiv : the preprint server for biology (2023)
Sander Wuyts, Renato Jc Alves, Maria Zimmermann-Kogadeeva, Suguru Nishijima, Sonja Blasche, Marja Driessen, Philipp E Geyer, Rajna Hercog, Ece Kartal, Lisa Maier, Johannes B Müller, Sarela Garcia Santamarina, Thomas Sebastian Benedikt Schmidt, Daniel C Sevin, Anja Telzerow, Peter V Treit, Tobias Wenzel, Athanasios Typas, Kiran Raosaheb Patil, Matthias Mann, Michael Kuhn, Peer Bork
Consistency across multi-omics layers in a drug-perturbed gut microbial community. Molecular systems biology (2023)
Álvaro Rodríguez Del Río, Joaquín Giner-Lamia, Carlos P Cantalapiedra, Jorge Botas, Ziqi Deng, Ana Hernández-Plaza, Martí Munar-Palmer, Saray Santamaría-Hernando, José J Rodríguez-Herva, Hans-Joachim Ruscheweyh, Lucas Paoli, Thomas Sebastian Benedikt Schmidt, Shinichi Sunagawa, Peer Bork, Emilia López-Solanilla, Luis Pedro Coelho, Huerta-Cepas Jaime
Functional and evolutionary significance of unknown genes from uncultivated taxa. Nature 626 (7998) (2023)
Álvaro Rodríguez Del Río, Joaquín Giner-Lamia, Carlos P Cantalapiedra, Jorge Botas, Ziqi Deng, Ana Hernández-Plaza, Martí Munar-Palmer, Saray Santamaría-Hernando, José J Rodríguez-Herva, Hans-Joachim Ruscheweyh, Lucas Paoli, Thomas Sebastian Benedikt Schmidt, Shinichi Sunagawa, Peer Bork, Emilia López-Solanilla, Luis Pedro Coelho, Huerta-Cepas Jaime
Functional and evolutionary significance of unknown genes from uncultivated taxa. Nature 626 (7998) (2023)
Thomas Sebastian Benedikt Schmidt, Anthony Fullam, Pamela Ferretti, Askarbek Orakov, Oleksandr M Maistrenko, Hans-Joachim Ruscheweyh, Ivica Letunic, Yiqian Duan, Thea Van Rossum, Shinichi Sunagawa, Daniel R Mende, Robert D Finn, Michael Kuhn, Luis Pedro Coelho, Peer Bork
SPIRE: a Searchable, Planetary-scale mIcrobiome REsource. Nucleic acids research (2023)
Álvaro Rodríguez Del Río, Joaquín Giner-Lamia, Carlos P Cantalapiedra, Jorge Botas, Ziqi Deng, Ana Hernández-Plaza, Martí Munar-Palmer, Saray Santamaría-Hernando, José J Rodríguez-Herva, Hans-Joachim Ruscheweyh, Lucas Paoli, Thomas Sebastian Benedikt Schmidt, Shinichi Sunagawa, Peer Bork, Emilia López-Solanilla, Luis Pedro Coelho, Huerta-Cepas Jaime
Functional and evolutionary significance of unknown genes from uncultivated taxa. Nature 626 (7998) (2023)
Álvaro Rodríguez Del Río, Joaquín Giner-Lamia, Carlos P Cantalapiedra, Jorge Botas, Ziqi Deng, Ana Hernández-Plaza, Martí Munar-Palmer, Saray Santamaría-Hernando, José J Rodríguez-Herva, Hans-Joachim Ruscheweyh, Lucas Paoli, Thomas Sebastian Benedikt Schmidt, Shinichi Sunagawa, Peer Bork, Emilia López-Solanilla, Luis Pedro Coelho, Huerta-Cepas Jaime
Functional and evolutionary significance of unknown genes from uncultivated taxa. Nature (2023)
Álvaro Rodríguez Del Río, Joaquín Giner-Lamia, Carlos P Cantalapiedra, Jorge Botas, Ziqi Deng, Ana Hernández-Plaza, Martí Munar-Palmer, Saray Santamaría-Hernando, José J Rodríguez-Herva, Hans-Joachim Ruscheweyh, Lucas Paoli, Thomas Sebastian Benedikt Schmidt, Shinichi Sunagawa, Peer Bork, Emilia López-Solanilla, Luis Pedro Coelho, Huerta-Cepas Jaime
Functional and evolutionary significance of unknown genes from uncultivated taxa. Nature (2023)
Ece Kartal, Thomas Sebastian Benedikt Schmidt, Esther Molina-Montes, Sandra Rodríguez-Perales, Jakob Wirbel, Oleksandr M Maistrenko, Wasiu A Akanni, Bilal Alashkar Alhamwe, Renato Jc Alves, Alfredo Carrato, Hans-Peter Erasmus, Lidia Estudillo, Fabian Finkelmeier, Anthony Fullam, Anna M Glazek, Paulina Gómez-Rubio, Rajna Hercog, Ferris E Jung, Stefanie Kandels-Lewis, Stephan Kersting, Melanie Langheinrich, Mirari Márquez, Xavier Molero, Askarbek Orakov, Thea Van Rossum, Raul Torres-Ruíz, Anja Telzerow, Konrad Zych, null null, null null, Vladimir Benes, Georg Zeller, Jonel Trebicka, Francisco X Real, Núria Malats, Peer Bork
