Benjamin D Humphreys

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 73

Top Topics

Long Noncoding Rna

Polycystic Kidney Disease

Top Venues

Nature communications

Proceedings of the National Academy of Sciences of the United States of America

bioRxiv : the preprint server for biology

Journal of the American Society of Nephrology : JASN

This page only lists publications with an associated author ORCID identifier.

Publications

Yoshiharu Muto, Yasuhiro Yoshimura, Haojia Wu, Monica Chang-Panesso, Nicolas Ledru, Owen M Woodward, Patricia Outeda, Tao Cheng, Moe R Mahjoub, Terry J Watnick, Benjamin D Humphreys
Multi-omics profiling of mouse polycystic kidney disease progression at a single cell resolution. bioRxiv : the preprint server for biology (2024)
Haikuo Li, Dian Li, Benjamin D Humphreys
Chromatin conformation and histone modification profiling across human kidney anatomic regions. Scientific data 11 (1) (2024)
Haikuo Li, Dian Li, Benjamin D Humphreys
Chromatin conformation and histone modification profiling across human kidney anatomic regions. Scientific data 11 (1) (2024)
Shayna T J Bradford, Haojia Wu, Yuhei Kirita, Changfeng Chen, Nicole P Malvin, Yasuhiro Yoshimura, Yoshiharu Muto, Benjamin D Humphreys
TNIK depletion induces inflammation and apoptosis in injured renal proximal tubule epithelial cells. American journal of physiology. Renal physiology 326 (5) (2024)
Nicolas Ledru, Parker C Wilson, Yoshiharu Muto, Yasuhiro Yoshimura, Haojia Wu, Dian Li, Amish Asthana, Stefan G Tullius, Sushrut S Waikar, Giuseppe Orlando, Benjamin D Humphreys
Predicting proximal tubule failed repair drivers through regularized regression analysis of single cell multiomic sequencing. Nature communications 15 (1) (2024)
Nicolas Ledru, Parker C Wilson, Yoshiharu Muto, Yasuhiro Yoshimura, Haojia Wu, Dian Li, Amish Asthana, Stefan G Tullius, Sushrut S Waikar, Giuseppe Orlando, Benjamin D Humphreys
Predicting proximal tubule failed repair drivers through regularized regression analysis of single cell multiomic sequencing. Nature communications 15 (1) (2024)
Haikuo Li, Dian Li, Benjamin D Humphreys
Chromatin conformation and histone modification profiling across human kidney anatomic regions. Scientific data 11 (1) (2024)
Haojia Wu, Eryn E Dixon, Qiao Xuanyuan, Juanru Guo, Yasuhiro Yoshimura, Chitnis Debashish, Anezka Niesnerova, Hao Xu, Morgane Rouault, Benjamin D Humphreys
High resolution spatial profiling of kidney injury and repair using RNA hybridization-based in situ sequencing. Nature communications 15 (1) (2024)
Yoshiharu Muto, Yasuhiro Yoshimura, Haojia Wu, Monica Chang-Panesso, Nicolas Ledru, Owen M Woodward, Patricia Outeda, Tao Cheng, Moe R Mahjoub, Terry J Watnick, Benjamin D Humphreys
Multi-omics profiling of mouse polycystic kidney disease progression at a single cell resolution. bioRxiv : the preprint server for biology (2024)
Yoshiharu Muto, Eryn E Dixon, Yasuhiro Yoshimura, Nicolas Ledru, Yuhei Kirita, Haojia Wu, Benjamin D Humphreys
Epigenetic reprogramming driving successful and failed repair in acute kidney injury. bioRxiv : the preprint server for biology (2024)
Nicolas Ledru, Parker C Wilson, Yoshiharu Muto, Yasuhiro Yoshimura, Haojia Wu, Dian Li, Amish Asthana, Stefan G Tullius, Sushrut S Waikar, Giuseppe Orlando, Benjamin D Humphreys
Predicting proximal tubule failed repair drivers through regularized regression analysis of single cell multiomic sequencing. Nature communications 15 (1) (2024)
