Scott V Edwards

Loop profile Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 47

Top Topics

Gene Expression

Top Venues

Proceedings of the National Academy of Sciences of the United States of America

Molecular biology and evolution

Science (New York, N.Y.)

Molecular ecology resources

This page only lists publications with an associated author ORCID identifier.

Publications

Emily J Stringer, Bernd Gruber, Stephen D Sarre, Glenda M Wardle, Scott V Edwards, Christopher R Dickman, Aaron C Greenville, Richard P Duncan
Boom-bust population dynamics drive rapid genetic change. Proceedings of the National Academy of Sciences of the United States of America 121 (18) (2024)
Shaoyuan Wu, Frank E Rheindt, Jin Zhang, Jiajia Wang, Lei Zhang, Cheng Quan, Zhiheng Li, Wang Min, Feixiang Wu, Yanhua Qu, Scott V Edwards, Zhonghe Zhou, Liang Liu
Reply to Claramunt et al.: Robustness of the Cretaceous radiation of crown aves. Proceedings of the National Academy of Sciences of the United States of America 121 (39) (2024)
Emily J Stringer, Bernd Gruber, Stephen D Sarre, Glenda M Wardle, Scott V Edwards, Christopher R Dickman, Aaron C Greenville, Richard P Duncan
Boom-bust population dynamics drive rapid genetic change. Proceedings of the National Academy of Sciences of the United States of America 121 (18) (2024)
Simon Yung Wa Sin, Fushi Ke, Guoling Chen, Pei-Yu Huang, Erik D Enbody, Jordan Karubian, Michael S Webster, Scott V Edwards
Genetic Basis and Evolution of Structural Color Polymorphism in an Australian Songbird. Molecular biology and evolution 41 (3) (2024)
Gregg W C Thomas, Patrick Gemmell, Subir B Shakya, Zhirui Hu, Jun S Liu, Timothy B Sackton, Scott V Edwards
Practical guidance and workflows for identifying fast evolving non-coding genomic elements using PhyloAcc. Integrative and comparative biology (2024)
Scott V Edwards, Alison Cloutier, Glenn Cockburn, Robert J Driver, Phil Grayson, Kazutaka Katoh, Maude W Baldwin, Timothy B Sackton, Allan J Baker
A nuclear genome assembly of an extinct flightless bird, the little bush moa. Science advances 10 (21) (2024)
Shaoyuan Wu, Frank E Rheindt, Jin Zhang, Jiajia Wang, Lei Zhang, Cheng Quan, Zhiheng Li, Wang Min, Feixiang Wu, Yanhua Qu, Scott V Edwards, Zhonghe Zhou, Liang Liu
Genomes, fossils, and the concurrent rise of modern birds and flowering plants in the Late Cretaceous. Proceedings of the National Academy of Sciences of the United States of America 121 (8) (2024)
Shaoyuan Wu, Frank E Rheindt, Jin Zhang, Jiajia Wang, Lei Zhang, Cheng Quan, Zhiheng Li, Wang Min, Feixiang Wu, Yanhua Qu, Scott V Edwards, Zhonghe Zhou, Liang Liu
Genomes, fossils, and the concurrent rise of modern birds and flowering plants in the Late Cretaceous. Proceedings of the National Academy of Sciences of the United States of America 121 (8) (2024)
Simon Yung Wa Sin, Fushi Ke, Guoling Chen, Pei-Yu Huang, Erik D Enbody, Jordan Karubian, Michael S Webster, Scott V Edwards
Genetic basis and evolution of structural color polymorphism in an Australian songbird. Molecular biology and evolution (2024)
Shaoyuan Wu, Frank E Rheindt, Jin Zhang, Jiajia Wang, Lei Zhang, Cheng Quan, Zhiheng Li, Wang Min, Feixiang Wu, Yanhua Qu, Scott V Edwards, Zhonghe Zhou, Liang Liu
Genomes, fossils, and the concurrent rise of modern birds and flowering plants in the Late Cretaceous. Proceedings of the National Academy of Sciences of the United States of America 121 (8) (2024)
