Soichi Wakatsuki

ORCID

Publication Activity (10 Years)

Years Active: 2019-2023
Publications (10 Years): 16

Top Venues

Nature communications

Proceedings of the National Academy of Sciences of the United States of America

Research square

ACS central science

Stanford University

Stanford University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Stanford University Jan 01 2013

United States

Professor :: Structural Biology, School of Medicine

Stanford Linear Accelerator Laboratory Jan 01 2013

United States

Professor :: Photon Science

High Energy Research Organization (KEK) - Dec 31 2012

Japan

Professor :: Structural Biology Research Center, Institute of Materials Structure Science

European Synchrotron Radiation Facility

France

Group Leader :: Experiments Division

University of Oxford

United Kingdom

Postdoctoral Fellow :: Laboratory of Molecular Biophysics

Education History

Stanford University

United States

PHD :: Chemistry

Publications

Brian C Sanders, Suman Pokhrel, Audrey D Labbe, Irimpan I Mathews, Connor J Cooper, Russell B Davidson, Gwyndalyn Phillips, Kevin L Weiss, Qiu Zhang, Hugh Michael O'Neill, Manat Kaur, Jurgen G Schmidt, Walter Reichard, Surekha Surendranathan, Jyothi Parvathareddy, Lexi Phillips, Christopher Rainville, David E Sterner, Desigan Kumaran, Babak Andi, Gyorgy Babnigg, Nigel W Moriarty, Paul D Adams, Andrzej Joachimiak, Brett L Hurst, Suresh Kumar, Tauseef R Butt, Colleen Beth Jonsson, Lori Ferrins, Soichi Wakatsuki, Stephanie Galanie, Martha S Head, Jerry M Parks
Potent and selective covalent inhibition of the papain-like protease from SARS-CoV-2. Nature communications 14 (1) (2023)
James S Davies, Michael J Currie, Rachel A North, Mariafrancesca Scalise, Joshua D Wright, Jack M Copping, Daniela M Remus, Ashutosh Gulati, Dustin R Morado, Sam A Jamieson, Michael C Newton-Vesty, Gayan S Abeysekera, Subramanian Ramaswamy, Rosmarie Friemann, Soichi Wakatsuki, Jane R Allison, Cesare Indiveri, David Drew, Peter D Mace, Renwick C J Dobson
Structure and mechanism of a tripartite ATP-independent periplasmic TRAP transporter. Nature communications 14 (1) (2023)
James S Davies, Michael J Currie, Rachel A North, Mariafrancesca Scalise, Joshua D Wright, Jack M Copping, Daniela M Remus, Ashutosh Gulati, Dustin R Morado, Sam A Jamieson, Michael C Newton-Vesty, Gayan S Abeysekera, Subramanian Ramaswamy, Rosmarie Friemann, Soichi Wakatsuki, Jane R Allison, Cesare Indiveri, David Drew, Peter D Mace, Renwick C J Dobson
Structure and mechanism of a tripartite ATP-independent periplasmic TRAP transporter. Nature communications 14 (1) (2023)
Brian C Sanders, Suman Pokhrel, Audrey D Labbe, Irimpan I Mathews, Connor J Cooper, Russell B Davidson, Gwyndalyn Phillips, Kevin L Weiss, Qiu Zhang, Hugh Michael O'Neill, Manat Kaur, Jurgen G Schmidt, Walter Reichard, Surekha Surendranathan, Jyothi Parvathareddy, Lexi Phillips, Christopher Rainville, David E Sterner, Desigan Kumaran, Babak Andi, Gyorgy Babnigg, Nigel W Moriarty, Paul D Adams, Andrzej Joachimiak, Brett L Hurst, Suresh Kumar, Tauseef R Butt, Colleen Beth Jonsson, Lori Ferrins, Soichi Wakatsuki, Stephanie Galanie, Martha S Head, Jerry M Parks
