Xuemei Chen

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 60

Top Topics

Dna Methylation

Long Noncoding Rna

Arabidopsis Thaliana

Top Venues

Nature communications

Proceedings of the National Academy of Sciences of the United States of America

Plant physiology

This page only lists publications with an associated author ORCID identifier.

Publications

Guangyu Luo, Lin Li, Xiaoyu Yang, Yu Yu, Lei Gao, Beixin Mo, Xuemei Chen, Lin Liu
MicroRNA1432 regulates rice drought stress tolerance by targeting the CALMODULIN-LIKE2 gene. Plant physiology 195 (3) (2024)
Xufeng Wang, Dongli Yu, Jiancheng Yu, Hao Hu, Runlai Hang, Zachary Amador, Qi Chen, Jijie Chai, Xuemei Chen
Toll/interleukin-1 receptor (TIR) domain-containing proteins have NAD-RNA decapping activity. Nature communications 15 (1) (2024)
Guangyu Luo, Lin Li, Xiaoyu Yang, Yu Yu, Lei Gao, Beixin Mo, Xuemei Chen, Lin Liu
MicroRNA1432 regulates rice drought stress tolerance by targeting the CALMODULIN-LIKE2 gene. Plant physiology (2024)
Yutao Wang, Ning Wang, Jingqiu Lan, Yige Pan, Yidan Jiang, Yongqi Wu, Xuemei Chen, Xian-Zhong Feng, Genji Qin
Arabidopsis transcription factor TCP4 controls the identity of the apical gynoecium. The Plant cell 36 (7) (2024)
Xufeng Wang, Dongli Yu, Jiancheng Yu, Hao Hu, Runlai Hang, Zachary Amador, Qi Chen, Jijie Chai, Xuemei Chen
Toll/interleukin-1 receptor (TIR) domain-containing proteins have NAD-RNA decapping activity. Nature communications 15 (1) (2024)
Guangyu Luo, Lin Li, Xiaoyu Yang, Yu Yu, Lei Gao, Beixin Mo, Xuemei Chen, Lin Liu
MicroRNA1432 regulates rice drought stress tolerance by targeting the CALMODULIN-LIKE2 gene. Plant physiology 195 (3) (2024)
Yutao Wang, Ning Wang, Jingqiu Lan, Yige Pan, Yidan Jiang, Yongqi Wu, Xuemei Chen, Xian-Zhong Feng, Genji Qin
Arabidopsis transcription factor TCP4 controls the identity of the apical gynoecium. The Plant cell (2024)
Yutao Wang, Ning Wang, Jingqiu Lan, Yige Pan, Yidan Jiang, Yongqi Wu, Xuemei Chen, Xian-Zhong Feng, Genji Qin
Arabidopsis transcription factor TCP4 controls the identity of the apical gynoecium. The Plant cell 36 (7) (2024)
Xufeng Wang, Dongli Yu, Jiancheng Yu, Hao Hu, Runlai Hang, Zachary Amador, Qi Chen, Jijie Chai, Xuemei Chen
Toll/interleukin-1 receptor (TIR) domain-containing proteins have NAD-RNA decapping activity. Nature communications 15 (1) (2024)
Xufeng Wang, Dongli Yu, Jiancheng Yu, Hao Hu, Runlai Hang, Zachary Amador, Qi Chen, Jijie Chai, Xuemei Chen
Toll/interleukin-1 receptor (TIR) domain-containing proteins have NAD-RNA decapping activity. Nature communications 15 (1) (2024)
Yutao Wang, Ning Wang, Jingqiu Lan, Yige Pan, Yidan Jiang, Yongqi Wu, Xuemei Chen, Xian-Zhong Feng, Genji Qin
Arabidopsis transcription factor TCP4 controls the identity of the apical gynoecium. The Plant cell 36 (7) (2024)
Qing Sang, Lusheng Fan, Tianxiang Liu, Yongjian Qiu, Juan Du, Beixin Mo, Meng Chen, Xuemei Chen
MicroRNA156 conditions auxin sensitivity to enable growth plasticity in response to environmental changes in Arabidopsis. Nature communications 14 (1) (2023)
Ye Xu, Yong Zhang, Zhenfang Li, Alyssa K Soloria, Savannah Potter, Xuemei Chen