Simon Yung Wa Sin, Fushi Ke, Guoling Chen, Pei-Yu Huang, Erik D Enbody, Jordan Karubian, Michael S Webster, Scott V Edwards
Genetic basis and evolution of structural color polymorphism in an Australian songbird. Molecular biology and evolution (2024)
Shaoyuan Wu, Frank E Rheindt, Jin Zhang, Jiajia Wang, Lei Zhang, Cheng Quan, Zhiheng Li, Wang Min, Feixiang Wu, Yanhua Qu, Scott V Edwards, Zhonghe Zhou, Liang Liu
Reply to Springer and Gatesy: The impact of long branches and misalignments on phylogenetic analysis is minimal. Proceedings of the National Academy of Sciences of the United States of America 121 (29) (2024)
Simon Yung Wa Sin, Fushi Ke, Guoling Chen, Pei-Yu Huang, Erik D Enbody, Jordan Karubian, Michael S Webster, Scott V Edwards
Genetic Basis and Evolution of Structural Color Polymorphism in an Australian Songbird. Molecular biology and evolution 41 (3) (2024)
Emily J Stringer, Bernd Gruber, Stephen D Sarre, Glenda M Wardle, Scott V Edwards, Christopher R Dickman, Aaron C Greenville, Richard P Duncan
Boom-bust population dynamics drive rapid genetic change. Proceedings of the National Academy of Sciences of the United States of America 121 (18) (2024)
Emily J Stringer, Bernd Gruber, Stephen D Sarre, Glenda M Wardle, Scott V Edwards, Christopher R Dickman, Aaron C Greenville, Richard P Duncan
Boom-bust population dynamics drive rapid genetic change. Proceedings of the National Academy of Sciences of the United States of America 121 (18) (2024)
Shaoyuan Wu, Frank E Rheindt, Jin Zhang, Jiajia Wang, Lei Zhang, Cheng Quan, Zhiheng Li, Wang Min, Feixiang Wu, Yanhua Qu, Scott V Edwards, Zhonghe Zhou, Liang Liu
Reply to Springer and Gatesy: The impact of long branches and misalignments on phylogenetic analysis is minimal. Proceedings of the National Academy of Sciences of the United States of America 121 (29) (2024)
Shaoyuan Wu, Frank E Rheindt, Jin Zhang, Jiajia Wang, Lei Zhang, Cheng Quan, Zhiheng Li, Wang Min, Feixiang Wu, Yanhua Qu, Scott V Edwards, Zhonghe Zhou, Liang Liu
Genomes, fossils, and the concurrent rise of modern birds and flowering plants in the Late Cretaceous. Proceedings of the National Academy of Sciences of the United States of America 121 (8) (2024)
Han Yan, Zhirui Hui, Gregg W C Thomas, Scott V Edwards, Timothy B Sackton, Jun S Liu
PhyloAcc-GT: A Bayesian method for inferring patterns of substitution rate shifts on targeted lineages accounting for gene tree discordance. Molecular biology and evolution (2023)
Russell Dinnage, Stephen D Sarre, Richard P Duncan, Christopher R Dickman, Scott V Edwards, Aaron C Greenville, Glenda M Wardle, Bernd Gruber
slimr: An R package for tailor-made integrations of data in population genomic simulations over space and time. Molecular ecology resources 24 (3) (2023)
Russell Dinnage, Stephen D Sarre, Richard P Duncan, Christopher R Dickman, Scott V Edwards, Aaron C Greenville, Glenda M Wardle, Bernd Gruber
slimr: An R package for tailor-made integrations of data in population genomic simulations over space and time. Molecular ecology resources (2023)
Keren R Sadanandan, Meng-Ching Ko, Gabriel W Low, Manfred Gahr, Scott V Edwards, Michael Hiller, Timothy B Sackton, Frank E Rheindt, Simon Yung Wa Sin, Maude W Baldwin
Convergence in hearing-related genes between echolocating birds and mammals. Proceedings of the National Academy of Sciences of the United States of America 120 (43) (2023)
