Assaf Vardi (A Vardi, Adi Volpert)

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 45

Top Topics

Oxidative Stress

Arabidopsis Thaliana

Top Venues

Nature microbiology

Nature communications

Proceedings of the National Academy of Sciences of the United States of America

This page only lists publications with an associated author ORCID identifier.

Publications

Amir Fromm, Gur Hevroni, Flora Vincent, Daniella Schatz, Carolina A Martinez-Gutierrez, Frank O'Neill Aylward, Assaf Vardi
Single-cell RNA-seq of the rare virosphere reveals the native hosts of giant viruses in the marine environment. Nature microbiology 9 (6) (2024)
Amir Fromm, Gur Hevroni, Flora Vincent, Daniella Schatz, Carolina A Martinez-Gutierrez, Frank O'Neill Aylward, Assaf Vardi
Single-cell RNA-seq of the rare virosphere reveals the native hosts of giant viruses in the marine environment. Nature microbiology 9 (6) (2024)
Amir Fromm, Gur Hevroni, Flora Vincent, Daniella Schatz, Carolina A Martinez-Gutierrez, Frank O'Neill Aylward, Assaf Vardi
Single-cell RNA-seq of the rare virosphere reveals the native hosts of giant viruses in the marine environment. Nature microbiology (2024)
Amir Fromm, Gur Hevroni, Flora Vincent, Daniella Schatz, Carolina A Martinez-Gutierrez, Frank O'Neill Aylward, Assaf Vardi
Single-cell RNA-seq of the rare virosphere reveals the native hosts of giant viruses in the marine environment. Nature microbiology (2024)
Amir Fromm, Gur Hevroni, Flora Vincent, Daniella Schatz, Carolina A Martinez-Gutierrez, Frank O'Neill Aylward, Assaf Vardi
Single-cell RNA-seq of the rare virosphere reveals the native hosts of giant viruses in the marine environment. Nature microbiology 9 (6) (2024)
Flora Vincent, Matti Gralka, Guy Schleyer, Daniella Schatz, Miguel Cabrera-Brufau, Constanze Kuhlisch, Andreas Sichert, Silvia Vidal-Melgosa, Kyle M J Mayers, Noa Barak-Gavish, J Michel Flores, Marta Masdeu-Navarro, Jorun Karin Egge, Aud Larsen, Jan-Hendrik Hehemann, Celia Marrasé, Rafel Simó, Otto X Cordero, Assaf Vardi
Viral infection switches the balance between bacterial and eukaryotic recyclers of organic matter during coccolithophore blooms. Nature communications 14 (1) (2023)
Flora Vincent, Assaf Vardi
Viral infection in the ocean-A journey across scales. PLoS biology 21 (1) (2023)
Constanze Kuhlisch, Adva Shemi, Noa Barak-Gavish, Daniella Schatz, Assaf Vardi
Algal blooms in the ocean: hot spots for chemically mediated microbial interactions. Nature reviews. Microbiology (2023)
Noa Barak-Gavish, Bareket Dassa, Constanze Kuhlisch, Inbal Nussbaum, Alexander Brandis, Gili Rosenberg, Roi Avraham, Assaf Vardi
Bacterial lifestyle switch in response to algal metabolites. eLife 12 (2023)
Flora Vincent, Assaf Vardi
Viral infection in the ocean-A journey across scales. PLoS biology 21 (1) (2023)
Flora Vincent, Matti Gralka, Guy Schleyer, Daniella Schatz, Miguel Cabrera-Brufau, Constanze Kuhlisch, Andreas Sichert, Silvia Vidal-Melgosa, Kyle M J Mayers, Noa Barak-Gavish, J Michel Flores, Marta Masdeu-Navarro, Jorun Karin Egge, Aud Larsen, Jan-Hendrik Hehemann, Celia Marrasé, Rafel Simó, Otto X Cordero, Assaf Vardi
Viral infection switches the balance between bacterial and eukaryotic recyclers of organic matter during coccolithophore blooms. Nature communications 14 (1) (2023)
Adva Shemi, Shifra Ben-Dor, Ron Rotkopf, Orly Dym, Assaf Vardi
