Timothy B Sackton (Timothy Sackton)

ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 19

Top Venues

Genome biology and evolution

PLoS computational biology

Science (New York, N.Y.)

BMC bioinformatics

Harvard University

Cornell University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Harvard University

United States

Director of Bioinformatics :: Informatics Group

Harvard University

United States

Senior Bioinformatics Scientist :: Informatics Group

Education History

Cornell University

United States

PHD :: Ecology and Evolutionary Biology

Brown University

United States

BSC :: Biology

Publications

Adam H Freedman, Timothy B Sackton
Rethinking eco-evo studies of gene expression for non-model organisms in the genomic era. Molecular ecology (2024)
Patrick Gemmell, Timothy B Sackton, Scott V Edwards, Zhirui Hu
A phylogenetic method linking nucleotide substitution rates to rates of continuous trait evolution. PLoS computational biology 20 (4) (2024)
Scott V Edwards, Alison Cloutier, Glenn Cockburn, Robert J Driver, Phil Grayson, Kazutaka Katoh, Maude W Baldwin, Timothy B Sackton, Allan J Baker
A nuclear genome assembly of an extinct flightless bird, the little bush moa. Science advances 10 (21) (2024)
Patrick Gemmell, Timothy B Sackton, Scott V Edwards, Zhirui Hu
A phylogenetic method linking nucleotide substitution rates to rates of continuous trait evolution. PLoS computational biology 20 (4) (2024)
Patrick Gemmell, Timothy B Sackton, Scott V Edwards, Zhirui Hu
A phylogenetic method linking nucleotide substitution rates to rates of continuous trait evolution. PLoS computational biology 20 (4) (2024)
Patrick Gemmell, Timothy B Sackton, Scott V Edwards, Zhirui Hu
A phylogenetic method linking nucleotide substitution rates to rates of continuous trait evolution. PLoS computational biology 20 (4) (2024)
Han Yan, Zhirui Hui, Gregg W C Thomas, Scott V Edwards, Timothy B Sackton, Jun S Liu
PhyloAcc-GT: A Bayesian method for inferring patterns of substitution rate shifts on targeted lineages accounting for gene tree discordance. Molecular biology and evolution (2023)
Shoyo Sato, Tauana Junqueira Cunha, Bruno A S de Medeiros, Danielle E Khost, Timothy B Sackton, Gonzalo Giribet
Sizing up the onychophoran genome: repeats, introns, and gene family expansion contribute to genome gigantism in Epiperipatus broadwayi. Genome biology and evolution (2023)
Shoyo Sato, Tauana Junqueira Cunha, Bruno A S de Medeiros, Danielle E Khost, Timothy B Sackton, Gonzalo Giribet
Sizing Up the Onychophoran Genome: Repeats, Introns, and Gene Family Expansion Contribute to Genome Gigantism in Epiperipatus broadwayi. Genome biology and evolution 15 (3) (2023)
Keren R Sadanandan, Meng-Ching Ko, Gabriel W Low, Manfred Gahr, Scott V Edwards, Michael Hiller, Timothy B Sackton, Frank E Rheindt, Simon Yung Wa Sin, Maude W Baldwin
Convergence in hearing-related genes between echolocating birds and mammals. Proceedings of the National Academy of Sciences of the United States of America 120 (43) (2023)
Arianna Lord, Tauana J Cunha, Bruno A S de Medeiros, Shoyo Sato, Danielle E Khost, Timothy B Sackton, Gonzalo Giribet
Expanding on our knowledge of ecdysozoan genomes, a contiguous assembly of the meiofaunal priapulan Tubiluchus corallicola. Genome biology and evolution (2023)
Fabian Freund, Elise Kerdoncuff, Sebastian Matuszewski, Marguerite Lapierre, Marcel Hildebrandt, Jeffrey D Jensen, Luca Ferretti, Amaury Lambert, Timothy B Sackton, Guillaume Achaz
Interpreting the pervasive observation of U-shaped Site Frequency Spectra. PLoS genetics 19 (3) (2023)
Shoyo Sato, Tauana Junqueira Cunha, Bruno A S de Medeiros, Danielle E Khost, Timothy B Sackton, Gonzalo Giribet
Sizing Up the Onychophoran Genome: Repeats, Introns, and Gene Family Expansion Contribute to Genome Gigantism in Epiperipatus broadwayi. Genome biology and evolution 15 (3) (2023)
