Antonio J Giraldez (Antonio J Giráldez)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2018-2023
Publications (10 Years): 18

Top Topics

Long Noncoding Rna

Polycystic Kidney Disease

Gene Expression

Top Venues

Nature communications

Nature biotechnology

This page only lists publications with an associated author ORCID identifier.

Publications

Valerie A Tornini, Liyun Miao, Ho-Joon Lee, Timothy Gerson, Sarah E Dube, Valeria Schmidt, François Kroll, Yin Tang, Katherine Du, Manik Kuchroo, Charles E Vejnar, Ariel Alejandro Bazzini, Smita Krishnaswamy, Jason Rihel, Antonio J Giraldez
linc-mipep and linc-wrb encode micropeptides that regulate chromatin accessibility in vertebrate-specific neural cells. eLife 12 (2023)
Valerie A Tornini, Liyun Miao, Ho-Joon Lee, Timothy Gerson, Sarah E Dube, Valeria Schmidt, François Kroll, Yin Tang, Katherine Du, Manik Kuchroo, Charles E Vejnar, Ariel Alejandro Bazzini, Smita Krishnaswamy, Jason Rihel, Antonio J Giraldez
linc-mipep and linc-wrb encode micropeptides that regulate chromatin accessibility in vertebrate-specific neural cells. eLife 12 (2023)
Mark E Pownall, Liyun Miao, Charles E Vejnar, Ons M'Saad, Alice Sherrard, Megan A Frederick, Maria D J Benitez, Curtis W Boswell, Kenneth S Zaret, Joerg Bewersdorf, Antonio J Giraldez
Chromatin expansion microscopy reveals nanoscale organization of transcription and chromatin. Science (New York, N.Y.) 381 (6653) (2023)
Valerie A Tornini, Liyun Miao, Ho-Joon Lee, Timothy Gerson, Sarah E Dube, Valeria Schmidt, François Kroll, Yin Tang, Katherine Du, Manik Kuchroo, Charles E Vejnar, Ariel Alejandro Bazzini, Smita Krishnaswamy, Jason Rihel, Antonio J Giraldez
linc-mipep and linc-wrb encode micropeptides that regulate chromatin accessibility in vertebrate-specific neural cells. eLife 12 (2023)
Valerie A Tornini, Liyun Miao, Ho-Joon Lee, Timothy Gerson, Sarah E Dube, Valeria Schmidt, François Kroll, Yin Tang, Katherine Du, Manik Kuchroo, Charles E Vejnar, Ariel Alejandro Bazzini, Smita Krishnaswamy, Jason Rihel, Antonio J Giraldez
linc-mipep and linc-wrb encode micropeptides that regulate chromatin accessibility in vertebrate-specific neural cells. eLife 12 (2023)
Oguzhan Begik, Gregor Diensthuber, Huanle Liu, Anna Delgado-Tejedor, Cassandra Kontur, Adnan Muhammad Niazi, Eivind Valen, Antonio J Giraldez, Jean-Denis Beaudoin, John S Mattick, Eva Maria Novoa
Nano3P-seq: transcriptome-wide analysis of gene expression and tail dynamics using end-capture nanopore cDNA sequencing. Nature methods 20 (1) (2022)
Oguzhan Begik, Gregor Diensthuber, Huanle Liu, Anna Delgado-Tejedor, Cassandra Kontur, Adnan Muhammad Niazi, Eivind Valen, Antonio J Giraldez, Jean-Denis Beaudoin, John S Mattick, Eva Maria Novoa
Nano3P-seq: transcriptome-wide analysis of gene expression and tail dynamics using end-capture nanopore cDNA sequencing. Nature methods 20 (1) (2022)
Oguzhan Begik, Gregor Diensthuber, Huanle Liu, Anna Delgado-Tejedor, Cassandra Kontur, Adnan Muhammad Niazi, Eivind Valen, Antonio J Giraldez, Jean-Denis Beaudoin, John S Mattick, Eva Maria Novoa
Nano3P-seq: transcriptome-wide analysis of gene expression and tail dynamics using end-capture nanopore cDNA sequencing. Nature methods 20 (1) (2022)
Oguzhan Begik, Gregor Diensthuber, Huanle Liu, Anna Delgado-Tejedor, Cassandra Kontur, Adnan Muhammad Niazi, Eivind Valen, Antonio J Giraldez, Jean-Denis Beaudoin, John S Mattick, Eva Maria Novoa