Haojia Wu, Eryn E Dixon, Qiao Xuanyuan, Juanru Guo, Yasuhiro Yoshimura, Chitnis Debashish, Anezka Niesnerova, Hao Xu, Morgane Rouault, Benjamin D Humphreys
High resolution spatial profiling of kidney injury and repair using RNA hybridization-based in situ sequencing. Nature communications 15 (1) (2024)
Haojia Wu, Eryn E Dixon, Qiao Xuanyuan, Juanru Guo, Yasuhiro Yoshimura, Chitnis Debashish, Anezka Niesnerova, Hao Xu, Morgane Rouault, Benjamin D Humphreys
High resolution spatial profiling of kidney injury and repair using RNA hybridization-based in situ sequencing. Nature communications 15 (1) (2024)
Yoshiharu Muto, Eryn E Dixon, Yasuhiro Yoshimura, Nicolas Ledru, Yuhei Kirita, Haojia Wu, Benjamin D Humphreys
Epigenetic reprogramming driving successful and failed repair in acute kidney injury. Science advances 10 (32) (2024)
Yoshiharu Muto, Eryn E Dixon, Yasuhiro Yoshimura, Nicolas Ledru, Yuhei Kirita, Haojia Wu, Benjamin D Humphreys
Epigenetic reprogramming driving successful and failed repair in acute kidney injury. bioRxiv : the preprint server for biology (2024)
Yoshiharu Muto, Eryn E Dixon, Yasuhiro Yoshimura, Nicolas Ledru, Yuhei Kirita, Haojia Wu, Benjamin D Humphreys
Epigenetic reprogramming driving successful and failed repair in acute kidney injury. Science advances 10 (32) (2024)
Nicolas Ledru, Parker C Wilson, Yoshiharu Muto, Yasuhiro Yoshimura, Haojia Wu, Dian Li, Amish Asthana, Stefan G Tullius, Sushrut S Waikar, Giuseppe Orlando, Benjamin D Humphreys
Predicting proximal tubule failed repair drivers through regularized regression analysis of single cell multiomic sequencing. Nature communications 15 (1) (2024)
Haikuo Li, Dian Li, Benjamin D Humphreys
Chromatin conformation and histone modification profiling across human kidney anatomic regions. Scientific data 11 (1) (2024)
Yoshiharu Muto, Eryn E Dixon, Yasuhiro Yoshimura, Nicolas Ledru, Yuhei Kirita, Haojia Wu, Benjamin D Humphreys
Epigenetic reprogramming driving successful and failed repair in acute kidney injury. bioRxiv : the preprint server for biology (2024)
Nicolas Ledru, Parker C Wilson, Yoshiharu Muto, Yasuhiro Yoshimura, Haojia Wu, Dian Li, Amish Asthana, Stefan G Tullius, Sushrut S Waikar, Giuseppe Orlando, Benjamin D Humphreys
Predicting proximal tubule failed repair drivers through regularized regression analysis of single cell multiomic sequencing. Nature communications 15 (1) (2024)
Yoshiharu Muto, Yasuhiro Yoshimura, Haojia Wu, Monica Chang-Panesso, Nicolas Ledru, Owen M Woodward, Patricia Outeda, Tao Cheng, Moe R Mahjoub, Terry J Watnick, Benjamin D Humphreys
Multi-omics profiling of mouse polycystic kidney disease progression at a single cell resolution. bioRxiv : the preprint server for biology (2024)
Yoshiharu Muto, Yasuhiro Yoshimura, Haojia Wu, Monica Chang-Panesso, Nicolas Ledru, Owen M Woodward, Patricia Outeda, Tao Cheng, Moe R Mahjoub, Terry J Watnick, Benjamin D Humphreys
Multi-omics profiling of mouse polycystic kidney disease progression at a single cell resolution. bioRxiv : the preprint server for biology (2024)
Qiao Xuanyuan, Haojia Wu, Benjamin D Humphreys
Emerging high resolution spatial transcriptomic technologies in kidney research. Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association (2024)
Yoshiharu Muto, Eryn E Dixon, Yasuhiro Yoshimura, Nicolas Ledru, Yuhei Kirita, Haojia Wu, Benjamin D Humphreys
Epigenetic reprogramming driving successful and failed repair in acute kidney injury. Science advances 10 (32) (2024)
