Aadel A Chaudhuri (Aadel Chaudhuri)

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 51

Top Topics

Small Cell Lung Cancer

Circulating Tumor

Top Venues

Clinical cancer research : an official journal of the American Association for Cancer Research

NPJ precision oncology

medRxiv : the preprint server for health sciences

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Tej D Azad, Shigeki Nanjo, Michael C Jin, Jacob J Chabon, David M Kurtz, Aadel A Chaudhuri, Ian D Connolly, Angela Bik-Yu Hui, Chih Long Liu, David Merriott, Ryan B Ko, Christopher Yoo, Justin Carter, Emily Chen, Rene Bonilla, Akito Hata, Nobuyuki Katakami, Kei Irie, Seiji Yano, Ross A Okimoto, Trever G Bivona, Aaron M Newman, Michael Iv, Seema Nagpal, Melanie Hayden Gephart, Ash A Alizadeh, Maximillian Diehn
Quantification of cerebrospinal fluid tumor DNA in lung cancer patients with suspected leptomeningeal carcinomatosis. NPJ precision oncology 8 (1) (2024)
Bruna Pellini, Aadel A Chaudhuri
Racial Disparities in Early-Stage NSCLC Treatment: A Call for Action. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology 33 (6) (2024)
Tej D Azad, Shigeki Nanjo, Michael C Jin, Jacob J Chabon, David M Kurtz, Aadel A Chaudhuri, Ian D Connolly, Angela Bik-Yu Hui, Chih Long Liu, David Merriott, Ryan B Ko, Christopher Yoo, Justin Carter, Emily Chen, Rene Bonilla, Akito Hata, Nobuyuki Katakami, Kei Irie, Seiji Yano, Ross A Okimoto, Trever G Bivona, Aaron M Newman, Michael Iv, Seema Nagpal, Melanie Hayden Gephart, Ash A Alizadeh, Maximillian Diehn
Quantification of cerebrospinal fluid tumor DNA in lung cancer patients with suspected leptomeningeal carcinomatosis. NPJ precision oncology 8 (1) (2024)
Tej D Azad, Shigeki Nanjo, Michael C Jin, Jacob J Chabon, David M Kurtz, Aadel A Chaudhuri, Ian D Connolly, Angela Bik-Yu Hui, Chih Long Liu, David Merriott, Ryan B Ko, Christopher Yoo, Justin Carter, Emily Chen, Rene Bonilla, Akito Hata, Nobuyuki Katakami, Kei Irie, Seiji Yano, Ross A Okimoto, Trever G Bivona, Aaron M Newman, Michael Iv, Seema Nagpal, Melanie Hayden Gephart, Ash A Alizadeh, Maximillian Diehn
Quantification of cerebrospinal fluid tumor DNA in lung cancer patients with suspected leptomeningeal carcinomatosis. NPJ precision oncology 8 (1) (2024)
Minji Kang, Jose Juan Almagro Armenteros, Gunsagar Singh Gulati, Rachel Gleyzer, Susanna Avagyan, Erin L Brown, Wubing Zhang, Abul Usmani, Noah J Earland, Zhenqin Wu, James Y Zou, Ryan C Fields, David Y Chen, Aadel A Chaudhuri, Aaron M Newman
Mapping single-cell developmental potential in health and disease with interpretable deep learning. bioRxiv : the preprint server for biology (2024)
R Taylor Sundby, Jeffrey J Szymanski, Alexander Pan, Paul A Jones, Sana Z Mahmood, Olivia H Reid, Divya Srihari, Amy E Armstrong, Stacey Chamberlain, Sanita Burgic, Kara Weekley, Béga Murray, Sneh Patel, Faridi Qaium, Andrea N Lucas, Margaret Fagan, Anne Dufek, Christian F Meyer, Natalie B Collins, Christine A Pratilas, Eva Dombi, Andrea M Gross, Ae Rang Kim, John S A Chrisinger, Carina A Dehner, Brigitte C Widemann, Angela C Hirbe, Aadel A Chaudhuri, Jack F Shern
Early detection of malignant and pre-malignant peripheral nerve tumors using cell-free DNA fragmentomics. Clinical cancer research : an official journal of the American Association for Cancer Research (2024)
R Taylor Sundby, Jeffrey J Szymanski, Alexander Pan, Paul A Jones, Sana Z Mahmood, Olivia H Reid, Divya Srihari, Amy E Armstrong, Stacey Chamberlain, Sanita Burgic, Kara Weekley, Béga Murray, Sneh Patel, Faridi Qaium, Andrea N Lucas, Margaret Fagan, Anne Dufek, Christian F Meyer, Natalie B Collins, Christine A Pratilas, Eva Dombi, Andrea M Gross, Ae Rang Kim, John S A Chrisinger, Carina A Dehner, Brigitte C Widemann, Angela C Hirbe, Aadel A Chaudhuri, Jack F Shern
Early detection of malignant and pre-malignant peripheral nerve tumors using cell-free DNA fragmentomics. medRxiv : the preprint server for health sciences (2024)
Bruna Pellini, Aadel A Chaudhuri
Racial disparities in early-stage NSCLC treatment: A Call for Action. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology (2024)
