Sean Davis (S Davis)

Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2015-2023
Publications (10 Years): 9

Top Venues

Nature communications

bioRxiv : the preprint server for biology

F1000Research

Oncogene

University of Pittsburgh (PHD)

This page only lists publications with an associated author ORCID identifier.

Education History

University of Pittsburgh

United States

PHD :: Schools of Medicine and Public Health

Publications

Yizhou Peter Huang, Lauren Harmon, Eve Deering-Gardner, Xiaotu Ma, Josiah Harsh, Zhaoyu Xue, Hong Wen, Marcel Ramos, Sean Davis, Timothy J Triche
bamSliceR : cross-cohort variant and allelic bias analysis for rare variants and rare diseases. bioRxiv : the preprint server for biology (2023)
Richard J Abdill, Samantha P Graham, Vincent P Rubinetti, Frank Wolfgang Albert, Casey S Greene, Sean Davis, Ran Blekhman
Integration of 168,000 samples reveals global patterns of the human gut microbiome. bioRxiv : the preprint server for biology (2023)
Arkarachai Fungtammasan, Alexandra J Lee, Jaclyn N Taroni, Kurt Wheeler, Chen-Shan Chin, Sean Davis, Casey S Greene
Ten simple rules for large-scale data processing. PLoS computational biology 18 (2) (2022)
Sehyun Oh, Ludwig Geistlinger, Marcel Ramos, Daniel Blankenberg, Marius van den Beek, Jaclyn N Taroni, Vincent J Carey, Casey S Greene, Levi Waldron, Sean Davis
GenomicSuperSignature facilitates interpretation of RNA-seq experiments through robust, efficient comparison to public databases. Nature communications 13 (1) (2022)
Sehyun Oh, Jasmine Abdelnabi, Ragheed Al-Dulaimi, Ayush Aggarwal, Marcel Ramos, Sean Davis, Markus Riester, Levi Waldron
HGNChelper: identification and correction of invalid gene symbols for human and mouse. F1000Research 9 (2020)
Kerrie L Marie, Antonella Sassano, Howard H Yang, Aleksandra M Michalowski, Helen T Michael, Theresa Guo, Yien Che Tsai, Allan M Weissman, Maxwell P Lee, Lisa M Miller Jenkins, M Raza Zaidi, Eva Pérez-Guijarro, Chi-Ping Day, Kris Ylaya, Stephen M Hewitt, Nimit L Patel, Heinz Arnheiter, Sean Davis, Paul S Meltzer, Glenn Merlino, Pravin J Mishra
Melanoblast transcriptome analysis reveals pathways promoting melanoma metastasis. Nature communications 11 (1) (2020)
Sean Davis, Marcel Ramos, Lori Shepherd, Nitesh Turaga, Ludwig Geistlinger, Martin T Morgan, Benjamin Haibe-Kains, Levi Waldron
Orchestrating a community-developed computational workshop and accompanying training materials. F1000Research 7 (2018)
Y Liu-Chittenden, M Jain, K Gaskins, S Wang, M J Merino, S Kotian, S Kumar Gara, Sean Davis, L Zhang, E Kebebew
RARRES2 functions as a tumor suppressor by promoting β-catenin phosphorylation/degradation and inhibiting p38 phosphorylation in adrenocortical carcinoma. Oncogene 36 (25) (2017)
Frances T Hakim, Sarfraz Memon, Ping Jin, Matin M Imanguli, Huan Wang, Najibah Rehman, Xiao-Yi Yan, Jeremy Rose, Jacqueline W Mays, Susan Dhamala, Veena Kapoor, William Telford, John D Dickinson, Sean Davis, David Halverson, Haley B Naik, Kristin Baird, Daniel Fowler, David F Stroncek, Edward W Cowen, Steven Z Pavletic, Ronald E Gress
Upregulation of IFN-Inducible and Damage-Response Pathways in Chronic Graft-versus-Host Disease. Journal of immunology (Baltimore, Md. : 1950) 197 (9) (2016)
Wolfgang Huber, Vincent J Carey, Robert Gentleman, Simon Anders, Marc Carlson, Benilton S Carvalho, Hector Corrada Bravo, Sean Davis, Laurent Gatto, Thomas Girke, Raphael Gottardo, Florian Hahne, Kasper D Hansen, Rafael A Irizarry, Michael Lawrence, Michael I Love, James MacDonald, Valerie Obenchain, Andrzej K Oleś, Hervé Pagès, Alejandro Reyes, Paul Shannon, Gordon K Smyth, Dan Tenenbaum, Levi Waldron, Martin Morgan
Orchestrating high-throughput genomic analysis with Bioconductor. Nature methods 12 (2) (2015)

Sean Davis.css-eqlu8i{font-size:small;padding-left:4px;} (S Davis)

Publication Activity (10 Years)

Top Topics

Top Venues

Sean Davis (S Davis)