Sarah J Hainer

Pitt ID ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 34

Top Venues

Genome biology

Cancer research communications

bioRxiv : the preprint server for biology

Nature cell biology

University of Massachusetts Medical School

University of Pittsburgh (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Massachusetts Medical School

United States

Postdoctoral Fellow :: Molecular, Cell, and Cancer Biology

Education History

University of Pittsburgh

United States

PHD :: Biological Sciences

Publications

Coby Viner, Charles A Ishak, James Johnson, Nicolas J Walker, Hui Shi, Marcela K Sjöberg-Herrera, Shu Yi Shen, Santana M Lardo, David J Adams, Anne C Ferguson-Smith, Daniel D De Carvalho, Sarah J Hainer, Timothy L Bailey, Michael M Hoffman
Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet. Genome biology 25 (1) (2024)
Odette Verdejo-Torres, David C Klein, Lorena Novoa-Aponte, Jaime Carrazco-Carrillo, Denzel Bonilla-Pinto, Antonio Rivera, Fa'alataitaua Fitisemanu, Martha L Jiménez-González, Lyra Flinn, Aidan T Pezacki, Antonio Lanzirotti, Luis Antonio Ortiz-Frade, Christopher J Chang, Juan G Navea, Crysten E Blaby-Haas, Sarah J Hainer, Teresita Padilla-Benavides
Cysteine Rich Intestinal Protein 2 is a copper-responsive regulator of skeletal muscle differentiation. bioRxiv : the preprint server for biology (2024)
Coby Viner, Charles A Ishak, James Johnson, Nicolas J Walker, Hui Shi, Marcela K Sjöberg-Herrera, Shu Yi Shen, Santana M Lardo, David J Adams, Anne C Ferguson-Smith, Daniel D De Carvalho, Sarah J Hainer, Timothy L Bailey, Michael M Hoffman
Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet. Genome biology 25 (1) (2024)
Benjamin J Patty, Sarah J Hainer
Widespread impact of nucleosome remodelers on transcription at cis-regulatory elements. bioRxiv : the preprint server for biology (2024)
Benjamin J Patty, Sarah J Hainer
Widespread impact of nucleosome remodelers on transcription at cis-regulatory elements. bioRxiv : the preprint server for biology (2024)
Coby Viner, Charles A Ishak, James Johnson, Nicolas J Walker, Hui Shi, Marcela K Sjöberg-Herrera, Shu Yi Shen, Santana M Lardo, David J Adams, Anne C Ferguson-Smith, Daniel D De Carvalho, Sarah J Hainer, Timothy L Bailey, Michael M Hoffman
Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet. Genome biology 25 (1) (2024)
Coby Viner, Charles A Ishak, James Johnson, Nicolas J Walker, Hui Shi, Marcela K Sjöberg-Herrera, Shu Yi Shen, Santana M Lardo, David J Adams, Anne C Ferguson-Smith, Daniel D De Carvalho, Sarah J Hainer, Timothy L Bailey, Michael M Hoffman
Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet. Genome biology 25 (1) (2024)
Coby Viner, Charles A Ishak, James Johnson, Nicolas J Walker, Hui Shi, Marcela K Sjöberg-Herrera, Shu Yi Shen, Santana M Lardo, David J Adams, Anne C Ferguson-Smith, Daniel D De Carvalho, Sarah J Hainer, Timothy L Bailey, Michael M Hoffman
Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet. Genome biology 25 (1) (2024)
David C Klein, Santana M Lardo, Sarah J Hainer
The ncBAF Complex Regulates Transcription in AML Through H3K27ac Sensing by BRD9. Cancer research communications 4 (1) (2024)
Coby Viner, Charles A Ishak, James Johnson, Nicolas J Walker, Hui Shi, Marcela K Sjöberg-Herrera, Shu Yi Shen, Santana M Lardo, David J Adams, Anne C Ferguson-Smith, Daniel D De Carvalho, Sarah J Hainer, Timothy L Bailey, Michael M Hoffman
Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet. Genome biology 25 (1) (2024)
David C Klein, Santana M Lardo, Sarah J Hainer
The ncBAF Complex Regulates Transcription in AML Through H3K27ac Sensing by BRD9. Cancer research communications 4 (1) (2024)
Coby Viner, Charles A Ishak, James Johnson, Nicolas J Walker, Hui Shi, Marcela K Sjöberg-Herrera, Shu Yi Shen, Santana M Lardo, David J Adams, Anne C Ferguson-Smith, Daniel D De Carvalho, Sarah J Hainer, Timothy L Bailey, Michael M Hoffman
Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet. Genome biology 25 (1) (2024)