Nicolas Ledru, Parker C Wilson, Yoshiharu Muto, Yasuhiro Yoshimura, Haojia Wu, Dian Li, Amish Asthana, Stefan G Tullius, Sushrut S Waikar, Giuseppe Orlando, Benjamin D Humphreys
Predicting proximal tubule failed repair drivers through regularized regression analysis of single cell multiomic sequencing. Nature communications 15 (1) (2024)
Haojia Wu, Eryn E Dixon, Qiao Xuanyuan, Juanru Guo, Yasuhiro Yoshimura, Chitnis Debashish, Anezka Niesnerova, Hao Xu, Morgane Rouault, Benjamin D Humphreys
High resolution spatial profiling of kidney injury and repair using RNA hybridization-based in situ sequencing. Nature communications 15 (1) (2024)
Yige Wu, Nadezhda V Terekhanova, Wagma Caravan, Nataly Naser Al Deen, Preet Lal, Siqi Chen, Chia-Kuei Mo, Song Cao, Yize Li, Alla Karpova, Ruiyang Liu, Yanyan Zhao, Andrew Shinkle, Ilya Strunilin, Cody Weimholt, Kazuhito Sato, Lijun Yao, Mamatha Serasanambati, Xiaolu Yang, Matthew A Wyczalkowski, Houxiang Zhu, Daniel Cui Zhou, Reyka G Jayasinghe, Daniel Mendez, Michael C Wendl, David Clark, Chelsea Newton, Yijun Ruan, Melissa A Reimers, Russell K Pachynski, Chris Kinsinger, Scott D Jewell, Daniel W Chan, Hui Zhang, Aadel A Chaudhuri, Milan G Chheda, Benjamin D Humphreys, Mehdi Mesri, Henry Rodriguez, James J Hsieh, Li Ding, Feng Chen
Epigenetic and transcriptomic characterization reveals progression markers and essential pathways in clear cell renal cell carcinoma. Nature communications 14 (1) (2023)
Benjamin D Humphreys
Close Encounters of the Tertiary Kind: Intercellular Inflammatory Communication Long after AKI. Journal of the American Society of Nephrology : JASN 34 (10) (2023)
Yasuhiro Yoshimura, Yoshiharu Muto, Nicolas Ledru, Haojia Wu, Kohei Omachi, Jeffery H Miner, Benjamin D Humphreys
A single-cell multiomic analysis of kidney organoid differentiation. Proceedings of the National Academy of Sciences of the United States of America 120 (20) (2023)
Yasuhiro Yoshimura, Yoshiharu Muto, Nicolas Ledru, Haojia Wu, Kohei Omachi, Jeffery H Miner, Benjamin D Humphreys
A single-cell multiomic analysis of kidney organoid differentiation. Proceedings of the National Academy of Sciences of the United States of America 120 (20) (2023)
Yige Wu, Nadezhda V Terekhanova, Wagma Caravan, Nataly Naser Al Deen, Preet Lal, Siqi Chen, Chia-Kuei Mo, Song Cao, Yize Li, Alla Karpova, Ruiyang Liu, Yanyan Zhao, Andrew Shinkle, Ilya Strunilin, Cody Weimholt, Kazuhito Sato, Lijun Yao, Mamatha Serasanambati, Xiaolu Yang, Matthew A Wyczalkowski, Houxiang Zhu, Daniel Cui Zhou, Reyka G Jayasinghe, Daniel Mendez, Michael C Wendl, David Clark, Chelsea Newton, Yijun Ruan, Melissa A Reimers, Russell K Pachynski, Chris Kinsinger, Scott D Jewell, Daniel W Chan, Hui Zhang, Aadel A Chaudhuri, Milan G Chheda, Benjamin D Humphreys, Mehdi Mesri, Henry Rodriguez, James J Hsieh, Li Ding, Feng Chen
Epigenetic and transcriptomic characterization reveals progression markers and essential pathways in clear cell renal cell carcinoma. Nature communications 14 (1) (2023)
Yasuhiro Yoshimura, Yoshiharu Muto, Nicolas Ledru, Haojia Wu, Kohei Omachi, Jeffery H Miner, Benjamin D Humphreys
A single-cell multiomic analysis of kidney organoid differentiation. Proceedings of the National Academy of Sciences of the United States of America 120 (20) (2023)
Yasuhiro Yoshimura, Yoshiharu Muto, Nicolas Ledru, Haojia Wu, Kohei Omachi, Jeffery H Miner, Benjamin D Humphreys