Sarah Khalil, Erik D Enbody, Carolina Frankl-Vilches, Joseph F Welklin, Rebecca E Koch, Matthew B Toomey, Simon Yung Wa Sin, Scott V Edwards, Manfred Gahr, Hubert Schwabl, Michael S Webster, Jordan Karubian
Testosterone coordinates gene expression across different tissues to produce carotenoid-based red ornamentation. Molecular biology and evolution (2023)
Russell Dinnage, Stephen D Sarre, Richard P Duncan, Christopher R Dickman, Scott V Edwards, Aaron C Greenville, Glenda M Wardle, Bernd Gruber
slimr: An R package for tailor-made integrations of data in population genomic simulations over space and time. Molecular ecology resources 24 (3) (2023)
Stella Huynh, Alison Cloutier, Guoling Chen, David Tsz Chung Chan, Derek Kong Lam, Kathryn P Huyvaert, Fumio Sato, Scott V Edwards, Simon Yung Wa Sin
Whole-genome analyses reveal past population fluctuations and low genetic diversities of the North Pacific albatrosses. Molecular biology and evolution (2023)
Héctor Lorente-Martínez, Ainhoa Agorreta, Iker Irisarri, Rafael Zardoya, Scott V Edwards, Diego San Mauro
Multiple Instances of Adaptive Evolution in Aquaporins of Amphibious Fishes. Biology 12 (6) (2023)
Héctor Lorente-Martínez, Ainhoa Agorreta, Iker Irisarri, Rafael Zardoya, Scott V Edwards, Diego San Mauro
Multiple Instances of Adaptive Evolution in Aquaporins of Amphibious Fishes. Biology 12 (6) (2023)
Daren C Card, W Bryan Jennings, Scott V Edwards
Genome Evolution and the Future of Phylogenomics of Non-Avian Reptiles. Animals : an open access journal from MDPI 13 (3) (2023)
Daren C Card, W Bryan Jennings, Scott V Edwards
Genome Evolution and the Future of Phylogenomics of Non-Avian Reptiles. Animals : an open access journal from MDPI 13 (3) (2023)
Peta L Hill, Chris R Dickman, Russell Dinnage, Richard P Duncan, Scott V Edwards, Aaron Greenville, Stephen D Sarre, Emily J Stringer, Glenda M Wardle, Bernd Gruber
Episodic population fragmentation and gene flow reveal a trade-off between heterozygosity and allelic richness. Molecular ecology (2023)
Mark L Blaxter, John M Archibald, Anna K Childers, Jonathan A Coddington, Keith A Crandall, Federica Di Palma, Richard Durbin, Scott V Edwards, Jennifer Ann Marshall Graves, Kevin J Hackett, Neil Hall, Erich D Jarvis, Rebecca N Johnson, Elinor K Karlsson, W John Kress, Shigehiro Kuraku, Mara K N Lawniczak, Kerstin Lindblad-Toh, Jose Victor Lopez, Nancy A Moran, Gene E Robinson, Oliver A Ryder, Beth Shapiro, Pamela S Soltis, Sebastien Roch, Guo-Jie Zhang, Harris A Lewin
Why sequence all eukaryotes? Proceedings of the National Academy of Sciences of the United States of America 119 (4) (2022)
John T Burley, Sophia C M Orzechowski, Simon Yung Wa Sin, Scott V Edwards
Whole-genome phylogeography of the blue-faced honeyeater (Entomyzon cyanotis) and discovery and characterization of a neo-Z chromosome. Molecular ecology (2022)
Harris A Lewin, Stephen Richards, Erez Lieberman Aiden, Miguel L Allende, John M Archibald, Miklós Bálint, Katharine B Barker, Bridget Baumgartner, Katherine Belov, Giorgio Bertorelle, Mark L Blaxter, Jing Cai, Nicolette D Caperello, Keith Carlson, Juan Carlos Castilla-Rubio, Shu-Miaw Chaw, Lei Chen, Anna K Childers, Jonathan A Coddington, Dalia A Conde, Montserrat Corominas, Keith A Crandall, Andrew J Crawford, Federica DiPalma, Richard Durbin, ThankGod E Ebenezer, Scott V Edwards, Olivier Fedrigo, Paul Flicek, Giulio Formenti, Richard A Gibbs, Marcus Thomas Pius Gilbert, Melissa M Goldstein, Jennifer Ann Marshall Graves, Henry T Greely, Igor V Grigoriev, Kevin J Hackett, Neil Hall, David