The N-terminal extension of Arabidopsis ARGONAUTE 1 is essential for microRNA activities. PLoS genetics 19 (3) (2023)
Nancy A Eckardt, Michael J Axtell, Andrea Barta, Xuemei Chen, Brian D Gregory, Hongwei Guo, Pablo Andrés Manavella, Rebecca A Mosher, Blake C Meyers
Focus on RNA biology. The Plant cell (2023)
Ye Xu, Yong Zhang, Zhenfang Li, Alyssa K Soloria, Savannah Potter, Xuemei Chen
The N-terminal extension of Arabidopsis ARGONAUTE 1 is essential for microRNA activities. PLoS genetics 19 (3) (2023)
Qing Sang, Lusheng Fan, Tianxiang Liu, Yongjian Qiu, Juan Du, Beixin Mo, Meng Chen, Xuemei Chen
MicroRNA156 conditions auxin sensitivity to enable growth plasticity in response to environmental changes in Arabidopsis. Nature communications 14 (1) (2023)
Qing Sang, Lusheng Fan, Tianxiang Liu, Yongjian Qiu, Juan Du, Beixin Mo, Meng Chen, Xuemei Chen
MicroRNA156 conditions auxin sensitivity to enable growth plasticity in response to environmental changes in Arabidopsis. Nature communications 14 (1) (2023)
Xufeng Wang, Dan Yuan, Yanchun Liu, Yameng Liang, Juan He, Xiaoyu Yang, Runlai Hang, Hong Jia, Beixin Mo, Feng Tian, Xuemei Chen, Lin Liu
INDETERMINATE1 autonomously regulates phosphate homeostasis upstream of the miR399-ZmPHO2 signaling module in maize. The Plant cell (2023)
Yong Zhang, Ye Xu, Todd H Skaggs, Jorge F S Ferreira, Xuemei Chen, Devinder Sandhu
Plant phase extraction: A method for enhanced discovery of the RNA-binding proteome and its dynamics in plants. The Plant cell (2023)
Ye Xu, Yong Zhang, Zhenfang Li, Alyssa K Soloria, Savannah Potter, Xuemei Chen
The N-terminal extension of Arabidopsis ARGONAUTE 1 is essential for microRNA activities. PLoS genetics 19 (3) (2023)
Yongbing Ren, Xuan Ma, Bo Song, Xiaolan Yang, You Chen, Yu Yu, Xuemei Chen, Beixin Mo, Xiaoyan Wang
HEN1 SUPPRESSOR1 stabilizes Pol IV RNAs via uridylation in Arabidopsis. Plant physiology (2023)
Runlai Hang, Ye Xu, Xufeng Wang, Hao Hu, Nora Flynn, Chenjiang You, Xuemei Chen
Arabidopsis HOT3/eIF5B1 constrains rRNA RNAi by facilitating 18S rRNA maturation. Proceedings of the National Academy of Sciences of the United States of America 120 (15) (2023)
Youra Hwang, Soeun Han, Chan Yul Yoo, Liu Hong, Chenjiang You, Brandon H Le, Hui Shi, Shangwei Zhong, Ute Hoecker, Xuemei Chen, Meng Chen
Anterograde signaling controls plastid transcription via sigma factors separately from nuclear photosynthesis genes. Nature communications 13 (1) (2022)
Lusheng Fan, Bin Gao, Ye Xu, Nora Flynn, Brandon Le, Chenjiang You, Shaofang Li, Natalia Achkar, Pablo Andrés Manavella, Zhenbiao Yang, Xuemei Chen
Arabidopsis AAR2, a conserved splicing factor in eukaryotes, acts in microRNA biogenesis. Proceedings of the National Academy of Sciences of the United States of America 119 (41) (2022)
Chao Liang, Qiang Cai, Fei Wang, Shaofang Li, Chenjiang You, Chi Xu, Lei Gao, Dechang Cao, Ting Lan, Bailong Zhang, Beixin Mo, Xuemei Chen
Arabidopsis RBV is a conserved WD40 repeat protein that promotes microRNA biogenesis and ARGONAUTE1 loading. Nature communications 13 (1) (2022)
Yuan Wang, Brandon H Le, Jianqiang Wang, Chenjiang You, Yonghui Zhao, Mary Galli, Ye Xu, Andrea Gallavotti, Thomas Eulgem, Beixin Mo, Xuemei Chen
