Keith A Crandall (Keith Crandall, K A Crandall)

Loop profile Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 58

Top Venues

Scientific reports

Viruses

Proceedings of the National Academy of Sciences of the United States of America

Nutrients

George Washington University

Washington University in Saint Louis School of Medicine (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

George Washington University

United States

Director :: Computational Biology Institute

Brigham Young University

United States

Professor & Chair :: Biology

Brigham Young University

United States

Assistant - Full Professor :: Zoology

University of Texas at Austin

United States

Postdoctoral Fellow :: Zoology

Education History

Washington University in Saint Louis School of Medicine

United States

PHD :: Biology and Biomedical Sciences

Publications

Luc De Meester, Ella Vázquez-Domínguez, Rees Kassen, Félix Forest, Mauricio R Bellon, Britt Koskella, Rosa A Scherson, Licia Colli, Andrew P Hendry, Keith A Crandall, Daniel P Faith, Craig J Starger, R Geeta, Hitoshi Araki, Ehsan M Dulloo, Caroline Souffreau, Sibylle Schroer, Marc T J Johnson
A link between evolution and society fostering the UN sustainable development goals. Evolutionary applications 17 (6) (2024)
S M Rafiqul Islam, Robel Ahmed, Farjana Sharmen, Md Mobarok Hossain, Kallyan Chakma, Afroza Akter Tanni, Md Ashikur Alim Akash, Mohammad Enayet Hossain, Mohammed Shah Nawaz Chowdhury, Md Habib Ullah Masum, Anwar Hossain, Shankar C Mandal, Keith A Crandall, Gholamali Rahnavard, S M Sharifuzzaman, Adnan Mannan
Genome sequence of white spot syndrome virus (WSSV) infecting cultured black tiger shrimp ( Penaeus monodon ) in Bangladesh. Microbiology resource announcements (2024)
S M Rafiqul Islam, Robel Ahmed, Farjana Sharmen, Md Mobarok Hossain, Kallyan Chakma, Afroza Akter Tanni, Md Ashikur Alim Akash, Mohammad Enayet Hossain, Mohammed Shah Nawaz Chowdhury, Md Habib Ullah Masum, Anwar Hossain, Shankar C Mandal, Keith A Crandall, Gholamali Rahnavard, S M Sharifuzzaman, Adnan Mannan
Genome sequence of white spot syndrome virus (WSSV) infecting cultured black tiger shrimp ( Penaeus monodon ) in Bangladesh. Microbiology resource announcements 13 (4) (2024)
S M Rafiqul Islam, Robel Ahmed, Farjana Sharmen, Md Mobarok Hossain, Kallyan Chakma, Afroza Akter Tanni, Md Ashikur Alim Akash, Mohammad Enayet Hossain, Mohammed Shah Nawaz Chowdhury, Md Habib Ullah Masum, Anwar Hossain, Shankar C Mandal, Keith A Crandall, Gholamali Rahnavard, S M Sharifuzzaman, Adnan Mannan
Genome sequence of white spot syndrome virus (WSSV) infecting cultured black tiger shrimp ( Penaeus monodon ) in Bangladesh. Microbiology resource announcements 13 (4) (2024)
Luc De Meester, Ella Vázquez-Domínguez, Rees Kassen, Félix Forest, Mauricio R Bellon, Britt Koskella, Rosa A Scherson, Licia Colli, Andrew P Hendry, Keith A Crandall, Daniel P Faith, Craig J Starger, R Geeta, Hitoshi Araki, Ehsan M Dulloo, Caroline Souffreau, Sibylle Schroer, Marc T J Johnson
A link between evolution and society fostering the UN sustainable development goals. Evolutionary applications 17 (6) (2024)
S M Rafiqul Islam, Robel Ahmed, Farjana Sharmen, Md Mobarok Hossain, Kallyan Chakma, Afroza Akter Tanni, Md Ashikur Alim Akash, Mohammad Enayet Hossain, Mohammed Shah Nawaz Chowdhury, Md Habib Ullah Masum, Anwar Hossain, Shankar C Mandal, Keith A Crandall, Gholamali Rahnavard, S M Sharifuzzaman, Adnan Mannan