A single-cell multiomic analysis of kidney organoid differentiation. Proceedings of the National Academy of Sciences of the United States of America 120 (20) (2023)
Yige Wu, Nadezhda V Terekhanova, Wagma Caravan, Nataly Naser Al Deen, Preet Lal, Siqi Chen, Chia-Kuei Mo, Song Cao, Yize Li, Alla Karpova, Ruiyang Liu, Yanyan Zhao, Andrew Shinkle, Ilya Strunilin, Cody Weimholt, Kazuhito Sato, Lijun Yao, Mamatha Serasanambati, Xiaolu Yang, Matthew A Wyczalkowski, Houxiang Zhu, Daniel Cui Zhou, Reyka G Jayasinghe, Daniel Mendez, Michael C Wendl, David Clark, Chelsea Newton, Yijun Ruan, Melissa A Reimers, Russell K Pachynski, Chris Kinsinger, Scott D Jewell, Daniel W Chan, Hui Zhang, Aadel A Chaudhuri, Milan G Chheda, Benjamin D Humphreys, Mehdi Mesri, Henry Rodriguez, James J Hsieh, Li Ding, Feng Chen
Epigenetic and transcriptomic characterization reveals progression markers and essential pathways in clear cell renal cell carcinoma. Nature communications 14 (1) (2023)
Yasuhiro Yoshimura, Yoshiharu Muto, Kohei Omachi, Jeffery H Miner, Benjamin D Humphreys
Elucidating the Proximal Tubule HNF4A Gene Regulatory Network in Human Kidney Organoids. Journal of the American Society of Nephrology : JASN (2023)
Yige Wu, Nadezhda V Terekhanova, Wagma Caravan, Nataly Naser Al Deen, Preet Lal, Siqi Chen, Chia-Kuei Mo, Song Cao, Yize Li, Alla Karpova, Ruiyang Liu, Yanyan Zhao, Andrew Shinkle, Ilya Strunilin, Cody Weimholt, Kazuhito Sato, Lijun Yao, Mamatha Serasanambati, Xiaolu Yang, Matthew A Wyczalkowski, Houxiang Zhu, Daniel Cui Zhou, Reyka G Jayasinghe, Daniel Mendez, Michael C Wendl, David Clark, Chelsea Newton, Yijun Ruan, Melissa A Reimers, Russell K Pachynski, Chris Kinsinger, Scott D Jewell, Daniel W Chan, Hui Zhang, Aadel A Chaudhuri, Milan G Chheda, Benjamin D Humphreys, Mehdi Mesri, Henry Rodriguez, James J Hsieh, Li Ding, Feng Chen
Author Correction: Epigenetic and transcriptomic characterization reveals progression markers and essential pathways in clear cell renal cell carcinoma. Nature communications 14 (1) (2023)
Joseph C Maggiore, Ryan LeGraw, Aneta J Przepiorski, Jeremy Velazquez, Christopher Chaney, Evan Streeter, Anne C S Barbosa, Jonathan M Franks, Joshua Hislop, Alex Hill, Haojia Wu, Katherine E Pfister, Sara E Howden, Simon C Watkins, Melissa H Little, Benjamin D Humphreys, Alan M Watson, Donna Beer Stolz, Samira Kiani, Alan J Davidson, Thomas J Carroll, Ondine Cleaver, Sunder Sims-Lucas, Mo R Ebrahimkhani, Neil A Hukriede
Genetically engineering endothelial niche in human kidney organoids enables multilineage maturation, vascularization and de novo cell types. bioRxiv : the preprint server for biology (2023)
Benjamin D Humphreys
Caught in the crossfire: cancer, cisplatin therapy, and kidney injury. American journal of physiology. Renal physiology 324 (4) (2023)
Benjamin D Humphreys
Caught in the crossfire: cancer, cisplatin therapy, and kidney injury. American journal of physiology. Renal physiology 324 (4) (2023)
Yige Wu, Nadezhda V Terekhanova, Wagma Caravan, Nataly Naser Al Deen, Preet Lal, Siqi Chen, Chia-Kuei Mo, Song Cao, Yize Li, Alla Karpova, Ruiyang Liu, Yanyan Zhao, Andrew Shinkle, Ilya Strunilin, Cody Weimholt, Kazuhito Sato, Lijun Yao, Mamatha Serasanambati, Xiaolu Yang, Matthew A Wyczalkowski, Houxiang Zhu, Daniel Cui Zhou, Reyka G Jayasinghe, Daniel Mendez, Michael C Wendl, David Clark, Chelsea Newton, Yijun Ruan, Melissa A Reimers, Russell K Pachynski, Chris Kinsinger, Scott D Jewell, Daniel W Chan, Hui Zhang, Aadel A Chaudhuri, Milan G Chheda, Benjamin D Humphreys, Mehdi Mesri, Henry Rodriguez, James J Hsieh, Li Ding, Feng Chen