Yasuka Toda, Meng-Ching Ko, Qiaoyi Liang, Eliot T Miller, Alejandro Rico-Guevara, Tomoya Nakagita, Ayano Sakakibara, Kana Uemura, Timothy B Sackton, Takashi Hayakawa, Simon Yung Wa Sin, Yoshiro Ishimaru, Takumi Misaka, Pablo Oteiza, James D Crall, Scott V Edwards, William A Buttemer, Shuichi Matsumura, Maude W Baldwin
Early origin of sweet perception in the songbird radiation. Science (New York, N.Y.) 373 (6551) (2021)
Shaohong Feng, Josefin Stiller, Yuan Deng, Joel Armstrong, Qi Fang, Andrew Hart Reeve, Duo Xie, Guangii Chen, Chunxue Guo, Brant C Faircloth, Bent Petersen, Zongji Wang, Qi Zhou, Mark E Diekhans, Wanjun Chen, Sergio Andreu-Sánchez, Ashot Margaryan, Jason Travis Howard, Carole Parent, George Pacheco, Mikkel-Holger S Sinding, Lara C Puetz, Emily Louisa Cavill, Ângela M Ribeiro, Leopold Eckhart, Jon Fjeldså, Peter Andrew Hosner, Robb Thomas Brumfield, Les Christidis, Mads F Bertelsen, Thomas Sicheritz-Ponten, Dieter Thomas Tietze, Bruce C Robertson, Gang Song, Gerald Borgia, Santiago Claramunt, Irby J Lovette, Saul J Cowen, Peter Njoroge, John Philip Dumbacher, Oliver A Ryder, Jérôme Fuchs, Michael Bunce, David W Burt, Joel Cracraft, Guanliang Meng, Shannon J Hackett, Peter G Ryan, Knud Andreas Jønsson, Ian G Jamieson, Rute R da Fonseca, Edward L Braun, Peter Houde, Siavash Mirarab, Alexander Suh, Bengt Hansson, Suvi Ponnikas, Hanna Sigeman, Martin Stervander, Paul B Frandsen, Henriëtte van der Zwan, Rencia van der Sluis, Carina Visser, Christopher N Balakrishnan, Andrew G Clark, John W Fitzpatrick, Reed Bowman, Nancy Chen, Alison Cloutier, Timothy B Sackton, Scott V Edwards, Dustin J Foote, Subir B Shakya, Frederick H Sheldon, Alain Vignal, André Elias R Soares, Joshua D Kapp, Jacob Gonzalez-Solís, Joan Ferrer Obiol, Julio Rozas, Marta Riutort, Anna Tigano, Vicki Friesen, Love Dalen, Arraxi O Urrutia, Tomás Székely, Yang Liu, Michael G Campana, André Corvelo, Robert C Fleischer, Kim M Rutherford, Neil J Gemmell, Nicolas Dussex, Henrik Mouritsen, Nadine Thiele, Kira E Delmore, Miriam Liedvogel, Andre Franke, Marc P Hoeppner, Oliver Krone, Adam M Fudickar, Borja Milá, Ellen D Ketterson, Andrew Eric Fidler, Guillermo Friis, Ángela M Parody-Merino, Phil F Battley, Murray P Cox, Nicholas Costa Barroso Lima, Francisco Prosdocimi, Thomas Lee Parchman, Barney A Schlinger, Bette A Loiselle, John G Blake, Haw Chuan Lim, Lainy B Day, Matthew J Fuxjager, Maude W Baldwin, Michael J Braun, Morgan E Wirthlin, Rebecca B Dikow, T Brandt Ryder, Glauco Camenisch, Lukas F Keller, Jeffrey M DaCosta, Márk E Hauber, Matthew I M Louder, Christopher C Witt, Jimmy A McGuire, Joann Mudge, Libby C Megna, Matthew D Carling, Biao Wang, Scott A Taylor, Glaucia Del-Rio, Alexandre Aleixo, Ana Tereza Ribeiro de Vasconcelos, Claudio V Mello, Jason T Weir, David Haussler, Qiye Li, Huanming Yang, Jian Wang, Fumin Lei, Carsten Rahbek, Marcus Thomas Pius Gilbert, Gary R Graves, Erich D Jarvis, Benedict Paten, Guo-Jie Zhang
Dense sampling of bird diversity increases power of comparative genomics. Nature 587 (7833) (2020)
Adam H Freedman, John M Gaspar, Timothy B Sackton
Short paired-end reads trump long single-end reads for expression analysis. BMC bioinformatics 21 (1) (2020)
Adam H Freedman, Michele Clamp, Timothy B Sackton
Error, noise and bias in de novo transcriptome assemblies. Molecular ecology resources 21 (1) (2020)
Timothy B Sackton, Phil Grayson, Alison Cloutier, Zhirui Hu, Jun S Liu, Nicole E Wheeler, Paul P Gardner, Julia A Clarke, Allan J Baker, Michele Clamp, Scott V Edwards
Convergent regulatory evolution and loss of flight in paleognathous birds. Science (New York, N.Y.) 364 (6435) (2019)
Allison J Shultz, Timothy B Sackton
Immune genes are hotspots of shared positive selection across birds and mammals. eLife 8 (2019)

Timothy B Sackton.css-eqlu8i{font-size:small;padding-left:4px;} (Timothy Sackton)

Publication Activity (10 Years)

Top Topics

Top Venues

Timothy B Sackton (Timothy Sackton)