Genome sequence of white spot syndrome virus (WSSV) infecting cultured black tiger shrimp ( Penaeus monodon ) in Bangladesh. Microbiology resource announcements 13 (4) (2024)
S M Rafiqul Islam, Robel Ahmed, Farjana Sharmen, Md Mobarok Hossain, Kallyan Chakma, Afroza Akter Tanni, Md Ashikur Alim Akash, Mohammad Enayet Hossain, Mohammed Shah Nawaz Chowdhury, Md Habib Ullah Masum, Anwar Hossain, Shankar C Mandal, Keith A Crandall, Gholamali Rahnavard, S M Sharifuzzaman, Adnan Mannan
Genome sequence of white spot syndrome virus (WSSV) infecting cultured black tiger shrimp ( Penaeus monodon ) in Bangladesh. Microbiology resource announcements 13 (4) (2024)
Joanna M Wolfe, Lauren Ballou, Javier Luque, Victoria M Watson-Zink, Shane T Ahyong, Joëlle Barido-Sottani, Tin-Yam Chan, Ka Hou Chu, Keith A Crandall, Savel Regan Daniels, Darryl L Felder, Harrison Mancke, Joel W Martin, Peter K L Ng, Javier Ortega-Hernández, Emma Palacios Theil, N Dean Pentcheff, Rafael Robles, Brent P Thoma, Ling Ming Tsang, Regina Wetzer, Amanda M Windsor, Heather D Bracken-Grissom
Convergent adaptation of true crabs (Decapoda: Brachyura) to a gradient of terrestrial environments. Systematic biology (2023)
Andrea L Hahn, Aszia Burrell, Hollis Chaney, Iman Sami, Anastassios C Koumbourlis, Robert J Freishtat, Keith A Crandall, Edith T Zemanick
Therapeutic beta-lactam dosages and broad-spectrum antibiotics are associated with reductions in microbial richness and diversity in persons with cystic fibrosis. Scientific reports 13 (1) (2023)
Tomas Kanholm, Uzma Rentia, Melissa Hadley, Jennifer A Karlow, Olivia L Cox, Noor Diab, Matthew L Bendall, Tyson Dawson, James I McDonald, Wenbing Xie, Keith A Crandall, Kathleen H Burns, Stephen B Baylin, Hariharan Easwaran, Katherine B Chiappinelli
Oncogenic Transformation Drives DNA Methylation Loss and Transcriptional Activation of Transposable Element Loci. Cancer research (2023)
James P Bernot, Christopher L Owen, Joanna M Wolfe, Kenneth Meland, Jørgen Olesen, Keith A Crandall
Major revisions in pancrustacean phylogeny and evidence of sensitivity to taxon sampling. Molecular biology and evolution (2023)
Allison C Sylvetsky, Rebecca A Clement, Nathaniel Stearrett, Najy T Issa, Fiona J Dore, Raja Mazumder, Charles Hadley King, Monica J Hubal, Peter J Walter, Hongyi Cai, Sabyasachi Sen, Kristina I Rother, Keith A Crandall
Consumption of sucralose- and acesulfame-potassium-containing diet soda alters the relative abundance of microbial taxa at the species level: findings of two pilot studies. Applied physiology, nutrition, and metabolism = Physiologie appliquee, nutrition et metabolisme (2023)
Andrea L Hahn, Aszia Burrell, Hollis Chaney, Iman Sami, Anastassios C Koumbourlis, Robert J Freishtat, Keith A Crandall, Edith T Zemanick
Therapeutic beta-lactam dosages and broad-spectrum antibiotics are associated with reductions in microbial richness and diversity in persons with cystic fibrosis. Scientific reports 13 (1) (2023)
Andrea L Hahn, Aszia Burrell, Hollis Chaney, Iman Sami, Anastassios C Koumbourlis, Robert J Freishtat, Keith A Crandall, Edith T Zemanick
Therapeutic beta-lactam dosages and broad-spectrum antibiotics are associated with reductions in microbial richness and diversity in persons with cystic fibrosis. Scientific reports 13 (1) (2023)
Andrea L Hahn, Aszia Burrell, Hollis Chaney, Iman Sami, Anastassios C Koumbourlis, Robert J Freishtat, Keith A Crandall, Edith T Zemanick