Author Correction: Epigenetic and transcriptomic characterization reveals progression markers and essential pathways in clear cell renal cell carcinoma. Nature communications 14 (1) (2023)
Yasuhiro Yoshimura, Yoshiharu Muto, Nicolas Ledru, Haojia Wu, Kohei Omachi, Jeffery H Miner, Benjamin D Humphreys
A single-cell multiomic analysis of kidney organoid differentiation. Proceedings of the National Academy of Sciences of the United States of America 120 (20) (2023)
Seong Kyu Han, Michelle T McNulty, Christopher J Benway, Pei Wen, Anya Greenberg, Ana C Onuchic-Whitford, null null, Dongkeun Jang, Jason Flannick, Noël P Burtt, Parker C Wilson, Benjamin D Humphreys, Xiaoquan Wen, Zhe Han, Dongwon Lee, Matthew Gordon Sampson
Mapping genomic regulation of kidney disease and traits through high-resolution and interpretable eQTLs. Nature communications 14 (1) (2023)
Seong Kyu Han, Yoshiharu Muto, Parker C Wilson, Benjamin D Humphreys, Matthew G Sampson, Aravinda Chakravarti, Dongwon Lee
Quality assessment and refinement of chromatin accessibility data using a sequence-based predictive model. Proceedings of the National Academy of Sciences of the United States of America 119 (51) (2022)
Seong Kyu Han, Yoshiharu Muto, Parker C Wilson, Benjamin D Humphreys, Matthew G Sampson, Aravinda Chakravarti, Dongwon Lee
Quality assessment and refinement of chromatin accessibility data using a sequence-based predictive model. Proceedings of the National Academy of Sciences of the United States of America 119 (51) (2022)
Seong Kyu Han, Yoshiharu Muto, Parker C Wilson, Benjamin D Humphreys, Matthew G Sampson, Aravinda Chakravarti, Dongwon Lee
Quality assessment and refinement of chromatin accessibility data using a sequence-based predictive model. Proceedings of the National Academy of Sciences of the United States of America 119 (51) (2022)
Haikuo Li, Benjamin D Humphreys
New functions for basophils identified in kidney fibrosis. Nature immunology 23 (6) (2022)
Seong Kyu Han, Yoshiharu Muto, Parker C Wilson, Benjamin D Humphreys, Matthew G Sampson, Aravinda Chakravarti, Dongwon Lee
Quality assessment and refinement of chromatin accessibility data using a sequence-based predictive model. Proceedings of the National Academy of Sciences of the United States of America 119 (51) (2022)
Hiroki Kobayashi, Helen C Looker, Eiichiro Satake, Francesca D'Addio, Jonathan M Wilson, Pierre-Jean Saulnier, Zaipul Md Dom, Kristina O'Neil, Katsuhito Ihara, Bozena Krolewski, Hannah S Badger, Adriana Petrazzuolo, Domenico Corradi, Andrzej Galecki, Parker C Wilson, Behzad Najafian, Michael Mauer, Monika A Niewczas, Alessandro Doria, Benjamin D Humphreys, Kevin L Duffin, Paolo Fiorina, Robert G Nelson, Andrzej S Krolewski
Neuroblastoma suppressor of tumorigenicity 1 is a circulating protein associated with progression to end-stage kidney disease in diabetes. Science translational medicine 14 (657) (2022)
Seong Kyu Han, Yoshiharu Muto, Parker C Wilson, Benjamin D Humphreys, Matthew G Sampson, Aravinda Chakravarti, Dongwon Lee
Quality assessment and refinement of chromatin accessibility data using a sequence-based predictive model. Proceedings of the National Academy of Sciences of the United States of America 119 (51) (2022)
Parker C Wilson, Yoshiharu Muto, Haojia Wu, Anil Karihaloo, Sushrut S Waikar, Benjamin D Humphreys
