Ahmad S Khalil

ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 30

Top Venues

Science (New York, N.Y.)

Nature communications

bioRxiv : the preprint server for biology

ACS synthetic biology

Boston University

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Boston University Jan 01 2012

United States

Assistant Professor :: Biomedical Engineering

Publications

Rocco D'Amato, Chrysanthi Taxiarchi, Marco Galardini, Alessandro Trusso, Roxana L Minuz, Silvia Grilli, Alastair G T Somerville, Dammy Shittu, Ahmad S Khalil, Roberto Galizi, Andrea Crisanti, Alekos Simoni, Ruth Müller
Anti-CRISPR Anopheles mosquitoes inhibit gene drive spread under challenging behavioural conditions in large cages. Nature communications 15 (1) (2024)
Rocco D'Amato, Chrysanthi Taxiarchi, Marco Galardini, Alessandro Trusso, Roxana L Minuz, Silvia Grilli, Alastair G T Somerville, Dammy Shittu, Ahmad S Khalil, Roberto Galizi, Andrea Crisanti, Alekos Simoni, Ruth Müller
Anti-CRISPR Anopheles mosquitoes inhibit gene drive spread under challenging behavioural conditions in large cages. Nature communications 15 (1) (2024)
Edwin N Neumann, Tessa M Bertozzi, Elaine Wu, Fiona Serack, John W Harvey, Pamela P Brauer, Catherine P Pirtle, Alissa Coffey, Michael Howard, Nikita Kamath, Kenney Lenz, Kenia Guzman, Michael H Raymond, Ahmad S Khalil, Benjamin E Deverman, Eric Vallabh Minikel, Sonia M Vallabh, Jonathan S Weissman
Brainwide silencing of prion protein by AAV-mediated delivery of an engineered compact epigenetic editor. Science (New York, N.Y.) 384 (6703) (2024)
Edwin N Neumann, Tessa M Bertozzi, Elaine Wu, Fiona Serack, John W Harvey, Pamela P Brauer, Catherine P Pirtle, Alissa Coffey, Michael Howard, Nikita Kamath, Kenney Lenz, Kenia Guzman, Michael H Raymond, Ahmad S Khalil, Benjamin E Deverman, Eric Vallabh Minikel, Sonia M Vallabh, Jonathan S Weissman
Brainwide silencing of prion protein by AAV-mediated delivery of an engineered compact epigenetic editor. Science (New York, N.Y.) 384 (6703) (2024)
Rocco D'Amato, Chrysanthi Taxiarchi, Marco Galardini, Alessandro Trusso, Roxana L Minuz, Silvia Grilli, Alastair G T Somerville, Dammy Shittu, Ahmad S Khalil, Roberto Galizi, Andrea Crisanti, Alekos Simoni, Ruth Müller
Anti-CRISPR Anopheles mosquitoes inhibit gene drive spread under challenging behavioural conditions in large cages. Nature communications 15 (1) (2024)
Ajay Larkin, Colin Kunze, Melissa Seman, Alexander Levashkevich, Justin Curran, Ahmad S Khalil, Kaushik Ragunathan
Mapping the dynamics of epigenetic adaptation. bioRxiv : the preprint server for biology (2023)
Daniel Garc A-Ruano, Akanksha Jain, Zachary J Heins, Brandon G Wong, Ezira Yimer Wolle, Ahmad S Khalil, Damien Coudreuse
Long-term evolution of proliferating yeast cells using the eVOLVER platform. bioRxiv : the preprint server for biology (2023)
Daniel Garc A-Ruano, Akanksha Jain, Zachary J Heins, Brandon G Wong, Ezira Yimer Wolle, Ahmad S Khalil, Damien Coudreuse
Long-term evolution of proliferating cells using the eVOLVER platform. Open biology 13 (7) (2023)
Indorica Sutradhar, Carly Ching, Darash Desai, Zachary Heins, Ahmad S Khalil, Muhammad H Zaman
Effects of Antibiotic Interaction on Antimicrobial Resistance Development in Wastewater. bioRxiv : the preprint server for biology (2023)
Indorica Sutradhar, Carly Ching, Darash Desai, Zachary Heins, Ahmad S Khalil, Muhammad H Zaman
Effects of Antibiotic Interaction on Antimicrobial Resistance Development in Wastewater. bioRxiv : the preprint server for biology (2023)
Indorica Sutradhar, Carly Ching, Darash Desai, Zachary Heins, Ahmad S Khalil, Muhammad H Zaman
Effects of Antibiotic Interaction on Antimicrobial Resistance Development in Wastewater. bioRxiv : the preprint server for biology (2023)
Heidi E Klumpe, Jean-Baptiste Lugagne, Ahmad S Khalil, Mary J Dunlop
Deep Neural Networks for Predicting Single-Cell Responses and Probability Landscapes. ACS synthetic biology (2023)
William M Shaw, Ahmad S Khalil, Tom Ellis
A Multiplex MoClo Toolkit for Extensive and Flexible Engineering of Saccharomyces cerevisiae . ACS synthetic biology (2023)
Hui-Shan Li, Divya V Israni, Keith A Gagnon, Kok Ann Gan, Michael H Raymond, Jeffry D Sander, Kole T Roybal, J Keith Joung, Wilson W Wong, Ahmad S Khalil