Therapeutic beta-lactam dosages and broad-spectrum antibiotics are associated with reductions in microbial richness and diversity in persons with cystic fibrosis. Scientific reports 13 (1) (2023)
Mark L Blaxter, John M Archibald, Anna K Childers, Jonathan A Coddington, Keith A Crandall, Federica Di Palma, Richard Durbin, Scott V Edwards, Jennifer Ann Marshall Graves, Kevin J Hackett, Neil Hall, Erich D Jarvis, Rebecca N Johnson, Elinor K Karlsson, W John Kress, Shigehiro Kuraku, Mara K N Lawniczak, Kerstin Lindblad-Toh, Jose Victor Lopez, Nancy A Moran, Gene E Robinson, Oliver A Ryder, Beth Shapiro, Pamela S Soltis, Sebastien Roch, Guo-Jie Zhang, Harris A Lewin
Why sequence all eukaryotes? Proceedings of the National Academy of Sciences of the United States of America 119 (4) (2022)
Sergey Knyazev, Karishma Chhugani, Varuni Sarwal, Ram Ayyala, Harman Singh, Smruthi Karthikeyan, Dhrithi Deshpande, Pelin Icer Baykal, Zoia Comarova, Angela Lu, Yuri B Porozov, Tetyana I Vasylyeva, Joel O Wertheim, Braden T Tierney, Charles Y Chiu, Ren Sun, Aiping Wu, Malak S Abedalthagafi, Victoria M Pak, Shivashankar H Nagaraj, Adam L Smith, Pavel Skums, Bogdan Pasaniuc, Andrey Komissarov, Christopher E Mason, Eric Bortz, Philippe Lemey, Fyodor Kondrashov, Niko Beerenwinkel, Tommy Tsan-Yuk Lam, Nicholas C Wu, Alex Zelikovsky, Rob Knight, Keith A Crandall, Serghei Mangul
Unlocking capacities of genomics for the COVID-19 response and future pandemics. Nature methods 19 (4) (2022)
Jessica-Miranda Bustamante, Tyson Dawson, Caitlin Loeffler, Zara Marfori, Julian R Marchesi, Benjamin Harvey Mullish, Christopher C Thompson, Keith A Crandall, Ali Rahnavard, Jessica R Allegretti, Bethany P Cummings
Impact of Fecal Microbiota Transplantation on Gut Bacterial Bile Acid Metabolism in Humans. Nutrients 14 (24) (2022)
Seble G Kassaye, Zehava Grossman, Priyanka Vengurlekar, William Chai, Megan Wallace, Soo-Yon Rhee, William A Meyer, Harvey W Kaufman, Amanda Castel, Jeanne Jordan, Keith A Crandall, Alisa Kang, Princy Kumar, David A Katzenstein, Robert W Shafer, Frank Maldarelli
Insights into HIV-1 Transmission Dynamics Using Routinely Collected Data in the Mid-Atlantic United States. Viruses 15 (1) (2022)
Seble G Kassaye, Zehava Grossman, Priyanka Vengurlekar, William Chai, Megan Wallace, Soo-Yon Rhee, William A Meyer, Harvey W Kaufman, Amanda Castel, Jeanne Jordan, Keith A Crandall, Alisa Kang, Princy Kumar, David A Katzenstein, Robert W Shafer, Frank Maldarelli
Insights into HIV-1 Transmission Dynamics Using Routinely Collected Data in the Mid-Atlantic United States. Viruses 15 (1) (2022)
Gholamali Rahnavard, Brendan Mann, Abhigya Giri, Ranojoy Chatterjee, Keith A Crandall
Metabolite, protein, and tissue dysfunction associated with COVID-19 disease severity. Scientific reports 12 (1) (2022)
Jessica-Miranda Bustamante, Tyson Dawson, Caitlin Loeffler, Zara Marfori, Julian R Marchesi, Benjamin Harvey Mullish, Christopher C Thompson, Keith A Crandall, Ali Rahnavard, Jessica R Allegretti, Bethany P Cummings
Impact of Fecal Microbiota Transplantation on Gut Bacterial Bile Acid Metabolism in Humans. Nutrients 14 (24) (2022)
Seble G Kassaye, Zehava Grossman, Priyanka Vengurlekar, William Chai, Megan Wallace, Soo-Yon Rhee, William A Meyer, Harvey W Kaufman, Amanda Castel, Jeanne Jordan, Keith A Crandall, Alisa Kang, Princy Kumar, David A Katzenstein, Robert W Shafer, Frank Maldarelli
