Anniina Farkkila (A Färkkilä, Anniina Färkkilä)

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 18

Top Topics

Chemotherapy Induced

Top Venues

Nature communications

NPJ precision oncology

bioRxiv : the preprint server for biology

Clinical cancer research : an official journal of the American Association for Cancer Research

This page only lists publications with an associated author ORCID identifier.

Publications

Jun Dai, Shuyu Zheng, Matias M Falco, Jie Bao, Johanna Eriksson, Sanna Pikkusaari, Sofia Forstén, Jing Jiang, Wenyu Wang, Luping Gao, Fernando Pérez-Villatoro, Olli Dufva, Khalid Saeed, Yinyin Wang, Ali Amiryousefi, Anniina Farkkila, Mohamed El Missiry, Liisa Kauppi, Jing Tang, Anna Vaharautio
Tracing back primed resistance in cancer via sister cells. Nature communications 15 (1) (2024)
Jun Dai, Shuyu Zheng, Matias M Falco, Jie Bao, Johanna Eriksson, Sanna Pikkusaari, Sofia Forstén, Jing Jiang, Wenyu Wang, Luping Gao, Fernando Pérez-Villatoro, Olli Dufva, Khalid Saeed, Yinyin Wang, Ali Amiryousefi, Anniina Farkkila, Mohamed El Missiry, Liisa Kauppi, Jing Tang, Anna Vaharautio
Tracing back primed resistance in cancer via sister cells. Nature communications 15 (1) (2024)
Inga-Maria Launonen, Erdogan Pekcan Erkan, Iga Niemiec, Ada Junquera, María Hincapié-Otero, Daria Afenteva, Zhihan Liang, Matilda Salko, Angela Szabo, Fernando Pérez-Villatoro, Matias M Falco, Yilin Li, Giulia Micoli, Ashwini S Nagaraj, Ulla-Maija Haltia, Essi Kahelin, Jaana Oikkonen, Johanna Hynninen, Anni Virtanen, Ajit J Nirmal, Tuulia Vallius, Sampsa Hautaniemi, Peter Karl Sorger, Anna Vaharautio, Anniina Farkkila
Chemotherapy induces myeloid-driven spatial T-cell exhaustion in ovarian cancer. bioRxiv : the preprint server for biology (2024)
Jun Dai, Shuyu Zheng, Matias M Falco, Jie Bao, Johanna Eriksson, Sanna Pikkusaari, Sofia Forstén, Jing Jiang, Wenyu Wang, Luping Gao, Fernando Pérez-Villatoro, Olli Dufva, Khalid Saeed, Yinyin Wang, Ali Amiryousefi, Anniina Farkkila, Mohamed El Missiry, Liisa Kauppi, Jing Tang, Anna Vaharautio
Tracing back primed resistance in cancer via sister cells. Nature communications 15 (1) (2024)
Inga-Maria Launonen, Erdogan Pekcan Erkan, Iga Niemiec, Ada Junquera, María Hincapié-Otero, Daria Afenteva, Zhihan Liang, Matilda Salko, Angela Szabo, Fernando Pérez-Villatoro, Matias M Falco, Yilin Li, Giulia Micoli, Ashwini S Nagaraj, Ulla-Maija Haltia, Essi Kahelin, Jaana Oikkonen, Johanna Hynninen, Anni Virtanen, Ajit J Nirmal, Tuulia Vallius, Sampsa Hautaniemi, Peter Karl Sorger, Anna Vaharautio, Anniina Farkkila
Chemotherapy induces myeloid-driven spatial T-cell exhaustion in ovarian cancer. bioRxiv : the preprint server for biology (2024)
Inga-Maria Launonen, Erdogan Pekcan Erkan, Iga Niemiec, Ada Junquera, María Hincapié-Otero, Daria Afenteva, Zhihan Liang, Matilda Salko, Angela Szabo, Fernando Pérez-Villatoro, Matias M Falco, Yilin Li, Giulia Micoli, Ashwini S Nagaraj, Ulla-Maija Haltia, Essi Kahelin, Jaana Oikkonen, Johanna Hynninen, Anni Virtanen, Ajit J Nirmal, Tuulia Vallius, Sampsa Hautaniemi, Peter Karl Sorger, Anna Vaharautio, Anniina Farkkila