Multimodal single cell sequencing implicates chromatin accessibility and genetic background in diabetic kidney disease progression. Nature communications 13 (1) (2022)
Susan E Quaggin, Benjamin D Humphreys
Evolving Demographics of Nephrology Research Workforce in the United States. Clinical journal of the American Society of Nephrology : CJASN 16 (9) (2022)
Yoshiharu Muto, Eryn E Dixon, Yasuhiro Yoshimura, Haojia Wu, Kohei Omachi, Nicolas Ledru, Parker C Wilson, Andrew J King, N Eric Olson, Marvin G Gunawan, Jay J Kuo, Jennifer H Cox, Jeffery H Miner, Stephen L Seliger, Owen M Woodward, Paul A Welling, Terry J Watnick, Benjamin D Humphreys
Defining cellular complexity in human autosomal dominant polycystic kidney disease by multimodal single cell analysis. Nature communications 13 (1) (2022)
Haikuo Li, Benjamin D Humphreys
Single Cell Technologies: Beyond Microfluidics. Kidney360 2 (7) (2021)
Parker C Wilson, Benjamin D Humphreys
Mutational fingerprints reconstruct human cell genealogies. Nature reviews. Nephrology (2021)
Zhen Miao, Benjamin D Humphreys, Andrew P McMahon, Junhyong Kim
Multi-omics integration in the age of million single-cell data. Nature reviews. Nephrology 17 (11) (2021)
Yoshiharu Muto, Parker C Wilson, Nicolas Ledru, Haojia Wu, Henrik Dimke, Sushrut S Waikar, Benjamin D Humphreys
Single cell transcriptional and chromatin accessibility profiling redefine cellular heterogeneity in the adult human kidney. Nature communications 12 (1) (2021)
Benjamin D Humphreys
Bioprinting better kidney organoids. Nature materials 20 (2) (2021)
Andrew F Malone, Haojia Wu, Catrina Fronick, Robert Fulton, Joseph P Gaut, Benjamin D Humphreys
Harnessing Expressed Single Nucleotide Variation and Single Cell RNA Sequencing To Define Immune Cell Chimerism in the Rejecting Kidney Transplant. Journal of the American Society of Nephrology : JASN 31 (9) (2020)
Noriyuki Yamashita, Tetsuro Kusaba, Tomohiro Nakata, Aya Tomita, Tomoharu Ida, Noriko Watanabe-Uehara, Kisho Ikeda, Takashi Kitani, Masahiro Uehara, Yuhei Kirita, Satoaki Matoba, Benjamin D Humphreys, Keiichi Tamagaki
Intratubular epithelial-mesenchymal transition and tubular atrophy after kidney injury in mice. American journal of physiology. Renal physiology 319 (4) (2020)
Anitha Vijayan, Benjamin D Humphreys
SARS-CoV-2 in the kidney: bystander or culprit? Nature reviews. Nephrology 16 (12) (2020)
Haojia Wu, Benjamin D Humphreys
Single Cell Sequencing and Kidney Organoids Generated from Pluripotent Stem Cells. Clinical journal of the American Society of Nephrology : CJASN 15 (4) (2020)
Debby Ngo, Donghai Wen, Yan Gao, Michelle J Keyes, Erika R Drury, Daniel H Katz, Mark D Benson, Sumita Sinha, Dongxiao Shen, Laurie A Farrell, Bennet D Peterson, David J Friedman, Sammy Elmariah, Bessie A Young, J Gustav Smith, Qiong Yang, Ramachandran S Vasan, Martin D Larson, Adolfo Correa, Benjamin D Humphreys, Thomas J Wang, Martin R Pollak, James G Wilson, Robert E Gerszten, Eugene P Rhee
Circulating testican-2 is a podocyte-derived marker of kidney health. Proceedings of the National Academy of Sciences of the United States of America 117 (40) (2020)
Yuhei Kirita, Haojia Wu, Kohei Uchimura, Parker C Wilson, Benjamin D Humphreys
Cell profiling of mouse acute kidney injury reveals conserved cellular responses to injury. Proceedings of the National Academy of Sciences of the United States of America 117 (27) (2020)