ZMP recruits and excludes Pol IV-mediated DNA methylation in a site-specific manner. Science advances 8 (47) (2022)
Haoxuan Li, Chenjiang You, Manabu Yoshikawa, Xiaoyu Yang, Haiyong Gu, Chuanguo Li, Jie Cui, Xuemei Chen, Nenghui Ye, Jianhua Zhang, Guanqun Wang
A spontaneous thermo-sensitive female sterility mutation in rice enables fully mechanized hybrid breeding. Cell research 32 (10) (2022)
M Regina Scarpin, Michael Busche, Ryan E Martinez, Lisa C Harper, Leonore Reiser, Dóra Szakonyi, Catharina Merchante, Ting Lan, Wei Xiong, Beixin Mo, Guiliang Tang, Xuemei Chen, Julia Bailey-Serres, Karen S Browning, Jacob O Brunkard
An updated nomenclature for plant ribosomal protein genes. The Plant cell (2022)
Junchao Shi, Yunfang Zhang, Dongmei Tan, Xudong Zhang, Menghong Yan, Ying Zhang, Reuben Franklin, Marta N Shahbazi, Kirsty Mackinlay, Shichao Liu, Bernhard Kuhle, Emma R James, Liwen Zhang, Yongcun Qu, Qiwei Zhai, Wenxin Zhao, Linlin Zhao, Changcheng Zhou, Weifeng Gu, Jernej Murn, Jingtao Guo, Douglas T Carrell, Yinsheng Wang, Xuemei Chen, Bradley R Cairns, Xiang-Lei Yang, Paul Schimmel, Magdalena Zernicka Goetz, Sihem Cheloufi, Ying Zhang, Tong Zhou, Qi Chen
PANDORA-seq expands the repertoire of regulatory small RNAs by overcoming RNA modifications. Nature cell biology 23 (4) (2021)
Xuemei Chen, Oded Rechavi
Plant and animal small RNA communications between cells and organisms. Nature reviews. Molecular cell biology (2021)
Bailong Zhang, Xuemei Chen
Secrets of the MIR172 family in plant development and flowering unveiled. PLoS biology 19 (2) (2021)
Hao Hu, Nora Flynn, Hailei Zhang, Chenjiang You, Runlai Hang, Xufeng Wang, Huan Zhong, Zhu Long Chan, Yiji Xia, Xuemei Chen
SPAAC-NAD-seq, a sensitive and accurate method to profile NAD+-capped transcripts. Proceedings of the National Academy of Sciences of the United States of America 118 (13) (2021)
Hanyang Cai, Liping Liu, Man Zhang, Mengnan Chai, Youmei Huang, Fangqian Chen, Maokai Yan, Zhenxia Su, Ian R Henderson, Ravishankar Palanivelu, Xuemei Chen, Yuan Qin
Spatiotemporal control of miR398 biogenesis, via chromatin remodeling and kinase signaling, ensures proper ovule development. The Plant cell 33 (5) (2021)
Xiaoyu Yang, Chenjiang You, Xufeng Wang, Lei Gao, Beixin Mo, Lin Liu, Xuemei Chen
Widespread occurrence of microRNA-mediated target cleavage on membrane-bound polysomes. Genome biology 22 (1) (2021)
Chan Yul Yoo, Jiangman He, Qing Sang, Yongjian Qiu, Lingyun Long, Ruth Jean-Ae Kim, Emily G Chong, Joseph Hahm, Nicholas Morffy, Pei Zhou, Lucia C Strader, Akira Nagatani, Beixin Mo, Xuemei Chen, Meng Chen
Direct photoresponsive inhibition of a p53-like transcription activation domain in PIF3 by Arabidopsis phytochrome B. Nature communications 12 (1) (2021)
Linlin Luo, Xiaoyu Yang, Mingxi Guo, Ting Lan, Yu Yu, Beixin Mo, Xuemei Chen, Lei Gao, Lin Liu
TRANS-ACTING SIRNA3-derived short interfering RNAs confer cleavage of mRNAs in rice. Plant physiology (2021)
Wei Xiong, Jiancong Zhang, Ting Lan, Wenwen Kong, Xiaoyan Wang, Lin Liu, Xuemei Chen, Beixin Mo