Insights into HIV-1 Transmission Dynamics Using Routinely Collected Data in the Mid-Atlantic United States. Viruses 15 (1) (2022)
Seble G Kassaye, Zehava Grossman, Priyanka Vengurlekar, William Chai, Megan Wallace, Soo-Yon Rhee, William A Meyer, Harvey W Kaufman, Amanda Castel, Jeanne Jordan, Keith A Crandall, Alisa Kang, Princy Kumar, David A Katzenstein, Robert W Shafer, Frank Maldarelli
Insights into HIV-1 Transmission Dynamics Using Routinely Collected Data in the Mid-Atlantic United States. Viruses 15 (1) (2022)
Mara K N Lawniczak, Richard Durbin, Paul Flicek, Kerstin Lindblad-Toh, Xiaofeng Wei, John M Archibald, William J Baker, Katherine Belov, Mark L Blaxter, Tomas Marques-Bonet, Anna K Childers, Jonathan A Coddington, Keith A Crandall, Andrew J Crawford, Robert P Davey, Federica Di Palma, Qi Fang, Wilfried Haerty, Neil Hall, Katharina J Hoff, Kerstin Howe, Erich D Jarvis, Warren E Johnson, Rebecca N Johnson, Paul Julian Kersey, Xin Liu, Jose Victor Lopez, Eugene W Myers, Olga Vinnere Pettersson, Adam M Phillippy, Monica F Poelchau, Kim D Pruitt, Arang Rhie, Juan Carlos Castilla-Rubio, Sunil Kumar Sahu, Nicholas A Salmon, Pamela S Soltis, David Swarbreck, Françoise Thibaud-Nissen, Sibo Wang, Jill L Wegrzyn, Guo-Jie Zhang, He Zhang, Harris A Lewin, Stephen Richards
Standards recommendations for the Earth BioGenome Project. Proceedings of the National Academy of Sciences of the United States of America 119 (4) (2022)
Manuel Aira, Marcos Pérez-Losada, Keith A Crandall, Jorge Domínguez
Composition, Structure and Diversity of Soil Bacterial Communities before, during and after Transit through the Gut of the Earthworm Aporrectodea caliginosa . Microorganisms 10 (5) (2022)
James P Bernot, Pavel Avdeyev, Anton Zamyatin, Niklas Dreyer, Nikita Alexeev, Marcos Pérez-Losada, Keith A Crandall
Chromosome-level genome assembly, annotation, and phylogenomics of the gooseneck barnacle Pollicipes pollicipes. GigaScience 11 (2022)
Seble G Kassaye, Zehava Grossman, Priyanka Vengurlekar, William Chai, Megan Wallace, Soo-Yon Rhee, William A Meyer, Harvey W Kaufman, Amanda Castel, Jeanne Jordan, Keith A Crandall, Alisa Kang, Princy Kumar, David A Katzenstein, Robert W Shafer, Frank Maldarelli
Insights into HIV-1 Transmission Dynamics Using Routinely Collected Data in the Mid-Atlantic United States. Viruses 15 (1) (2022)
Jessica-Miranda Bustamante, Tyson Dawson, Caitlin Loeffler, Zara Marfori, Julian R Marchesi, Benjamin Harvey Mullish, Christopher C Thompson, Keith A Crandall, Ali Rahnavard, Jessica R Allegretti, Bethany P Cummings
Impact of Fecal Microbiota Transplantation on Gut Bacterial Bile Acid Metabolism in Humans. Nutrients 14 (24) (2022)
Harris A Lewin, Stephen Richards, Erez Lieberman Aiden, Miguel L Allende, John M Archibald, Miklós Bálint, Katharine B Barker, Bridget Baumgartner, Katherine Belov, Giorgio Bertorelle, Mark L Blaxter, Jing Cai, Nicolette D Caperello, Keith Carlson, Juan Carlos Castilla-Rubio, Shu-Miaw Chaw, Lei Chen, Anna K Childers, Jonathan A Coddington, Dalia A Conde, Montserrat Corominas, Keith A Crandall, Andrew J Crawford, Federica DiPalma, Richard Durbin, ThankGod E Ebenezer, Scott V Edwards, Olivier Fedrigo, Paul Flicek, Giulio Formenti, Richard A Gibbs, Marcus Thomas Pius Gilbert, Melissa M Goldstein, Jennifer Ann Marshall Graves, Henry T Greely, Igor V Grigoriev, Kevin J Hackett, Neil Hall, David Haussler, Kristofer M Helgen, Carolyn J Hogg, Sachiko Isobe, Kjetill Sigurd Jakobsen, Axel Janke, Erich