Nano3P-seq: transcriptome-wide analysis of gene expression and tail dynamics using end-capture nanopore cDNA sequencing. Nature methods 20 (1) (2022)
Oguzhan Begik, Gregor Diensthuber, Huanle Liu, Anna Delgado-Tejedor, Cassandra Kontur, Adnan Muhammad Niazi, Eivind Valen, Antonio J Giraldez, Jean-Denis Beaudoin, John S Mattick, Eva Maria Novoa
Nano3P-seq: transcriptome-wide analysis of gene expression and tail dynamics using end-capture nanopore cDNA sequencing. Nature methods 20 (1) (2022)
Oguzhan Begik, Gregor Diensthuber, Huanle Liu, Anna Delgado-Tejedor, Cassandra Kontur, Adnan Muhammad Niazi, Eivind Valen, Antonio J Giraldez, Jean-Denis Beaudoin, John S Mattick, Eva Maria Novoa
Nano3P-seq: transcriptome-wide analysis of gene expression and tail dynamics using end-capture nanopore cDNA sequencing. Nature methods (2022)
Jeremy Vicencio, Carlos Sánchez-Bolaños, Ismael Moreno-Sánchez, David Brena, Charles E Vejnar, Dmytro Kukhtar, Miguel Ruiz-López, Mariona Cots-Ponjoan, Alejandro Rubio, Natalia Rodrigo Melero, Jesús Crespo-Cuadrado, Carlo Carolis, Antonio J Pérez-Pulido, Antonio J Giraldez, Benjamin P Kleinstiver, Julián Cerón, Miguel A Moreno-Mateos
Genome editing in animals with minimal PAM CRISPR-Cas9 enzymes. Nature communications 13 (1) (2022)
Oguzhan Begik, Gregor Diensthuber, Huanle Liu, Anna Delgado-Tejedor, Cassandra Kontur, Adnan Muhammad Niazi, Eivind Valen, Antonio J Giraldez, Jean-Denis Beaudoin, John S Mattick, Eva Maria Novoa
Nano3P-seq: transcriptome-wide analysis of gene expression and tail dynamics using end-capture nanopore cDNA sequencing. Nature methods 20 (1) (2022)
Saurabh J Pradhan, Puli Chandramouli Reddy, Michael Smutny, Ankita Sharma, Keisuke Sako, Meghana S Oak, Rini Shah, Mrinmoy Pal, Ojas Deshpande, Greg Dsilva, Yin Tang, Rakesh Kumar Mishra, Girish Deshpande, Antonio J Giraldez, Mahendra Sonawane, Carl-Philipp Heisenberg, Sanjeev Galande
Satb2 acts as a gatekeeper for major developmental transitions during early vertebrate embryogenesis. Nature communications 12 (1) (2021)
Daniel B Burkhardt, Jay S Stanley, Alexander Tong, Ana Luisa Perdigoto, Scott A Gigante, Kevan C Herold, Guy Wolf, Antonio J Giraldez, David van Dijk, Smita Krishnaswamy
Quantifying the effect of experimental perturbations at single-cell resolution. Nature biotechnology 39 (5) (2021)
Markus Maerker, Maike Getwan, Megan E Dowdle, Jason C McSheene, Vanessa Gonzalez, José L Pelliccia, Danielle S Hamilton, Valeria Yartseva, Charles E Vejnar, Melanie Tingler, Katsura Minegishi, Philipp Vick, Antonio J Giraldez, Hiroshi Hamada, Rebecca D Burdine, Michael D Sheets, Martin Blum, Axel Schweickert
Bicc1 and Dicer regulate left-right patterning through post-transcriptional control of the Nodal inhibitor Dand5. Nature communications 12 (1) (2021)
Jean-Denis Beaudoin, Eva Maria Novoa, Charles E Vejnar, Valeria Yartseva, Carter M Takacs, Manolis Kellis, Antonio J Giraldez
Analyses of mRNA structure dynamics identify embryonic gene regulatory programs. Nature structural & molecular biology 25 (8) (2018)
Juan Pablo Fernandez, Miguel Angel Moreno-Mateos, Andre Gohr, Liyun Miao, Shun Hang Chan, Manuel Irimia, Antonio J Giraldez
RES complex is associated with intron definition and required for zebrafish early embryogenesis. PLoS genetics 14 (7) (2018)