Chemotherapy induces myeloid-driven spatial T-cell exhaustion in ovarian cancer. bioRxiv : the preprint server for biology (2024)
Sanna Pikkusaari, Manuela Tumiati, Anni Virtanen, Jaana Oikkonen, Yilin Li, Fernando Pérez-Villatoro, Taru A Muranen, Matilda Salko, Kaisa Huhtinen, Anna Kanerva, Heidi Koskela, Johanna Tapper, Riitta Koivisto-Korander, Titta Joutsiniemi, Ulla-Maija Haltia, Heini Lassus, Sampsa Hautaniemi, Anniina Farkkila, Johanna Hynninen, Sakari Hietanen, Olli Carpen, Liisa Kauppi
Functional homologous recombination assay on FFPE specimens of advanced high-grade serous ovarian cancer predicts clinical outcomes. Clinical cancer research : an official journal of the American Association for Cancer Research (2023)
Inga-Maria Launonen, N Lyytikäinen, Julia Casado, E A Anttila, A Szabó, U-M Haltia, Connor A Jacobson, J R Lin, Z Maliga, B E Howitt, K C Strickland, Sandro Santagata, K Elias, Alan D' Andrea, Panagiotis A Konstantinopoulos, Peter Karl Sorger, Anniina Farkkila
Single-cell tumor-immune microenvironment of BRCA1/2 mutated high-grade serous ovarian cancer. Nature communications 13 (1) (2022)
Fernando Pérez-Villatoro, Jaana Oikkonen, Julia Casado, Anastasiya Chernenko, Doga C Gulhan, Manuela Tumiati, Yilin Li, Kari Lavikka, Sakari Hietanen, Johanna Hynninen, Ulla-Maija Haltia, Jaakko S Tyrmi, Finnpec Hannele Laivuori, Panagiotis A Konstantinopoulos, Sampsa Hautaniemi, Liisa Kauppi, Anniina Farkkila
Optimized detection of homologous recombination deficiency improves the prediction of clinical outcomes in cancer. NPJ precision oncology 6 (1) (2022)
Chang-Suk Chae, Tito A Sandoval, Sung-Min Hwang, Eun Sil Park, Paolo Giovanelli, Deepika Awasthi, Camilla Salvagno, Alexander Emmanuelli, Chen Tan, Vidyanath Chaudhary, Julia Casado, Andrew V Kossenkov, Minkyung Song, Franck J Barrat, Kevin Holcomb, E Alfonso Romero-Sandoval, Dmitriy Zamarin, David Pépin, Alan D' Andrea, Anniina Farkkila, Juan R Cubillos-Ruiz
Tumor-Derived Lysophosphatidic Acid Blunts Protective Type I Interferon Responses in Ovarian Cancer. Cancer discovery 12 (8) (2022)
Fernando Pérez-Villatoro, Jaana Oikkonen, Julia Casado, Anastasiya Chernenko, Doga C Gulhan, Manuela Tumiati, Yilin Li, Kari Lavikka, Sakari Hietanen, Johanna Hynninen, Ulla-Maija Haltia, Jaakko S Tyrmi, Finnpec Hannele Laivuori, Panagiotis A Konstantinopoulos, Sampsa Hautaniemi, Liisa Kauppi, Anniina Farkkila
Optimized detection of homologous recombination deficiency improves the prediction of clinical outcomes in cancer. NPJ precision oncology 6 (1) (2022)
Fernando Pérez-Villatoro, Jaana Oikkonen, Julia Casado, Anastasiya Chernenko, Doga C Gulhan, Manuela Tumiati, Yilin Li, Kari Lavikka, Sakari Hietanen, Johanna Hynninen, Ulla-Maija Haltia, Jaakko S Tyrmi, Finnpec Hannele Laivuori, Panagiotis A Konstantinopoulos, Sampsa Hautaniemi, Liisa Kauppi, Anniina Farkkila
Optimized detection of homologous recombination deficiency improves the prediction of clinical outcomes in cancer. NPJ precision oncology 6 (1) (2022)