High resolution RNA-seq profiling of genes encoding ribosomal proteins across different organs and developmental stages in Arabidopsis thaliana. Plant direct 5 (5) (2021)
Hailei Zhang, Huan Zhong, Xufeng Wang, Shoudong Zhang, Xiaojian Shao, Hao Hu, Zhi-Ling Yu, Zongwei Cai, Xuemei Chen, Yiji Xia
Use of NAD tagSeq II to identify growth phase-dependent alterations in E. coli RNA NAD+ capping. Proceedings of the National Academy of Sciences of the United States of America 118 (14) (2021)
Bailong Zhang, Chenjiang You, Yong Zhang, Liping Zeng, Jun Hu, Minglei Zhao, Xuemei Chen
Linking key steps of microRNA biogenesis by TREX-2 and the nuclear pore complex in Arabidopsis. Nature plants 6 (8) (2020)
Zhenxia Su, Nannan Wang, Zhimin Hou, Baiyang Li, Dingning Li, Yanhui Liu, Hanyang Cai, Yuan Qin, Xuemei Chen
Regulation of Female Germline Specification via Small RNA Mobility in Arabidopsis. The Plant cell 32 (9) (2020)
Qiang Cai, Chao Liang, Suikang Wang, Yingnan Hou, Lei Gao, Li Liu, Wenrong He, Wenbo Ma, Beixin Mo, Xuemei Chen
Author Correction: The disease resistance protein SNC1 represses the biogenesis of microRNAs and phased siRNAs. Nature communications 10 (1) (2019)
Weili Miao, Lin Li, Yonghui Zhao, Xiaoxia Dai, Xuemei Chen, Yinsheng Wang
HSP90 inhibitors stimulate DNAJB4 protein expression through a mechanism involving N6-methyladenosine. Nature communications 10 (1) (2019)
Chenjiang You, Wenrong He, Runlai Hang, Cuiju Zhang, Xiaofeng Cao, Hongwei Guo, Xuemei Chen, Jie Cui, Beixin Mo
FIERY1 promotes microRNA accumulation by suppressing rRNA-derived small interfering RNAs in Arabidopsis. Nature communications 10 (1) (2019)
Wei Xue, Sarah N Anderson, Xufeng Wang, Liyan Yang, Peter A Crisp, Qing Li, Jaclyn M Noshay, Patrice S Albert, James A Birchler, Paul Bilinski, Michelle C Stitzer, Jeffrey Ross-Ibarra, Sherry A Flint-Garcia, Xuemei Chen, Springer M Nathan, John F Doebley
Hybrid Decay: A Transgenerational Epigenetic Decline in Vigor and Viability Triggered in Backcross Populations of Teosinte with Maize. Genetics 213 (1) (2019)
Qiong Zhao, Jinbo Shen, Cai-Ji Gao, Yong Cui, Yongyi Wang, Jie Cui, Lixin Cheng, Wenhan Cao, Ying Zhu, Shuxian Huang, Qianzi Zhou, Cheuk Ka Leong, King Pong Leung, Xuemei Chen, Liwen Jiang
RST1 Is a FREE1 Suppressor That Negatively Regulates Vacuolar Trafficking in Arabidopsis. The Plant cell 31 (9) (2019)
Juan He, Zengming Jiang, Lei Gao, Chenjiang You, Xuan Ma, Xufeng Wang, Xiaofeng Xu, Beixin Mo, Xuemei Chen, Lin Liu
Genome-Wide Transcript and Small RNA Profiling Reveals Transcriptomic Responses to Heat Stress. Plant physiology 181 (2) (2019)
Yuan Wang, Shaofang Li, Yonghui Zhao, Chenjiang You, Brandon Le, Zhizhong Gong, Beixin Mo, Yiji Xia, Xuemei Chen
NAD+-capped RNAs are widespread in the Arabidopsis transcriptome and can probably be translated. Proceedings of the National Academy of Sciences of the United States of America 116 (24) (2019)
Hailei Zhang, Huan Zhong, Shoudong Zhang, Xiaojian Shao, Min Ni, Zongwei Cai, Xuemei Chen, Yiji Xia
NAD tagSeq reveals that NAD+-capped RNAs are mostly produced from a large number of protein-coding genes in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America 116 (24) (2019)