D Jarvis, Warren E Johnson, Steven J M Jones, Elinor K Karlsson, Paul J Kersey, Jin-Hyoung Kim, W John Kress, Shigehiro Kuraku, Mara K N Lawniczak, James H Leebens-Mack, Xueyan Li, Kerstin Lindblad-Toh, Xin Liu, Jose V Lopez, Tomas Marques-Bonet, Sophie Mazard, Jonna A K Mazet, Camila J Mazzoni, Eugene W Myers, Rachel J O'Neill, Sadye Paez, Hyun Park, Gene E Robinson, Cristina Roquet, Oliver A Ryder, Jamal S M Sabir, H Bradley Shaffer, Timothy M Shank, Jacob S Sherkow, Pamela S Soltis, Boping Tang, Leho Tedersoo, Marcela Uliano-Silva, Kun Wang, Xiaofeng Wei, Regina Wetzer, Julia L Wilson, Xun Xu, Huanming Yang, Anne D Yoder, Guo-Jie Zhang
The Earth BioGenome Project 2020: Starting the clock. Proceedings of the National Academy of Sciences of the United States of America 119 (4) (2022)
Jessica-Miranda Bustamante, Tyson Dawson, Caitlin Loeffler, Zara Marfori, Julian R Marchesi, Benjamin Harvey Mullish, Christopher C Thompson, Keith A Crandall, Ali Rahnavard, Jessica R Allegretti, Bethany P Cummings
Impact of Fecal Microbiota Transplantation on Gut Bacterial Bile Acid Metabolism in Humans. Nutrients 14 (24) (2022)
Jessica-Miranda Bustamante, Tyson Dawson, Caitlin Loeffler, Zara Marfori, Julian R Marchesi, Benjamin Harvey Mullish, Christopher C Thompson, Keith A Crandall, Ali Rahnavard, Jessica R Allegretti, Bethany P Cummings
Impact of Fecal Microbiota Transplantation on Gut Bacterial Bile Acid Metabolism in Humans. Nutrients 14 (24) (2022)
David Posada, Keith A Crandall
Felsenstein Phylogenetic Likelihood. Journal of molecular evolution 89 (3) (2021)
Andrea L Hahn, Aszia Burrell, Hollis Chaney, Iman Sami, Anastassios C Koumbourlis, Robert J Freishtat, Edith T Zemanick, Stan Louie, Keith A Crandall
Importance of beta-lactam pharmacokinetics and pharmacodynamics on the recovery of microbial diversity in the airway of persons with cystic fibrosis. Journal of investigative medicine : the official publication of the American Federation for Clinical Research 69 (7) (2021)
Margaret C Steiner, Jez L Marston, Luis P Iñiguez, Matthew L Bendall, Katherine B Chiappinelli, Douglas F Nixon, Keith A Crandall
Locus-Specific Characterization of Human Endogenous Retrovirus Expression in Prostate, Breast, and Colon Cancers. Cancer research 81 (13) (2021)
Carla N Mavian, Sergei Kosakovsky Pond, Simone Marini, Brittany Rife Magalis, Anne-Mieke Vandamme, Simon Dellicour, Samuel V Scarpino, Charlotte J Houldcroft, Julian Villabona-Arenas, Taylor K Paisie, Nídia Sequeira Trovão, Christina Boucher, Yun Zhang, Richard H Scheuermann, Olivier Gascuel, Tommy Tsan-Yuk Lam, Marc A Suchard, Ana Abecasis, Eduan Wilkinson, Tulio de Oliveira, Ana I Bento, Heiko A Schmidt, Darren Martin, James Hadfield, Nuno Faria, Nathan D Grubaugh, Richard A Neher, Guy Baele, Philippe Lemey, Tanja Stadler, Jan Albert, Keith A Crandall, Thomas Leitner, Alexandros Stamatakis, Mattia A Prosperi, Marco Salemi
Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable. Proceedings of the National Academy of Sciences of the United States of America 117 (23) (2020)
Keylie M Gibson, Kamwing Jair, Amanda D Castel, Matthew L Bendall, Brittany Wilbourn, Jeanne A Jordan, Keith A Crandall, Marcos Pérez-Losada, null null
Author Correction: A cross-sectional study to characterize local HIV-1 dynamics in Washington, DC using next-generation sequencing. Scientific reports 10 (1) (2020)
Keylie M Gibson, Margaret C Steiner, Uzma Rentia, Matthew L Bendall, Marcos Pérez-Losada, Keith A Crandall
