Zhijun Duan (Z Duan)

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 15

Top Topics

Dna Methylation

Saccharomyces Cerevisiae

Mesenchymal Stem Cells

Top Venues

Nature genetics

Nature communications

Nature protocols

Proceedings of the National Academy of Sciences of the United States of America

This page only lists publications with an associated author ORCID identifier.

Publications

Tianming Zhou, Ruochi Zhang, Deyong Jia, Raymond T Doty, Adam D Munday, Daniel Gao, Li Xin, Janis L Abkowitz, Zhijun Duan, Jian Ma
GAGE-seq concurrently profiles multiscale 3D genome organization and gene expression in single cells. Nature genetics (2024)
Tianming Zhou, Ruochi Zhang, Deyong Jia, Raymond T Doty, Adam D Munday, Daniel Gao, Li Xin, Janis L Abkowitz, Zhijun Duan, Jian Ma
GAGE-seq concurrently profiles multiscale 3D genome organization and gene expression in single cells. Nature genetics (2024)
Tianming Zhou, Ruochi Zhang, Deyong Jia, Raymond T Doty, Adam D Munday, Daniel Gao, Li Xin, Janis L Abkowitz, Zhijun Duan, Jian Ma
GAGE-seq concurrently profiles multiscale 3D genome organization and gene expression in single cells. Nature genetics (2024)
Tianming Zhou, Ruochi Zhang, Deyong Jia, Raymond T Doty, Adam D Munday, Daniel Gao, Li Xin, Janis L Abkowitz, Zhijun Duan, Jian Ma
GAGE-seq concurrently profiles multiscale 3D genome organization and gene expression in single cells. Nature genetics (2024)
Tianming Zhou, Ruochi Zhang, Deyong Jia, Raymond T Doty, Adam D Munday, Daniel Gao, Li Xin, Janis L Abkowitz, Zhijun Duan, Jian Ma
GAGE-seq concurrently profiles multiscale 3D genome organization and gene expression in single cells. Nature genetics 56 (8) (2024)
Tianming Zhou, Ruochi Zhang, Deyong Jia, Raymond T Doty, Adam D Munday, Daniel Gao, Li Xin, Janis L Abkowitz, Zhijun Duan, Jian Ma
GAGE-seq concurrently profiles multiscale 3D genome organization and gene expression in single cells. Nature genetics 56 (8) (2024)
Tianming Zhou, Ruochi Zhang, Deyong Jia, Raymond T Doty, Adam D Munday, Daniel Gao, Li Xin, Janis L Abkowitz, Zhijun Duan, Jian Ma
GAGE-seq concurrently profiles multiscale 3D genome organization and gene expression in single cells. Nature genetics 56 (8) (2024)
Tianming Zhou, Ruochi Zhang, Deyong Jia, Raymond T Doty, Adam D Munday, Daniel Gao, Li Xin, Janis L Abkowitz, Zhijun Duan, Jian Ma
GAGE-seq concurrently profiles multiscale 3D genome organization and gene expression in single cells. Nature genetics 56 (8) (2024)
Tianming Zhou, Ruochi Zhang, Deyong Jia, Raymond T Doty, Adam D Munday, Daniel Gao, Li Xin, Janis L Abkowitz, Zhijun Duan, Jian Ma
Concurrent profiling of multiscale 3D genome organization and gene expression in single mammalian cells. bioRxiv : the preprint server for biology (2023)
He Fang, Giancarlo Bonora, Jordan P Lewandowski, Jitendra Thakur, Galina N Filippova, Steven Henikoff, Jay Shendure, Zhijun Duan, John L Rinn, Xinxian Deng, William Stafford Noble, Christine M Disteche
Trans- and cis-acting effects of Firre on epigenetic features of the inactive X chromosome. Nature communications 11 (1) (2020)
Hyeon-Jin Kim, Galip Gürkan Yardimci, Giancarlo Bonora, Vijay Ramani, Jie Liu, Ruolan Qiu, Choli Lee, Jennifer Hesson, Carol B Ware, Jay Shendure, Zhijun Duan, William Stafford Noble
Capturing cell type-specific chromatin compartment patterns by applying topic modeling to single-cell Hi-C data. PLoS computational biology 16 (9) (2020)
Giancarlo Bonora, X Deng, H Fang, V Ramani, R Qiu, J B Berletch, G N Filippova, Zhijun Duan, J Shendure, William Stafford Noble, Christine M Disteche
Orientation-dependent Dxz4 contacts shape the 3D structure of the inactive X chromosome. Nature communications 9 (1) (2018)
Vijay Ramani, Xinxian Deng, Ruolan Qiu, Kevin L Gunderson, Frank J Steemers, Christine M Disteche, William Stafford Noble, Zhijun Duan, Jay Shendure
Massively multiplex single-cell Hi-C. Nature methods 14 (3) (2017)
Umut Eser, Devon Chandler-Brown, Ferhat Ay, Aaron F Straight, Zhijun Duan, William Stafford Noble, Jan M Skotheim
Form and function of topologically associating genomic domains in budding yeast. Proceedings of the National Academy of Sciences of the United States of America 114 (15) (2017)
Vijay Ramani, Darren A Cusanovich, Ronald J Hause, Wenxiu Ma, Ruolan Qiu, Xinxian Deng, C Anthony Blau, Christine M Disteche, William S Noble, Jay Shendure, Zhijun Duan
Mapping 3D genome architecture through in situ DNase Hi-C. Nature protocols 11 (11) (2016)