Phylogeny and biogeography of the algal DMS-releasing enzyme in the global ocean. ISME communications 3 (1) (2023)
Amir Fromm, Gur Hevroni, Flora Vincent, Daniella Schatz, Carolina A Martinez-Gutierrez, Frank O'Neill Aylward, Assaf Vardi
Homing in on the rare virosphere reveals the native host of giant viruses. bioRxiv : the preprint server for biology (2023)
Fabien Lombard, Guillaume Bourdin, Stéphane Pesant, Sylvain Agostini, Alberto Baudena, Emilie Boissin, Nicolas Cassar, Megan Clampitt, Pascal Conan, Ophélie Da Silva, Céline Dimier, Eric Douville, Amanda Elineau, Jonathan Fin, J Michel Flores, Jean François Ghiglione, Benjamin C C Hume, Laetitia Jalabert, Seth G John, Rachel L Kelly, Ilan Koren, Yajuan Lin, Dominique Marie, Ryan McMinds, Zoé Mériguet, Nicolas Metzl, David A Paz García, Maria Luiza Pedrotti, Julie Poulain, Mireille Pujo-Pay, Joséphine Ras, Gilles Reverdin, Sarah Romac, Alice Rouan, Eric Röttinger, Assaf Vardi, Christian R Voolstra, Clémentine Moulin, Guillaume Iwankow, Bernard Banaigs, Chris Bowler, Colomban de Vargas, Didier Forcioli, Paola Furla, Pierre E Galand, Eric Gilson, Stéphanie Reynaud, Shinichi Sunagawa, Matthew B Sullivan, Olivier P Thomas, Romain Troublé, Rebecca Vega Thurber, Patrick Wincker, Didier Zoccola, Denis Allemand, Serge Planes, Emmanuel S Boss, Gaby Gorsky
Open science resources from the Tara Pacific expedition across coral reef and surface ocean ecosystems. Scientific data 10 (1) (2023)
Estelle E Clerc, Jean-Baptiste Raina, Johannes M Keegstra, Zachary Landry, Sammy Pontrelli, Uria Alcolombri, Bennett S Lambert, Valerio Anelli, Flora Vincent, Marta Masdeu-Navarro, Andreas Sichert, Frédéric De Schaetzen, Uwe Sauer, Rafel Simó, Jan-Hendrik Hehemann, Assaf Vardi, Justin R Seymour, Roman Stocker
Strong chemotaxis by marine bacteria towards polysaccharides is enhanced by the abundant organosulfur compound DMSP. Nature communications 14 (1) (2023)
Guy Schleyer, Constanze Kuhlisch, Carmit Ziv, Shifra Ben-Dor, Sergey Malitsky, Daniella Schatz, Assaf Vardi
Lipid biomarkers for algal resistance to viral infection in the ocean. Proceedings of the National Academy of Sciences of the United States of America 120 (27) (2023)
Flora Vincent, Matti Gralka, Guy Schleyer, Daniella Schatz, Miguel Cabrera-Brufau, Constanze Kuhlisch, Andreas Sichert, Silvia Vidal-Melgosa, Kyle M J Mayers, Noa Barak-Gavish, J Michel Flores, Marta Masdeu-Navarro, Jorun Karin Egge, Aud Larsen, Jan-Hendrik Hehemann, Celia Marrasé, Rafel Simó, Otto X Cordero, Assaf Vardi
Viral infection switches the balance between bacterial and eukaryotic recyclers of organic matter during coccolithophore blooms. Nature communications 14 (1) (2023)
Flora Vincent, Matti Gralka, Guy Schleyer, Daniella Schatz, Miguel Cabrera-Brufau, Constanze Kuhlisch, Andreas Sichert, Silvia Vidal-Melgosa, Kyle M J Mayers, Noa Barak-Gavish, J Michel Flores, Marta Masdeu-Navarro, Jorun Karin Egge, Aud Larsen, Jan-Hendrik Hehemann, Celia Marrasé, Rafel Simó, Otto X Cordero, Assaf Vardi
Viral infection switches the balance between bacterial and eukaryotic recyclers of organic matter during coccolithophore blooms. Nature communications 14 (1) (2023)
Flora Vincent, Assaf Vardi
Viral infection in the ocean-A journey across scales. PLoS biology 21 (1) (2023)
Guy Schleyer, Constanze Kuhlisch, Carmit Ziv, Shifra Ben-Dor, Sergey Malitsky, Daniella Schatz, Assaf Vardi