Haussler, Kristofer M Helgen, Carolyn J Hogg, Sachiko Isobe, Kjetill Sigurd Jakobsen, Axel Janke, Erich D Jarvis, Warren E Johnson, Steven J M Jones, Elinor K Karlsson, Paul J Kersey, Jin-Hyoung Kim, W John Kress, Shigehiro Kuraku, Mara K N Lawniczak, James H Leebens-Mack, Xueyan Li, Kerstin Lindblad-Toh, Xin Liu, Jose V Lopez, Tomas Marques-Bonet, Sophie Mazard, Jonna A K Mazet, Camila J Mazzoni, Eugene W Myers, Rachel J O'Neill, Sadye Paez, Hyun Park, Gene E Robinson, Cristina Roquet, Oliver A Ryder, Jamal S M Sabir, H Bradley Shaffer, Timothy M Shank, Jacob S Sherkow, Pamela S Soltis, Boping Tang, Leho Tedersoo, Marcela Uliano-Silva, Kun Wang, Xiaofeng Wei, Regina Wetzer, Julia L Wilson, Xun Xu, Huanming Yang, Anne D Yoder, Guo-Jie Zhang
The Earth BioGenome Project 2020: Starting the clock. Proceedings of the National Academy of Sciences of the United States of America 119 (4) (2022)
Flavia Termignoni-Garcia, Jeremy J Kirchman, Johnathan Clark, Scott V Edwards
Comparative Population Genomics of Cryptic Speciation and Adaptive Divergence in Bicknell's and Gray-Cheeked Thrushes (Aves: Catharus bicknelli and Catharus minimus). Genome biology and evolution 14 (1) (2022)
Yasuka Toda, Meng-Ching Ko, Qiaoyi Liang, Eliot T Miller, Alejandro Rico-Guevara, Tomoya Nakagita, Ayano Sakakibara, Kana Uemura, Timothy B Sackton, Takashi Hayakawa, Simon Yung Wa Sin, Yoshiro Ishimaru, Takumi Misaka, Pablo Oteiza, James D Crall, Scott V Edwards, William A Buttemer, Shuichi Matsumura, Maude W Baldwin
Early origin of sweet perception in the songbird radiation. Science (New York, N.Y.) 373 (6551) (2021)
Michael G Harvey, Gustavo A Bravo, Santiago Claramunt, Andrés M Cuervo, Graham Earnest Derryberry, Jaqueline Battilana, Glenn Fairbanks Seeholzer, Jessica Shearer McKay, Brian C O'Meara, Brant C Faircloth, Scott V Edwards, Jorge Pérez-Emán, Robert G Moyle, Frederick H Sheldon, Alexandre Aleixo, Brian Tilston Smith, R Terry Chesser, Luís Fábio Silveira, Joel Cracraft, Robb Thomas Brumfield, Elizabeth Perrault Derryberry
The evolution of a tropical biodiversity hotspot. Science (New York, N.Y.) 370 (6522) (2021)
Sangeet Lamichhaney, Renee Catullo, J Scott Keogh, Simon Clulow, Scott V Edwards, Tariq Ezaz
A bird-like genome from a frog: Mechanisms of genome size reduction in the ornate burrowing frog, Platyplectrum ornatum. Proceedings of the National Academy of Sciences of the United States of America 118 (11) (2021)
Eamon C Corbett, Gustavo A Bravo, Fabio Schunck, Luciano Nicolas Naka, Luís Fábio Silveira, Scott V Edwards
Evidence for the Pleistocene Arc Hypothesis from genome-wide SNPs in a Neotropical dry forest specialist, the Rufous-fronted Thornbird (Furnariidae: Phacellodomus rufifrons). Molecular ecology 29 (22) (2020)
Neil J Gemmell, Kim M Rutherford, Stefan Prost, Marc Tollis, David Winter, J Robert Macey, David L Adelson, Alexander Suh, Terry Bertozzi, José H Grau, Chris Organ, Paul P Gardner, Matthieu Muffato, Mateus Patricio, Konstantinos Billis, Fergal J Martin, Paul Flicek, Bent Petersen, Lin Kang, Pawel Michalak, Thomas R Buckley, Melissa Wilson, Yuanyuan Cheng, Hilary Miller, Ryan K Schott, Melissa D Jordan, Richard D Newcomb, José Ignacio Arroyo, Nicole Valenzuela, Tim A Hore, Jaime Renart, Valentina Peona, Claire R Peart, Vera M Warmuth, Lu Zeng, R Daniel Kortschak, Joy M Raison, Valeria Velásquez Zapata, Zhiqiang Wu, Didac Santesmasses, Marco Mariotti, Roderic Guigó, Shawn M Rupp, Victoria G Twort, Nicolas Dussex, Helen Taylor, Hideaki Abe, Donna M Bond, James M Paterson, Daniel G Mulcahy, Vanessa L Gonzalez, Charles G Barbieri, Dustin P DeMeo, Stephan Pabinger, Tracey Van Stijn, Shannon M Clarke, Oliver A Ryder, Scott V Edwards, Steven L Salzberg, Lindsay Anderson, Nicola Nelson, Clive Stone, null null
