Tim Treis

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 6

Top Topics

Molecular Dynamics Simulations

Machine Learning

Pluripotent Stem Cells

Top Venues

Bioinformatics (Oxford, England)

Nature protocols

Journal of clinical medicine

This page only lists publications with an associated author ORCID identifier.

Publications

Mayar Ali, Merel Kuijs, Soroor Hediyeh-Zadeh, Tim Treis, Karin Hrovatin, Giovanni Palla, Anna C Schaar, Fabian Joachim Theis
GraphCompass: spatial metrics for differential analyses of cell organization across conditions. Bioinformatics (Oxford, England) 40 (Supplement_1) (2024)
Mayar Ali, Merel Kuijs, Soroor Hediyeh-Zadeh, Tim Treis, Karin Hrovatin, Giovanni Palla, Anna C Schaar, Fabian Joachim Theis
GraphCompass: spatial metrics for differential analyses of cell organization across conditions. Bioinformatics (Oxford, England) 40 (Supplement_1) (2024)
Luca Marconato, Giovanni Palla, Kevin A Yamauchi, Isaac Virshup, Elyas Heidari, Tim Treis, Wouter-Michiel Vierdag, Marcella Toth, Sonja Stockhaus, Rahul B Shrestha, Benjamin Rombaut, Lotte Pollaris, Laurens Lehner, Harald Vöhringer, Ilia Kats, Yvan Saeys, Sinem K Saka, Wolfgang Huber, Moritz Gerstung, Josh Moore, Fabian Joachim Theis, Oliver Stegle
SpatialData: an open and universal data framework for spatial omics. Nature methods (2024)
Mayar Ali, Merel Kuijs, Soroor Hediyeh-Zadeh, Tim Treis, Karin Hrovatin, Giovanni Palla, Anna C Schaar, Fabian Joachim Theis
GraphCompass: spatial metrics for differential analyses of cell organization across conditions. Bioinformatics (Oxford, England) 40 (Supplement_1) (2024)
Patrick Müller, Jacobo de la Cuesta-Zuluaga, Michael Kuhn, Maral Baghai Arassi, Tim Treis, Sonja Blasche, Michael Zimmermann, Peer Bork, Kiran Raosaheb Patil, Athanasios Typas, Sarela Garcia-Santamarina, Lisa Maier
High-throughput anaerobic screening for identifying compounds acting against gut bacteria in monocultures or communities. Nature protocols (2023)
Philipp L Müller, Tim Treis, Alexandru Odainic, Maximilian Pfau, Philipp Herrmann, Adnan Tufail, Frank G Holz
Prediction of Function in ABCA4-Related Retinopathy Using Ensemble Machine Learning. Journal of clinical medicine 9 (8) (2020)