Lipid biomarkers for algal resistance to viral infection in the ocean. Proceedings of the National Academy of Sciences of the United States of America 120 (27) (2023)
Flora Vincent, Assaf Vardi
Viral infection in the ocean-A journey across scales. PLoS biology 21 (1) (2023)
Gur Hevroni, Flora Vincent, Chuan Ku, Uri Sheyn, Assaf Vardi
Daily turnover of active giant virus infection during algal blooms revealed by single-cell transcriptomics. Science advances 9 (41) (2023)
Noa Barak-Gavish, Bareket Dassa, Constanze Kuhlisch, Inbal Nussbaum, Alexander Brandis, Gili Rosenberg, Roi Avraham, Assaf Vardi
Bacterial lifestyle switch in response to algal metabolites. eLife 12 (2023)
Guy Schleyer, Constanze Kuhlisch, Carmit Ziv, Shifra Ben-Dor, Sergey Malitsky, Daniella Schatz, Assaf Vardi
Lipid biomarkers for algal resistance to viral infection in the ocean. Proceedings of the National Academy of Sciences of the United States of America 120 (27) (2023)
Flora Vincent, Assaf Vardi
Viral infection in the ocean-A journey across scales. PLoS biology 21 (1) (2023)
Noa Barak-Gavish, Bareket Dassa, Constanze Kuhlisch, Inbal Nussbaum, Alexander Brandis, Gili Rosenberg, Roi Avraham, Assaf Vardi
Bacterial lifestyle switch in response to algal metabolites. eLife 12 (2023)
Mary Ann Moran, Elizabeth B Kujawinski, William F Schroer, Shady A Amin, Nicholas R Bates, Erin M Bertrand, Rogier Braakman, C Titus Brown, Markus W Covert, Scott C Doney, Sonya T Dyhrman, Arthur S Edison, A Murat Eren, Naomi M Levine, Liang Li, Avena Clara Ross, Mak A Saito, Alyson E Santoro, Daniel Segrè, Ashley Shade, Matthew B Sullivan, Assaf Vardi
Microbial metabolites in the marine carbon cycle. Nature microbiology 7 (4) (2022)
Amir Fromm, Daniella Schatz, Shifra Ben-Dor, Ester Feldmesser, Assaf Vardi
Complete Genome Sequence of Emiliania huxleyi Virus Strain M1, Isolated from an Induced E. huxleyi Bloom in Bergen, Norway. Microbiology resource announcements 11 (5) (2022)
Adva Shemi, Uria Alcolombri, Daniella Schatz, Viviana Farstey, Flora Vincent, Ron Rotkopf, Shifra Ben-Dor, Miguel José Frada, Dan S Tawfik, Assaf Vardi
Dimethyl sulfide mediates microbial predator-prey interactions between zooplankton and algae in the ocean. Nature microbiology 6 (11) (2021)
Constanze Kuhlisch, Guy Schleyer, Nir Shahaf, Flora Vincent, Daniella Schatz, Assaf Vardi
Viral infection of algal blooms leaves a unique metabolic footprint on the dissolved organic matter in the ocean. Science advances 7 (25) (2021)
J Michel Flores, Guillaume Bourdin, Alexander B Kostinski, Orit Altaratz, Guy Dagan, Fabien Lombard, Nils Haëntjens, Emmanuel S Boss, Matthew B Sullivan, Gabriel Gorsky, Naama Lang-Yona, Miri Trainic, Sarah Romac, Christian R Voolstra, Yinon Rudich, Assaf Vardi, Ilan Koren
Diel cycle of sea spray aerosol concentration. Nature communications 12 (1) (2021)
Flora Vincent, Uri Sheyn, Ziv Porat, Daniella Schatz, Assaf Vardi
Visualizing active viral infection reveals diverse cell fates in synchronized algal bloom demise. Proceedings of the National Academy of Sciences of the United States of America 118 (11) (2021)
Francesco Carrara, Anupam Sengupta, Lars Behrendt, Assaf Vardi, Roman Stocker
Bistability in oxidative stress response determines the migration behavior of phytoplankton in turbulence. Proceedings of the National Academy of Sciences of the United States of America 118 (5) (2021)