Coby Viner, Charles A Ishak, James Johnson, Nicolas J Walker, Hui Shi, Marcela K Sjöberg-Herrera, Shu Yi Shen, Santana M Lardo, David J Adams, Anne C Ferguson-Smith, Daniel D De Carvalho, Sarah J Hainer, Timothy L Bailey, Michael M Hoffman
Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet. Genome biology 25 (1) (2024)
Coby Viner, Charles A Ishak, James Johnson, Nicolas J Walker, Hui Shi, Marcela K Sjöberg-Herrera, Shu Yi Shen, Santana M Lardo, David J Adams, Anne C Ferguson-Smith, Daniel D De Carvalho, Sarah J Hainer, Timothy L Bailey, Michael M Hoffman
Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet. Genome biology 25 (1) (2024)
Coby Viner, Charles A Ishak, James Johnson, Nicolas J Walker, Hui Shi, Marcela K Sjöberg-Herrera, Shu Yi Shen, Santana M Lardo, David J Adams, Anne C Ferguson-Smith, Daniel D De Carvalho, Sarah J Hainer, Timothy L Bailey, Michael M Hoffman
Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet. Genome biology 25 (1) (2024)
David C Klein, Santana M Lardo, Sarah J Hainer
The ncBAF Complex Regulates Transcription in AML Through H3K27ac Sensing by BRD9. Cancer research communications 4 (1) (2024)
David C Klein, Santana M Lardo, Sarah J Hainer
The ncBAF Complex Regulates Transcription in AML Through H3K27ac Sensing by BRD9. Cancer research communications 4 (1) (2024)
Odette Verdejo-Torres, David C Klein, Lorena Novoa-Aponte, Jaime Carrazco-Carrillo, Denzel Bonilla-Pinto, Antonio Rivera, Fa'alataitaua Fitisemanu, Martha L Jiménez-González, Lyra Flinn, Aidan T Pezacki, Antonio Lanzirotti, Luis Antonio Ortiz-Frade, Christopher J Chang, Juan G Navea, Crysten E Blaby-Haas, Sarah J Hainer, Teresita Padilla-Benavides
Cysteine Rich Intestinal Protein 2 is a copper-responsive regulator of skeletal muscle differentiation. bioRxiv : the preprint server for biology (2024)
Han Zou, Bradley Poore, Emily E Brown, Jieqi Qian, Bin Xie, Evridiki Asimakidou, Vladislav Razskazovskiy, Deanna Ayrapetian, Vaibhav Sharma, Shunjin Xia, Fei Liu, Apeng Chen, Yongchang Guan, Zhengwei Li, Siyi Wanggou, Olivier Saulnier, Michelle Ly, Wendy Fellows-Mayle, Guifa Xi, Tadanori Tomita, Adam C Resnick, Stephen C Mack, Eric H Raabe, Charles G Eberhart, Dandan Sun, Beth E Stronach, Sameer Agnihotri, Gary Kohanbash, Songjian Lu, Karl Herrup, Jeremy N Rich, George K Gittes, Alberto Broniscer, Zhongliang Hu, Xuejun Li, Ian F Pollack, Robert M Friedlander, Sarah J Hainer, Michael D Taylor, Baoli Hu
A neurodevelopmental epigenetic programme mediated by SMARCD3-DAB1-Reelin signalling is hijacked to promote medulloblastoma metastasis. Nature cell biology 25 (3) (2023)
Han Zou, Bradley Poore, Emily E Brown, Jieqi Qian, Bin Xie, Evridiki Asimakidou, Vladislav Razskazovskiy, Deanna Ayrapetian, Vaibhav Sharma, Shunjin Xia, Fei Liu, Apeng Chen, Yongchang Guan, Zhengwei Li, Siyi Wanggou, Olivier Saulnier, Michelle Ly, Wendy Fellows-Mayle, Guifa Xi, Tadanori Tomita, Adam C Resnick, Stephen C Mack, Eric H Raabe, Charles G Eberhart, Dandan Sun, Beth E Stronach, Sameer Agnihotri, Gary Kohanbash, Songjian Lu, Karl Herrup, Jeremy N Rich, George K Gittes, Alberto Broniscer, Zhongliang Hu, Xuejun Li, Ian F Pollack, Robert M Friedlander, Sarah J Hainer, Michael D Taylor, Baoli Hu
A neurodevelopmental epigenetic programme mediated by SMARCD3-DAB1-Reelin signalling is hijacked to promote medulloblastoma metastasis. Nature cell biology 25 (3) (2023)
David C Klein, Santana M Lardo, Sarah J Hainer
The ncBAF complex regulates transcription in AML through H3K27ac sensing by BRD9. Cancer research communications (2023)
Bruce Nmezi, Guillermo Rodriguez Bey, Talia DeFrancesco Oranburg, Kseniia Dudnyk, Santana M Lardo, Nathan Herdman, Anastasia Jacko, Sandy Rubio, Emanuel Loeza Alcocer, Julia Kofler, Dongkyeong Kim, Julia Rankin, Emma Kivuva, Nicholas Gutowski, Katherine Schon, Jelle van den Ameele, Patrick F Chinnery, Sérgio B Sousa, Filipe Palavra, Camilo Toro, Filippo Pinto E Vairo, Jonas Saute, Lisa Pan, Murad Alturkustani, Robert Hammond, Francois Gros-Louis, Michael Gold, Yungki Park, Geneviève Bernard, Raili Raininko, Jian Zhou, Sarah J Hainer, Quasar Saleem Padiath