Jianbo Song, Xiaoyan Wang, Bo Song, Lei Gao, Xiaowei Mo, Luming Yue, Haiqi Yang, Jiayun Lu, Guodong Ren, Beixin Mo, Xuemei Chen
Prevalent cytidylation and uridylation of precursor miRNAs in Arabidopsis. Nature plants 5 (12) (2019)
Suikang Wang, Li Quan, Shaofang Li, Chenjiang You, Yong Zhang, Lei Gao, Liping Zeng, Lin Liu, YanHua Qi, Beixin Mo, Xuemei Chen
The PROTEIN PHOSPHATASE4 Complex Promotes Transcription and Processing of Primary microRNAs in Arabidopsis. The Plant cell 31 (2) (2019)
Lin Liu, Xuemei Chen
Intercellular and systemic trafficking of RNAs in plants. Nature plants 4 (11) (2018)
Qili Fei, Yu Yu, Li Liu, Yu Zhang, Patricia Baldrich, Qing Dai, Xuemei Chen, Blake C Meyers
Biogenesis of a 22-nt microRNA in Phaseoleae species by precursor-programmed uridylation. Proceedings of the National Academy of Sciences of the United States of America 115 (31) (2018)
Qiang Cai, Chao Liang, Suikang Wang, Yingnan Hou, Lei Gao, Li Liu, Wenrong He, Wenbo Ma, Beixin Mo, Xuemei Chen
The disease resistance protein SNC1 represses the biogenesis of microRNAs and phased siRNAs. Nature communications 9 (1) (2018)
Chenjiang You, Jie Cui, Hui Wang, Xinping Qi, Li-Yaung Kuo, Hong Ma, Lei Gao, Beixin Mo, Xuemei Chen
Conservation and divergence of small RNA pathways and microRNAs in land plants. Genome biology 18 (1) (2017)
Dongming Li, Ana Marie S Palanca, So Youn Won, Lei Gao, Ying Feng, Ajay A Vashisht, Li Liu, Yuanyuan Zhao, Xigang Liu, Xiuyun Wu, Shaofang Li, Brandon Le, Yun Ju Kim, Guodong Yang, Shengben Li, Jinyuan Liu, James A Wohlschlegel, Hongwei Guo, Beixin Mo, Xuemei Chen, Julie A Law
The MBD7 complex promotes expression of methylated transgenes without significantly altering their methylation status. eLife 6 (2017)
Yu Yu, Lijuan Ji, Brandon H Le, Jixian Zhai, Jiayi Chen, Elizabeth Luscher, Lei Gao, Chunyan Liu, Xiaofeng Cao, Beixin Mo, Jinbiao Ma, Blake C Meyers, Xuemei Chen
ARGONAUTE10 promotes the degradation of miR165/6 through the SDN1 and SDN2 exonucleases in Arabidopsis. PLoS biology 15 (2) (2017)
Lihua Zhao, Hanyang Cai, Zhenxia Su, Lulu Wang, Xinyu Huang, Man Zhang, Piaojuan Chen, Xiaozhuan Dai, Heming Zhao, Ravishankar Palanivelu, Xuemei Chen, Yuan Qin
KLU suppresses megasporocyte cell fate through SWR1-mediated activation of WRKY28 expression in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America 115 (3) (2017)
Tianran Jia, Bailong Zhang, Chenjiang You, Yong Zhang, Liping Zeng, Shengjun Li, Kaeli C M Johnson, Bin Yu, Xin Li, Xuemei Chen
The Arabidopsis MOS4-Associated Complex Promotes MicroRNA Biogenesis and Precursor Messenger RNA Splicing. The Plant cell 29 (10) (2017)
Shengben Li, Brandon Le, Xuan Ma, Shaofang Li, Chenjiang You, Yu Yu, Bailong Zhang, Lin Liu, Lei Gao, Ting Shi, Yonghui Zhao, Beixin Mo, Xiaofeng Cao, Xuemei Chen
Biogenesis of phased siRNAs on membrane-bound polysomes in Arabidopsis. eLife 5 (2016)
Yun Ju Kim, Ruozhong Wang, Lei Gao, Dongming Li, Chi Xu, Hyunggon Mang, Jien Jeon, Xiangsong Chen, Xuehua Zhong, June M Kwak, Beixin Mo, Langtao Xiao, Xuemei Chen
POWERDRESS and HDA9 interact and promote histone H3 deacetylation at specific genomic sites in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America 113 (51) (2016)