A faecal microbiota signature with high specificity for pancreatic cancer. Gut 71 (7) (2022)
Thomas Sebastian Benedikt Schmidt, Simone S Li, Oleksandr M Maistrenko, Wasiu A Akanni, Luis Pedro Coelho, Sibasish Dolai, Anthony Fullam, Anna M Glazek, Rajna Hercog, Hilde Herrema, Ferris Jung, Stefanie Kandels, Askarbek Orakov, Roman Thielemann, Moritz von Stetten, Thea Van Rossum, Vladimir Benes, Thomas J Borody, Willem Meindert de Vos, Cyriel Y Ponsioen, Max Nieuwdorp, Peer Bork
Drivers and determinants of strain dynamics following fecal microbiota transplantation. Nature medicine 28 (9) (2022)
Sebastien Fromentin, Sofia Kirke Forslund-Startceva, Kanta Chechi, Judith Aron-Wisnewsky, Rima Chakaroun, Trine Nielsen, Valentina Tremaroli, Boyang Ji, Edi Prifti, Antonis Myridakis, Julien Chilloux, Petros Andrikopoulos, Yong Fan, Michael T Olanipekun, Renato Jc Alves, Solia Adiouch, Noam Bar, Yeela Talmor-Barkan, Eugeni Belda, Robert Caesar, Luis Pedro Coelho, Gwen Falony, Soraya Fellahi, Pilar Galan, Nathalie Galleron, Gerard Helft, Lesley Hoyles, Richard Isnard, Emmanuelle Le Chatelier, Hanna Julienne, Lisa M Olsson, Helle Krogh Pedersen, Nicolas Pons, Benoit Quinquis, Christine Rouault, Hugo Roume, Joe-Elie Salem, Thomas Sebastian Benedikt Schmidt, Sara Vieira-Silva, Peishun Li, Maria Zimmermann-Kogadeeva, Christian Lewinter, Nadja B Sønderskov, Tue Haldor Hansen, Dominique Gauguier, Jens Peter Gøtze, Lars Valeur Køber, Ran Kornowski, Henrik Vestergaard, Torben Hansen, Jean-Daniel Zucker, Serge Hercberg, Ivica Letunic, Fredrik Bäckhed, Jean-Michel Oppert, Jens B Nielsen, Jeroen Raes, Peer Bork, Michael Stumvoll, Eran Segal, Karine Clement, Marc Emmanuel Dumas, Stanislav Dusko Ehrlich, Oluf Pedersen
Microbiome and metabolome features of the cardiometabolic disease spectrum. Nature medicine 28 (2) (2022)
Anthony Fullam, Ivica Letunic, Thomas Sebastian Benedikt Schmidt, Quinten R Ducarmon, Nicolai Karcher, Supriya Khedkar, Michael Kuhn, Martin Larralde, Oleksandr M Maistrenko, Lukas Malfertheiner, Alessio Milanese, Joao Frederico Matias Rodrigues, Claudia Sanchis-López, Christian Schudoma, Damian Szklarczyk, Shinichi Sunagawa, Georg Zeller, Huerta-Cepas Jaime, Christian von Mering, Peer Bork, Daniel R Mende
proGenomes3: approaching one million accurately and consistently annotated high-quality prokaryotic genomes. Nucleic acids research (2022)
Alessio Milanese, Daniel R Mende, Lucas Paoli, Guillem Salazar, Hans-Joachim Ruscheweyh, Miguelangel Cuenca, Pascal Hingamp, Renato Jc Alves, Paul Igor Costea, Luis Pedro Coelho, Thomas Sebastian Benedikt Schmidt, Alexandre Almeida, Alex L Mitchell, Robert D Finn, Jaime Huerta-Cepas, Peer Bork, Georg Zeller, Shinichi Sunagawa
Microbial abundance, activity and population genomic profiling with mOTUs2. Nature communications 10 (1) (2019)
Thomas Sebastian Benedikt Schmidt, Matthew R Hayward, Luis Pedro Coelho, Simone S Li, Paul I Costea, Anita Y Voigt, Jakob Wirbel, Oleksandr M Maistrenko, Renato Jc Alves, Emma Bergsten, Carine de Beaufort, Iradj Sobhani, Anna Heintz-Buschart, Shinichi Sunagawa, Georg Zeller, Paul Wilmes, Peer Bork
Extensive transmission of microbes along the gastrointestinal tract. eLife 8 (2019)
Irina Leonardi, Alexandra Gerstgrasser, Thomas Sebastian Benedikt Schmidt, Flora Nicholls, Bernhard Tewes, Roland Greinwald, Christian von Mering, Gerhard Rogler, Isabelle Frey-Wagner
Preventive Trichuris suis ova (TSO) treatment protects immunocompetent rabbits from DSS colitis but may be detrimental under conditions of immunosuppression. Scientific reports 7 (1) (2017)
Thomas Sebastian Benedikt Schmidt, João Frederico Matias Rodrigues, Christian von Mering
A family of interaction-adjusted indices of community similarity. The ISME journal 11 (3) (2016)