Potent and selective covalent inhibition of the papain-like protease from SARS-CoV-2. Nature communications 14 (1) (2023)
James S Davies, Michael J Currie, Rachel A North, Mariafrancesca Scalise, Joshua D Wright, Jack M Copping, Daniela M Remus, Ashutosh Gulati, Dustin R Morado, Sam A Jamieson, Michael C Newton-Vesty, Gayan S Abeysekera, Subramanian Ramaswamy, Rosmarie Friemann, Soichi Wakatsuki, Jane R Allison, Cesare Indiveri, David Drew, Peter D Mace, Renwick C J Dobson
Structure and mechanism of a tripartite ATP-independent periplasmic TRAP transporter. Nature communications 14 (1) (2023)
Nina-Eleni Christou, Virginia Apostolopoulou, Diogo V M Melo, Matthias Ruppert, Alisia Fadini, Alessandra Henkel, Janina Sprenger, Dominik Oberthür, Sebastian Günther, Anastasios Pateras, Aida Rahmani Mashhour, Oleksandr M Yefanov, Marina Galchenkova, Patrick Y A Reinke, Viviane Kremling, T Emilie S Scheer, Esther R Lange, Philipp Middendorf, Robin Schubert, Elke De Zitter, Koya Lumbao-Conradson, Jonathan Herrmann, Simin Rahighi, Ajda Kunavar, Emma V Beale, John H Beale, Claudio Cirelli, Philip J M Johnson, Florian S N Dworkowski, Dmitry Ozerov, Quentin Bertrand, Maximilian Wranik, Camila Bacellar, Sasa Bajt, Soichi Wakatsuki, Jonas A Sellberg, Nils Huse, Dusan Turk, Henry N Chapman, Thomas J Lane
Time-resolved crystallography captures light-driven DNA repair. Science (New York, N.Y.) 382 (6674) (2023)
James S Davies, Michael J Currie, Rachel A North, Mariafrancesca Scalise, Joshua D Wright, Jack M Copping, Daniela M Remus, Ashutosh Gulati, Dustin R Morado, Sam A Jamieson, Michael C Newton-Vesty, Gayan S Abeysekera, Subramanian Ramaswamy, Rosmarie Friemann, Soichi Wakatsuki, Jane R Allison, Cesare Indiveri, David Drew, Peter D Mace, Renwick C J Dobson
Structure and mechanism of a tripartite ATP-independent periplasmic TRAP transporter. Nature communications 14 (1) (2023)
Hasan DeMirci, Yashas Rao, Gabriele M Stoffel, Bastian Vögeli, Kristina Schell, Aharon Gomez, Alexander Batyuk, Cornelius Gati, Raymond G Sierra, Mark S Hunter, E Han Dao, Halil I Ciftci, Brandon Hayes, Fredric Poitevin, Po-Nan Li, Manat Kaur, Kensuke Tono, David Adrian Saez, Samuel Deutsch, Yasuo Yoshikuni, Helmut Grubmüller, Tobias J Erb, Esteban Vöhringer-Martinez, Soichi Wakatsuki
Intersubunit Coupling Enables Fast CO 2 -Fixation by Reductive Carboxylases. ACS central science 8 (8) (2022)
Kaiming Zhang, Naoki Horikoshi, Shanshan Li, Alexander S Powers, Mikhail A Hameedi, Grigore D Pintilie, Hee-Don Chae, Yousuf A Khan, Carl-Mikael Suomivuori, Ron O Dror, Kathleen M Sakamoto, Wah Chiu, Soichi Wakatsuki
Cryo-EM, Protein Engineering, and Simulation Enable the Development of Peptide Therapeutics against Acute Myeloid Leukemia. ACS central science 8 (2) (2022)
Mikhail A Hameedi, Erica T Prates, Michael R Garvin, Irimpan I Mathews, B Kirtley Amos, Omar Demerdash, Mark Bechthold, Mamta Iyer, Simin Rahighi, Daniel W Kneller, Andrey Y Kovalevsky, Stephan Irle, Van Quan Vuong, Julie C Mitchell, Audrey Labbe, Stephanie Galanie, Soichi Wakatsuki, Daniel A Jacobson