Panagiotis A Konstantinopoulos, Alexandre Andre Balieiro Anastacio da Costa, Doga Gulhan, Elizabeth K Lee, Su-Chun Cheng, Andrea E Wahner Hendrickson, Bose Kochupurakkal, David L Kolin, Elise C Kohn, Joyce F Liu, Elizabeth H Stover, Jennifer Curtis, Nabihah Tayob, Madeline Polak, Dipanjan Chowdhury, Ursula A Matulonis, Anniina Farkkila, Alan D' Andrea, Geoffrey I Shapiro
A Replication stress biomarker is associated with response to gemcitabine versus combined gemcitabine and ATR inhibitor therapy in ovarian cancer. Nature communications 12 (1) (2021)
Anniina Farkkila, Alfredo Rodríguez, Jaana Oikkonen, Doga C Gulhan, Huy Nguyen, Julieta Domínguez, Sandra Ramos, Caitlin E Mills, Fernando Pérez-Villatoro, Jean-Bernard Lazaro, Jia Zhou, Connor S Clairmont, Lisa A Moreau, Peter J Park, Peter Karl Sorger, Sampsa Hautaniemi, Sara Frías, Alan D' Andrea
Heterogeneity and Clonal Evolution of Acquired PARP Inhibitor Resistance in TP53- and BRCA1-Deficient Cells. Cancer research 81 (10) (2021)
Anniina Farkkila, Doga C Gulhan, Julia Casado, Connor A Jacobson, Huy Nguyen, Bose Kochupurakkal, Zoltan Maliga, Clarence Yapp, Yu-An Chen, Denis Schapiro, Yinghui Zhou, Julie R Graham, Bruce J Dezube, Pamela N Munster, Sandro Santagata, Elizabeth Garcia, Scott Rodig, Ana Lako, Dipanjan Chowdhury, Geoffrey I Shapiro, Ursula A Matulonis, Peter J Park, Sampsa Hautaniemi, Peter Karl Sorger, Elizabeth M Swisher, Alan D' Andrea, Panagiotis A Konstantinopoulos
Author Correction: Immunogenomic profiling determines responses to combined PARP and PD-1 inhibition in ovarian cancer. Nature communications 11 (1) (2020)
Sonia Iyer, Shuang Zhang, Simge Yucel, Heiko Horn, Sean G Smith, Ferenc Reinhardt, Esmee Hoefsmit, Bimarzhan Assatova, Julia Casado, Marie-Charlotte Meinsohn, M Inmaculada Barrasa, George W Bell, Fernando Pérez-Villatoro, Kaisa Huhtinen, Johanna Hynninen, Jaana Oikkonen, Pamoda M Galhenage, Shailja Pathania, Paula T Hammond, Benjamin G Neel, Anniina Farkkila, David Pépin, Robert A Weinberg
Genetically Defined Syngeneic Mouse Models of Ovarian Cancer as Tools for the Discovery of Combination Immunotherapy. Cancer discovery 11 (2) (2020)
Anniina Farkkila, Doga C Gulhan, Julia Casado, Connor A Jacobson, Huy Nguyen, Bose Kochupurakkal, Zoltan Maliga, Clarence Yapp, Yu-An Chen, Denis Schapiro, Yinghui Zhou, Julie R Graham, Bruce J Dezube, Pamela N Munster, Sandro Santagata, Elizabeth Garcia, Scott Rodig, Ana Lako, Dipanjan Chowdhury, Geoffrey I Shapiro, Ursula A Matulonis, Peter J Park, Sampsa Hautaniemi, Peter Karl Sorger, Elizabeth M Swisher, Alan D' Andrea, Panagiotis A Konstantinopoulos
Immunogenomic profiling determines responses to combined PARP and PD-1 inhibition in ovarian cancer. Nature communications 11 (1) (2020)
Kalindi Parmar, Bose S Kochupurakkal, Jean-Bernard Lazaro, Zhigang C Wang, Sangeetha Palakurthi, Paul T Kirschmeier, Chunyu Yang, Larissa A Sambel, Anniina Farkkila, Elizaveta Reznichenko, Hunter D Reavis, Connor E Dunn, Lee Zou, Khanh T Do, Panagiotis A Konstantinopoulos, Ursula A Matulonis, Joyce F Liu, Alan D D'Andrea, Geoffrey I Shapiro
The CHK1 Inhibitor Prexasertib Exhibits Monotherapy Activity in High-Grade Serous Ovarian Cancer Models and Sensitizes to PARP Inhibition. Clinical cancer research : an official journal of the American Association for Cancer Research 25 (20) (2019)