An oligodendrocyte silencer element underlies the pathogenic impact of lamin B1 structural variants. bioRxiv : the preprint server for biology (2023)
David C Klein, Santana M Lardo, Kurtis N McCannell, Sarah J Hainer
FACT regulates pluripotency through proximal and distal regulation of gene expression in murine embryonic stem cells. BMC biology 21 (1) (2023)
Han Zou, Bradley Poore, Emily E Brown, Jieqi Qian, Bin Xie, Evridiki Asimakidou, Vladislav Razskazovskiy, Deanna Ayrapetian, Vaibhav Sharma, Shunjin Xia, Fei Liu, Apeng Chen, Yongchang Guan, Zhengwei Li, Siyi Wanggou, Olivier Saulnier, Michelle Ly, Wendy Fellows-Mayle, Guifa Xi, Tadanori Tomita, Adam C Resnick, Stephen C Mack, Eric H Raabe, Charles G Eberhart, Dandan Sun, Beth E Stronach, Sameer Agnihotri, Gary Kohanbash, Songjian Lu, Karl Herrup, Jeremy N Rich, George K Gittes, Alberto Broniscer, Zhongliang Hu, Xuejun Li, Ian F Pollack, Robert M Friedlander, Sarah J Hainer, Michael D Taylor, Baoli Hu
A neurodevelopmental epigenetic programme mediated by SMARCD3-DAB1-Reelin signalling is hijacked to promote medulloblastoma metastasis. Nature cell biology (2023)
David C Klein, Santana M Lardo, Sarah J Hainer
The ncBAF complex regulates transcription in AML through H3K27ac sensing by BRD9. Cancer research communications (2023)
Han Zou, Bradley Poore, Emily E Brown, Jieqi Qian, Bin Xie, Evridiki Asimakidou, Vladislav Razskazovskiy, Deanna Ayrapetian, Vaibhav Sharma, Shunjin Xia, Fei Liu, Apeng Chen, Yongchang Guan, Zhengwei Li, Siyi Wanggou, Olivier Saulnier, Michelle Ly, Wendy Fellows-Mayle, Guifa Xi, Tadanori Tomita, Adam C Resnick, Stephen C Mack, Eric H Raabe, Charles G Eberhart, Dandan Sun, Beth E Stronach, Sameer Agnihotri, Gary Kohanbash, Songjian Lu, Karl Herrup, Jeremy N Rich, George K Gittes, Alberto Broniscer, Zhongliang Hu, Xuejun Li, Ian F Pollack, Robert M Friedlander, Sarah J Hainer, Michael D Taylor, Baoli Hu
A neurodevelopmental epigenetic programme mediated by SMARCD3-DAB1-Reelin signalling is hijacked to promote medulloblastoma metastasis. Nature cell biology 25 (3) (2023)
Sarvenaz Sarabipour, Sarah J Hainer, Feyza Nur Arslan, Charlotte M de Winde, Emily J Furlong, Natalia Z Bielczyk, Nafisa M Jadavji, Aparna P Shah, Sejal Davla
Building and sustaining mentor interactions as a mentee. The FEBS journal (2021)
Benjamin J Patty, Sarah J Hainer
Transcription factor chromatin profiling genome-wide using uliCUT&RUN in single cells and individual blastocysts. Nature protocols 16 (5) (2021)
Sarvenaz Sarabipour, Sarah J Hainer, Emily J Furlong, Nafisa M Jadavji, Charlotte M de Winde, Natalia Z Bielczyk, Aparna P Shah
Writing an effective and supportive recommendation letter. The FEBS journal (2021)
Benjamin J Patty, Sarah J Hainer
Non-Coding RNAs and Nucleosome Remodeling Complexes: An Intricate Regulatory Relationship. Biology 9 (8) (2020)
Kris Troy, Yang Liu, Sarah J Hainer
PathSTORM: a road to early cancer detection. Molecular & cellular oncology 7 (5) (2020)
Sarah J Hainer, Craig D Kaplan
Specialized RSC: Substrate Specificities for a Conserved Chromatin Remodeler. BioEssays : news and reviews in molecular, cellular and developmental biology 42 (7) (2020)
Jianquan Xu, Hongqiang Ma, Hongbin Ma, Wei Jiang, Christopher A Mela, Meihan Duan, Shimei Zhao, Chenxi Gao, Eun-Ryeong Hahm, Santana M Lardo, Kris Troy, Ming Sun, Reet Pai, Donna B Stolz, Lin Zhang, Shivendra Singh, Randall E Brand, Douglas J Hartman, Jing Hu, Sarah J Hainer, Yang Liu
Super-resolution imaging reveals the evolution of higher-order chromatin folding in early carcinogenesis. Nature communications 11 (1) (2020)
David C Klein, Sarah J Hainer
Genomic methods in profiling DNA accessibility and factor localization. Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 28 (1) (2019)

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Publication Activity (10 Years)

Top Topics

Top Venues

Sarah J Hainer