Andrew P Morris, Thu H Le, Haojia Wu, Artur Akbarov, Peter J van der Most, Gibran Hemani, George Davey Smith, Anubha Mahajan, Kyle J Gaulton, Girish N Nadkarni, Adan Valladares-Salgado, Niels Wacher-Rodarte, Josyf C Mychaleckyi, Nicole D Dueker, Xiuqing Guo, Yang Hai, Jeffrey Haessler, Yoichiro Kamatani, Adrienne M Stilp, Gu Zhu, James P Cook, Johan Ärnlöv, Susan H Blanton, Martin H de Borst, Erwin P Bottinger, Thomas A Buchanan, Sylvia Cechova, Fadi J Charchar, Pei-Lun Chu, Jeffrey Damman, James M Eales, Ali G Gharavi, Vilmantas Giedraitis, Andrew C Heath, Eli Ipp, Krzysztof Kiryluk, Holly J Kramer, Michiaki Kubo, Anders Larsson, Cecilia M Lindgren, Yingchang Lu, Pamela A F Madden, Grant W Montgomery, George J Papanicolaou, Leslie J Raffel, Ralph L Sacco, Elena Sanchez, Holger Stark, Johan Sundström, Kent D Taylor, Anny H Xiang, Aleksandra Zivkovic, Lars Lind, Erik Ingelsson, Nicholas G Martin, John B Whitfield, Jianwen Cai, Cathy C Laurie, Yukinori Okada, Koichi Matsuda, Charles Kooperberg, Yii-Der Ida Chen, Tatjana Rundek, Stephen S Rich, Ruth J F Loos, Esteban J Parra, Miguel Cruz, Jerome I Rotter, Harold Snieder, Maciej Tomaszewski, Benjamin D Humphreys, Nora Franceschini
Trans-ethnic kidney function association study reveals putative causal genes and effects on kidney-specific disease aetiologies. Nature communications 10 (1) (2019)
Parker C Wilson, Benjamin D Humphreys
Single-cell genomics and gene editing: implications for nephrology. Nature reviews. Nephrology 15 (2) (2019)
Parker C Wilson, Benjamin D Humphreys
Kidney and organoid single-cell transcriptomics: the end of the beginning. Pediatric nephrology (Berlin, Germany) 35 (2) (2019)
Haojia Wu, Chun-Fu Lai, Monica Chang-Panesso, Benjamin D Humphreys
Proximal Tubule Translational Profiling during Kidney Fibrosis Reveals Proinflammatory and Long Noncoding RNA Expression Patterns with Sexual Dimorphism. Journal of the American Society of Nephrology : JASN 31 (1) (2019)
Parker C Wilson, Haojia Wu, Yuhei Kirita, Kohei Uchimura, Nicolas Ledru, Helmut G Rennke, Paul A Welling, Sushrut S Waikar, Benjamin D Humphreys
The single-cell transcriptomic landscape of early human diabetic nephropathy. Proceedings of the National Academy of Sciences of the United States of America 116 (39) (2019)
Haojia Wu, Yuhei Kirita, Erinn L Donnelly, Benjamin D Humphreys
Authors' Reply. Journal of the American Society of Nephrology : JASN 30 (4) (2019)
Benjamin D Humphreys, Mark A Knepper
Prioritizing Functional Goals as We Rebuild the Kidney. Journal of the American Society of Nephrology : JASN 30 (12) (2019)
Yoichiro Ikeda, Zhao Sun, Xiao Ru, Luk H Vandenberghe, Benjamin D Humphreys
Efficient Gene Transfer to Kidney Mesenchymal Cells Using a Synthetic Adeno-Associated Viral Vector. Journal of the American Society of Nephrology : JASN 29 (9) (2018)
Eoghainín Ó hAinmhire, Haojia Wu, Yoshiharu Muto, Erinn L Donnelly, Flavia G Machado, Lucy X Fan, Monica Chang-Panesso, Benjamin D Humphreys
A conditionally immortalized Gli1-positive kidney mesenchymal cell line models myofibroblast transition. American journal of physiology. Renal physiology 316 (1) (2018)
Haojia Wu, Andrew F Malone, Erinn L Donnelly, Yuhei Kirita, Kohei Uchimura, Sai M Ramakrishnan, Joseph P Gaut, Benjamin D Humphreys
Single-Cell Transcriptomics of a Human Kidney Allograft Biopsy Specimen Defines a Diverse Inflammatory Response. Journal of the American Society of Nephrology : JASN 29 (8) (2018)