Structural and functional characterization of NEMO cleavage by SARS-CoV-2 3CLpro. Nature communications 13 (1) (2022)
Brian C Sanders, Suman Pokhrel, Audrey Labbe, Irimpan Mathews, Connor Cooper, Russell Davidson, Gwyndalyn Phillips, Kevin L Weiss, Qiu Zhang, Hugh Michael O'Neill, Manat Kaur, Lori Ferrins, Jurgen G Schmidt, Walter Reichard, Surekha Surendranathan, Jyothi Parvathareddy, Lexi Phillips, Christopher Rainville, David Sterner, Desigan Kumaran, Babak Andi, Gyorgy Babnigg, Nigel W Moriarty, Paul D Adams, Andrzej Joachimiak, Brett L Hurst, Suresh Kumar, Tauseef Butt, Colleen Jonsson, Soichi Wakatsuki, Stephanie Galanie, Martha Head, Jerry M Parks
Potent and Selective Covalent Inhibition of the Papain-like Protease from SARS-CoV-2. Research square (2022)
Brian Sanders, Suman Pohkrel, Audrey Labbe, Irimpan Mathews, Connor Cooper, Russell Davidson, Gwyndalyn Phillips, Kevin L Weiss, Qiu Zhang, Hugh Michael O'Neill, Manat Kaur, Lori Ferrins, Jurgen Schmidt, Walter Reichard, Surekha Surendranathan, Desigan Kumaran, Babak Andi, Gyorgy Babnigg, Nigel W Moriarty, Paul D Adams, Andrzej Joachimiak, Colleen Jonsson, Soichi Wakatsuki, Stephanie Galanie, Martha Head, Jerry M Parks
Potent and Selective Covalent Inhibitors of the Papain-like Protease from SARS-CoV-2. Research square (2021)
Naoki Horikoshi, Sunhee Hwang, Cornelius Gati, Tsutomu Matsui, Carlos Castillo-Orellana, Andrew G Raub, Adriana A Garcia, Fatemeh Jabbarpour, Alexander Batyuk, Joshua Broweleit, Xinyu Xiang, Andrew Chiang, Rachel Broweleit, Esteban Vöhringer-Martinez, Daria-Mochly Rosen, Soichi Wakatsuki
Long-range structural defects by pathogenic mutations in most severe glucose-6-phosphate dehydrogenase deficiency. Proceedings of the National Academy of Sciences of the United States of America 118 (4) (2021)
Colin J Comerci, Jonathan Herrmann, Joshua Yoon, Fatemeh Jabbarpour, Xiaofeng Zhou, John F Nomellini, John Smit, Lucy Shapiro, Soichi Wakatsuki, W E Moerner
Topologically-guided continuous protein crystallization controls bacterial surface layer self-assembly. Nature communications 10 (1) (2019)
Jonathan Herrmann, Po-Nan Li, Fatemeh Jabbarpour, Anson C K Chan, Ivan Rajkovic, Tsutomu Matsui, Lucy Shapiro, John Smit, Thomas M Weiss, Michael E P Murphy, Soichi Wakatsuki
A bacterial surface layer protein exploits multistep crystallization for rapid self-assembly. Proceedings of the National Academy of Sciences of the United States of America 117 (1) (2019)
Gabriele M M Stoffel, David Adrian Saez, Hasan DeMirci, Bastian Vögeli, Yashas Rao, Jan Zarzycki, Yasuo Yoshikuni, Soichi Wakatsuki, Esteban Vöhringer-Martinez, Tobias J Erb
Four amino acids define the CO2 binding pocket of enoyl-CoA carboxylases/reductases. Proceedings of the National Academy of Sciences of the United States of America 116 (28) (2019)

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Publication Activity (10 Years)

Top Topics

Top Venues

Soichi Wakatsuki