The tuatara genome reveals ancient features of amniote evolution. Nature 584 (7821) (2020)
Simon Yung Wa Sin, Lily Lu, Scott V Edwards
De Novo Assembly of the Northern Cardinal (Cardinalis cardinalis) Genome Reveals Candidate Regulatory Regions for Sexually Dichromatic Red Plumage Coloration. G3 (Bethesda, Md.) 10 (10) (2020)
Emily A O'Connor, Helena Westerdahl, Reto Burri, Scott V Edwards
Avian MHC Evolution in the Era of Genomics: Phase 1.0. Cells 8 (10) (2019)
Timothy B Sackton, Phil Grayson, Alison Cloutier, Zhirui Hu, Jun S Liu, Nicole E Wheeler, Paul P Gardner, Julia A Clarke, Allan J Baker, Michele Clamp, Scott V Edwards
Convergent regulatory evolution and loss of flight in paleognathous birds. Science (New York, N.Y.) 364 (6435) (2019)
Gustavo A Bravo, Alexandre Antonelli, Christine D Bacon, Krzysztof Bartoszek, Mozes P K Blom, Stella Huynh, Graham Jones, L Lacey Knowles Knowles, Sangeet Lamichhaney, Thomas Marcussen, Hélène Morlon, Luay K Nakhleh, Bengt Oxelman, Bernard Pfeil, Alexander Schliep, Niklas Wahlberg, Fernanda P Werneck, John Wiedenhöft, Sandi Willows-Munro, Scott V Edwards
Embracing heterogeneity: coalescing the Tree of Life and the future of phylogenomics. PeerJ 7 (2019)
C Jonathan Schmitt, Joseph A Cook, Kelly Raquel Zamudio, Scott V Edwards
Museum specimens of terrestrial vertebrates are sensitive indicators of environmental change in the Anthropocene. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 374 (1763) (2018)
Harris A Lewin, Gene E Robinson, W John Kress, William J Baker, Jonathan Coddington, Keith A Crandall, Richard Durbin, Scott V Edwards, Félix Forest, M Thomas P Gilbert, Melissa M Goldstein, Igor V Grigoriev, Kevin J Hackett, David Haussler, Erich D Jarvis, Warren E Johnson, Aristides Patrinos, Stephen Richards, Juan Carlos Castilla-Rubio, Marie-Anne van Sluys, Pamela S Soltis, Xun Xu, Huanming Yang, Guojie Zhang
Earth BioGenome Project: Sequencing life for the future of life. Proceedings of the National Academy of Sciences of the United States of America 115 (17) (2018)
Alexandre Antonelli, María Ariza, James Albert, Tobias Andermann, Josué Azevedo, Christine D Bacon, Søren Faurby, Thaís Barreto Guedes, Carina Hoorn, Lúcia G Lohmann, Pável Matos-Maraví, Camila Duarte Ritter, Isabel Sanmartín, Daniele Silvestro, Marcelo Tejedor, Hans Ter Steege, Hanna Tuomisto, Fernanda P Werneck, Alexander Zizka, Scott V Edwards
Conceptual and empirical advances in Neotropical biodiversity research. PeerJ 6 (2018)
Shane C Campbell-Staton, Zachary A Cheviron, Nicolas C Rochette, Julian M Catchen, Jonathan B Losos, Scott V Edwards
Winter storms drive rapid phenotypic, regulatory, and genomic shifts in the green anole lizard. Science (New York, N.Y.) 357 (6350) (2017)
Liang Liu, Jin Zhang, Frank E Rheindt, Fumin Lei, Yanhua Qu, Yu Wang, Yu Zhang, Corwin Sullivan, Wenhui Nie, Jinhuan Wang, Fengtang Yang, Jinping Chen, Scott V Edwards, Jin Meng, Shaoyuan Wu
Reply to Gatesy and Springer: Claims of homology errors and zombie lineages do not compromise the dating of placental diversification. Proceedings of the National Academy of Sciences of the United States of America 114 (45) (2017)