Daniella Schatz, Guy Schleyer, Marius R Saltvedt, Ruth-Anne Sandaa, Ester Feldmesser, Assaf Vardi
Ecological significance of extracellular vesicles in modulating host-virus interactions during algal blooms. The ISME journal 15 (12) (2021)
Assaf R Gavish, Orr H Shapiro, Esti Kramarsky-Winter, Assaf Vardi
Microscale tracking of coral-vibrio interactions. ISME communications 1 (1) (2021)
Chuan Ku, Uri Sheyn, Arnau Sebé-Pedrós, Shifra Ben-Dor, Daniella Schatz, Amos Tanay, Shilo Rosenwasser, Assaf Vardi
A single-cell view on alga-virus interactions reveals sequential transcriptional programs and infection states. Science advances 6 (21) (2020)
Guy Schleyer, Nir Shahaf, Carmit Ziv, Yonghui Dong, Roy A Meoded, Eric J N Helfrich, Daniella Schatz, Shilo Rosenwasser, Ilana Rogachev, Asaph Aharoni, Jörn Piel, Assaf Vardi
In plaque-mass spectrometry imaging of a bloom-forming alga during viral infection reveals a metabolic shift towards odd-chain fatty acid lipids. Nature microbiology 4 (3) (2019)
Shilo Rosenwasser, Uri Sheyn, Miguel J Frada, David Pilzer, Ron Rotkopf, Assaf Vardi
Unmasking cellular response of a bloom-forming alga to viral infection by resolving expression profiles at a single-cell level. PLoS pathogens 15 (4) (2019)
Avia Mizrachi, Shiri Graff van Creveld, Orr H Shapiro, Shilo Rosenwasser, Assaf Vardi
Light-dependent single-cell heterogeneity in the chloroplast redox state regulates cell fate in a marine diatom. eLife 8 (2019)
Uri Sheyn, Shilo Rosenwasser, Yoav Lehahn, Noa Barak-Gavish, Ron Rotkopf, Kay D Bidle, Ilan Koren, Daniella Schatz, Assaf Vardi
Expression profiling of host and virus during a coccolithophore bloom provides insights into the role of viral infection in promoting carbon export. The ISME journal 12 (3) (2018)
Assaf Vardi, Shiri Graff van Creveld, Shilo Rosenwasser, Assaf Vardi
Diurnal fluctuations in chloroplast GSH redox state regulate susceptibility to oxidative stress and cell fate in a bloom-forming diatom. Journal of phycology 54 (3) (2018)
Chuan Ku, Noa Barak-Gavish, Mark Maienschein-Cline, Stefan J Green, Assaf Vardi
Complete Genome Sequence of Sulfitobacter sp. Strain D7, a Virulent Bacterium Isolated from an Emiliania huxleyi Algal Bloom in the North Atlantic. Microbiology resource announcements 7 (19) (2018)
E Gibbin, A Gavish, Thomas Krueger, E Kramarsky-Winter, Orr H Shapiro, Romain Guiet, L Jensen, Assaf Vardi, A Meibom
Vibrio coralliilyticus infection triggers a behavioural response and perturbs nutritional exchange and tissue integrity in a symbiotic coral. The ISME journal 13 (4) (2018)
Christien P Laber, Jonathan E Hunter, Filipa Carvalho, James R Collins, Elias J Hunter, Brittany M Schieler, Emmanuel Boss, Kuldeep More, Miguel Frada, Kimberlee Thamatrakoln, Christopher M Brown, Liti Haramaty, Justin Ossolinski, Helen Fredricks, Jozef I Nissimov, Rebecca Vandzura, Uri Sheyn, Yoav Lehahn, Robert J Chant, Ana M Martins, Marco J L Coolen, Assaf Vardi, Giacomo R DiTullio, Benjamin A S Van Mooy, Kay D Bidle
Coccolithovirus facilitation of carbon export in the North Atlantic. Nature microbiology 3 (5) (2018)
Daniella Schatz, Shilo Rosenwasser, Sergey Malitsky, Sharon Grayer Wolf, Ester Feldmesser, Assaf Vardi
Communication via extracellular vesicles enhances viral infection of a cosmopolitan alga. Nature microbiology 2 (11) (2017)