Validation of Variant Assembly Using HAPHPIPE with Next-Generation Sequence Data from Viruses. Viruses 12 (7) (2020)
Keylie M Gibson, Kamwing Jair, Amanda D Castel, Matthew L Bendall, Brittany Wilbourn, Jeanne A Jordan, Keith A Crandall, Marcos Pérez-Losada, null null
A cross-sectional study to characterize local HIV-1 dynamics in Washington, DC using next-generation sequencing. Scientific reports 10 (1) (2020)
Allison R Kolbe, Matthew L Bendall, Alexander T Pearson, Doru Paul, Douglas F Nixon, Marcos Pérez-Losada, Keith A Crandall
Human Endogenous Retrovirus Expression Is Associated with Head and Neck Cancer and Differential Survival. Viruses 12 (9) (2020)
Lily C Hughes, Guillermo Ortí, Hadeel Saad, Chen-Hong Li, William T White, Carole C Baldwin, Keith A Crandall, Dahiana Arcila, Ricardo Betancur-R
Exon probe sets and bioinformatics pipelines for all levels of fish phylogenomics. Molecular ecology resources 21 (3) (2020)
Matthieu J Miossec, Sandro L Valenzuela, Marcos Pérez-Losada, W Evan Johnson, Keith A Crandall, Eduardo Castro-Nallar
Evaluation of computational methods for human microbiome analysis using simulated data. PeerJ 8 (2020)
Margaret C Steiner, Keylie M Gibson, Keith A Crandall
Drug Resistance Prediction Using Deep Learning Techniques on HIV-1 Sequence Data. Viruses 12 (5) (2020)
Christopher L Owen, David Ben Stern, Sarah K Hilton, Keith A Crandall
Hemiptera phylogenomic resources: Tree-based orthology prediction and conserved exon identification. Molecular ecology resources 20 (5) (2020)
Victoria K Shanmugam, D Jones, S McNish, Matthew L Bendall, Keith A Crandall
Transcriptome patterns in hidradenitis suppurativa: support for the role of antimicrobial peptides and interferon pathways in disease pathogenesis. Clinical and experimental dermatology 44 (8) (2019)
Andrea L Hahn, Hani Fanous, Caroline Jensen, Hollis Chaney, Iman Sami, Geovanny F Perez, Anastassios C Koumbourlis, Stan Louie, James E Bost, John N van den Anker, Robert J Freishtat, Edith T Zemanick, Keith A Crandall
Changes in microbiome diversity following beta-lactam antibiotic treatment are associated with therapeutic versus subtherapeutic antibiotic exposure in cystic fibrosis. Scientific reports 9 (1) (2019)
Keylie M Gibson, Bryan N Nguyen, Laura M Neumann, Michele Miller, Peter Buss, Savel Daniels, Michelle J Ahn, Keith A Crandall, Budhan Pukazhenthi
Gut microbiome differences between wild and captive black rhinoceros - implications for rhino health. Scientific reports 9 (1) (2019)
Charles H King, Hiral Desai, Allison C Sylvetsky, Jonathan LoTempio, Shant Ayanyan, Jill Carrie, Keith A Crandall, Brian C Fochtman, Lusine Gasparyan, Naila Gulzar, Paul Howell, Najy Issa, Konstantinos Krampis, Lopa Mishra, Hiroki Morizono, Joseph R Pisegna, Shuyun Rao, Yao Ren, Vahan Simonyan, Krista Smith, Sharanjit VedBrat, Michael D Yao, Raja Mazumder
Baseline human gut microbiota profile in healthy people and standard reporting template. PloS one 14 (9) (2019)
Christine Ewers, Christopher L Owen, Marcos Pérez-Losada, Jens T Høeg, Henrik Glenner, Benny K K Chan, Keith A Crandall
Towards a barnacle tree of life: integrating diverse phylogenetic efforts into a comprehensive hypothesis of thecostracan evolution. PeerJ 7 (2019)
Matthew L Bendall, Miguel de Mulder, Luis Pedro Iñiguez, Aarón Lecanda-Sánchez, Marcos Pérez-Losada, Mario A Ostrowski, R Brad Jones, Lubbertus C F Mulder, Gustavo Reyes-Terán, Keith A Crandall, Christopher E Ormsby, Douglas F Nixon