Multidimensional control of therapeutic human cell function with synthetic gene circuits. Science (New York, N.Y.) 378 (6625) (2022)
Adam Sanford, Szilvia Kiriakov, Ahmad S Khalil
A Toolkit for Precise, Multigene Control in Saccharomyces cerevisiae . ACS synthetic biology (2022)
Tony P Huang, Zachary J Heins, Shannon M Miller, Brandon G Wong, Pallavi A Balivada, Tina Wang, Ahmad S Khalil, David R Liu
High-throughput continuous evolution of compact Cas9 variants targeting single-nucleotide-pyrimidine PAMs. Nature biotechnology (2022)
William M Shaw, Yunfeng Zhang, Xinyu Lu, Ahmad S Khalil, Graham Ladds, Xiaozhou Luo, Tom Ellis
Screening microbially produced Δ 9 -tetrahydrocannabinol using a yeast biosensor workflow. Nature communications 13 (1) (2022)
Hui-Shan Li, Divya V Israni, Keith A Gagnon, Kok Ann Gan, Michael H Raymond, Jeffry D Sander, Kole T Roybal, J Keith Joung, Wilson W Wong, Ahmad S Khalil
Multidimensional control of therapeutic human cell function with synthetic gene circuits. Science (New York, N.Y.) 378 (6625) (2022)
Hui-Shan Li, Divya V Israni, Keith A Gagnon, Kok Ann Gan, Michael H Raymond, Jeffry D Sander, Kole T Roybal, J Keith Joung, Wilson W Wong, Ahmad S Khalil
Multidimensional control of therapeutic human cell function with synthetic gene circuits. Science (New York, N.Y.) 378 (6625) (2022)
Hui-Shan Li, Divya V Israni, Keith A Gagnon, Kok Ann Gan, Michael H Raymond, Jeffry D Sander, Kole T Roybal, J Keith Joung, Wilson W Wong, Ahmad S Khalil
Multidimensional control of therapeutic human cell function with synthetic gene circuits. Science (New York, N.Y.) 378 (6625) (2022)
Hui-Shan Li, Divya V Israni, Keith A Gagnon, Kok Ann Gan, Michael H Raymond, Jeffry D Sander, Kole T Roybal, J Keith Joung, Wilson W Wong, Ahmad S Khalil
Multidimensional control of therapeutic human cell function with synthetic gene circuits. Science (New York, N.Y.) 378 (6625) (2022)
Hui-Shan Li, Divya V Israni, Keith A Gagnon, Kok Ann Gan, Michael H Raymond, Jeffry D Sander, Kole T Roybal, J Keith Joung, Wilson W Wong, Ahmad S Khalil
Multidimensional control of therapeutic human cell function with synthetic gene circuits. Science (New York, N.Y.) 378 (6625) (2022)
Qing Sun, Nicole M Vega, Bernardo Cervantes, Christopher P Mancuso, Ning Mao, Megan N Taylor, James J Collins, Ahmad S Khalil, Jeff Gore, Timothy K Lu
Enhancing nutritional niche and host defenses by modifying the gut microbiome. Molecular systems biology 18 (11) (2022)
Christopher P Mancuso, Hyunseok Lee, Clare I Abreu, Jeff Gore, Ahmad S Khalil
Environmental fluctuations reshape an unexpected diversity-disturbance relationship in a microbial community. eLife 10 (2021)
Ziwei Zhong, Brandon G Wong, Arjun Ravikumar, Garri A Arzumanyan, Ahmad S Khalil, Chang C Liu
Automated Continuous Evolution of Proteins in Vivo. ACS synthetic biology 9 (6) (2020)
Jason Qian, Zhi-xiang Lu, Christopher P Mancuso, Han-Ying Jhuang, Rocío C Barajas-Ornelas, Sarah A Boswell, Fernando H Ramírez-Guadiana, Victoria Jones, Akhila Sonti, Kole Sedlack, Lior Artzi, Giyoung Jung, Mohammad Arammash, Mary E Pettit, Michael Melfi, Lorena Lyon, Siân V Owen, Michael H Baym, Ahmad S Khalil, Pamela A Silver, David Z Rudner, Michael Springer
Barcoded microbial system for high-resolution object provenance. Science (New York, N.Y.) 368 (6495) (2020)
Henry H Lee, Nili Ostrov, Brandon G Wong, Michaela A Gold, Ahmad S Khalil, George M Church
Functional genomics of the rapidly replicating bacterium Vibrio natriegens by CRISPRi. Nature microbiology 4 (7) (2019)
Caleb J Bashor, Nikit Patel, Sandeep Choubey, Ali Beyzavi, Jané Kondev, James J Collins, Ahmad S Khalil
Complex signal processing in synthetic gene circuits using cooperative regulatory assemblies. Science (New York, N.Y.) 364 (6440) (2019)
Brandon G Wong, Christopher P Mancuso, Szilvia Kiriakov, Caleb J Bashor, Ahmad S Khalil
Precise, automated control of conditions for high-throughput growth of yeast and bacteria with eVOLVER. Nature biotechnology 36 (7) (2018)
Zohar B Weinstein, Nurdan Kuru, Szilvia Kiriakov, Adam C Palmer, Ahmad S Khalil, Paul A Clemons, Muhammad H Zaman, Frederick P Roth, Murat Cokol
Modeling the impact of drug interactions on therapeutic selectivity. Nature communications 9 (1) (2018)

Ahmad S Khalil.css-eqlu8i{font-size:small;padding-left:4px;}

Publication Activity (10 Years)

Top Topics

Top Venues

Ahmad S Khalil