Telescope: Characterization of the retrotranscriptome by accurate estimation of transposable element expression. PLoS computational biology 15 (9) (2019)
Mohammad Nazmul Hoque, Arif Istiaq, Rebecca A Clement, Munawar Sultana, Keith A Crandall, Amam Zonaed Siddiki, M Anwar Hossain
Metagenomic deep sequencing reveals association of microbiome signature with functional biases in bovine mastitis. Scientific reports 9 (1) (2019)
Luis Pedro Iñiguez, Miguel de Mulder Rougvie, Nathaniel Stearrett, Richard B Jones, Christopher E Ormsby, Gustavo Reyes-Terán, Keith A Crandall, Douglas F Nixon, Matthew L Bendall
Transcriptomic analysis of human endogenous retroviruses in systemic lupus erythematosus. Proceedings of the National Academy of Sciences of the United States of America 116 (43) (2019)
Brian J Kegerreis, Michelle D Catalina, Prathyusha S Bachali, Nicholas S Geraci, Adam C Labonte, Chen Zeng, Nathaniel Stearrett, Keith A Crandall, Peter E Lipsky, Amrie C Grammer
Machine learning approaches to predict lupus disease activity from gene expression data. Scientific reports 9 (1) (2019)
Harris A Lewin, Gene E Robinson, W John Kress, William J Baker, Jonathan Coddington, Keith A Crandall, Richard Durbin, Scott V Edwards, Félix Forest, M Thomas P Gilbert, Melissa M Goldstein, Igor V Grigoriev, Kevin J Hackett, David Haussler, Erich D Jarvis, Warren E Johnson, Aristides Patrinos, Stephen Richards, Juan Carlos Castilla-Rubio, Marie-Anne van Sluys, Pamela S Soltis, Xun Xu, Huanming Yang, Guojie Zhang
Earth BioGenome Project: Sequencing life for the future of life. Proceedings of the National Academy of Sciences of the United States of America 115 (17) (2018)
Liam Spurr, Muzi Li, Nawaf Alomran, Qianqian Zhang, Paula Restrepo, Mercedeh Movassagh, Chris Trenkov, Nerissa Tunnessen, Tatiyana Apanasovich, Keith A Crandall, Nathan Edwards, Anelia Dafinova Horvath
Systematic pan-cancer analysis of somatic allele frequency. Scientific reports 8 (1) (2018)
David Ben Stern, Jesse Breinholt, Carlos Pedraza-Lara, Marilú López-Mejía, Christopher L Owen, Heather Bracken-Grissom, James W Fetzner, Keith A Crandall
Phylogenetic evidence from freshwater crayfishes that cave adaptation is not an evolutionary dead-end. Evolution; international journal of organic evolution 71 (10) (2017)
Paula Restrepo, Mercedeh Movassagh, Nawaf Alomran, Christian Miller, Muzi Li, Chris Trenkov, Yulian Manchev, Sonali Bahl, Stephanie Warnken, Liam Spurr, Tatiyana Apanasovich, Keith A Crandall, Nathan Edwards, Anelia Dafinova Horvath
Overexpressed somatic alleles are enriched in functional elements in Breast Cancer. Scientific reports 7 (1) (2017)
Cody E Hinchliff, Stephen A Smith, James F Allman, J Gordon Burleigh, Ruchi Chaudhary, Lyndon M Coghill, Keith A Crandall, Jiabin Deng, Bryan T Drew, Romina Gazis, Karl Gude, David S Hibbett, Laura A Katz, H Dail Laughinghouse, Emily Jane McTavish, Peter E Midford, Christopher L Owen, Richard H Ree, Jonathan A Rees, Douglas E Soltis, Tiffani Williams, Karen A Cranston
Synthesis of phylogeny and taxonomy into a comprehensive tree of life. Proceedings of the National Academy of Sciences of the United States of America 112 (41) (2015)

Keith A Crandall.css-eqlu8i{font-size:small;padding-left:4px;} (Keith Crandall, K A Crandall)

Publication Activity (10 Years)

Top Topics

Top Venues

Keith A Crandall (Keith Crandall, K A Crandall)