R Taylor Sundby, Jeffrey J Szymanski, Alexander Pan, Paul A Jones, Sana Z Mahmood, Olivia H Reid, Divya Srihari, Amy E Armstrong, Stacey Chamberlain, Sanita Burgic, Kara Weekley, Béga Murray, Sneh Patel, Faridi Qaium, Andrea N Lucas, Margaret Fagan, Anne Dufek, Christian F Meyer, Natalie B Collins, Christine A Pratilas, Eva Dombi, Andrea M Gross, Ae Rang Kim, John S A Chrisinger, Carina A Dehner, Brigitte C Widemann, Angela C Hirbe, Aadel A Chaudhuri, Jack F Shern
Early detection of malignant and pre-malignant peripheral nerve tumors using cell-free DNA fragmentomics. medRxiv : the preprint server for health sciences (2024)
Pradeep Singh Chauhan, Irfan Alahi, Savar Sinha, Elisa M Ledet, Ryan Mueller, Jessica Linford, Alexander L Shiang, Jace Webster, Lilli Greiner, Breanna Yang, Gabris Ni, Ha X Dang, Debanjan Saha, Ramandeep K Babbra, Wenjia Feng, Peter K Harris, Faridi Qaium, Dzifa Yawa Duose, Alexander Sanchez-Espitia, Alexander D Sherry, Ellen B Jaeger, Patrick J Miller, Sydney A Caputo, Jacob J Orme, Fabrice Lucien, Sean S Park, Chad Tang, Russell K Pachynski, A Oliver Sartor, Christopher A Maher, Aadel A Chaudhuri
Genomic and epigenomic analysis of plasma cell-free DNA identifies stemness features associated with worse survival in lethal prostate cancer. Clinical cancer research : an official journal of the American Association for Cancer Research (2024)
R Taylor Sundby, Jeffrey J Szymanski, Alexander Pan, Paul A Jones, Sana Z Mahmood, Olivia H Reid, Divya Srihari, Amy E Armstrong, Stacey Chamberlain, Sanita Burgic, Kara Weekley, Béga Murray, Sneh Patel, Faridi Qaium, Andrea N Lucas, Margaret Fagan, Anne Dufek, Christian F Meyer, Natalie B Collins, Christine A Pratilas, Eva Dombi, Andrea M Gross, Ae Rang Kim, John S A Chrisinger, Carina A Dehner, Brigitte C Widemann, Angela C Hirbe, Aadel A Chaudhuri, Jack F Shern
Early detection of malignant and pre-malignant peripheral nerve tumors using cell-free DNA fragmentomics. medRxiv : the preprint server for health sciences (2024)
Pradeep Singh Chauhan, Irfan Alahi, Savar Sinha, Elisa M Ledet, Ryan Mueller, Jessica Linford, Alexander L Shiang, Jace Webster, Lilli Greiner, Breanna Yang, Gabris Ni, Ha X Dang, Debanjan Saha, Ramandeep K Babbra, Wenjia Feng, Peter K Harris, Faridi Qaium, Dzifa Yawa Duose, Alexander Sanchez-Espitia, Alexander D Sherry, Ellen B Jaeger, Patrick J Miller, Sydney A Caputo, Jacob J Orme, Fabrice Lucien, Sean S Park, Chad Tang, Russell K Pachynski, A Oliver Sartor, Christopher A Maher, Aadel A Chaudhuri
Genomic and epigenomic analysis of plasma cell-free DNA identifies stemness features associated with worse survival in lethal prostate cancer. Clinical cancer research : an official journal of the American Association for Cancer Research (2024)
R Taylor Sundby, Jeffrey J Szymanski, Alexander Pan, Paul A Jones, Sana Z Mahmood, Olivia H Reid, Divya Srihari, Amy E Armstrong, Stacey Chamberlain, Sanita Burgic, Kara Weekley, Béga Murray, Sneh Patel, Andrea N Lucas, Margaret Fagan, Anne Dufek, Christian F Meyer, Natalie B Collins, Brian A Van Tine, Eva Dombi, Andrea M Gross, Ae Rang Kim, John S A Chrisinger, Carina A Dehner, Brigitte C Widemann, Angela C Hirbe, Aadel A Chaudhuri, Jack F Shern
Early detection of malignant and pre-malignant peripheral nerve tumors using cell-free DNA fragmentomics. medRxiv : the preprint server for health sciences (2024)
R Taylor Sundby, Jeffrey J Szymanski, Alexander Pan, Paul A Jones, Sana Z Mahmood, Olivia H Reid, Divya Srihari, Amy E Armstrong, Stacey Chamberlain, Sanita Burgic, Kara Weekley, Béga Murray, Sneh Patel, Faridi Qaium, Andrea N Lucas, Margaret Fagan, Anne Dufek, Christian F Meyer, Natalie B Collins, Christine A Pratilas, Eva Dombi, Andrea M Gross, Ae Rang Kim, John S A Chrisinger, Carina A Dehner, Brigitte C Widemann, Angela C Hirbe, Aadel A Chaudhuri, Jack F Shern
Early detection of malignant and pre-malignant peripheral nerve tumors using cell-free DNA fragmentomics. Clinical cancer research : an official journal of the American Association for Cancer Research (2024)
R Taylor Sundby, Jeffrey J Szymanski, Alexander Pan, Paul A Jones, Sana Z Mahmood, Olivia H Reid, Divya Srihari, Amy E Armstrong, Stacey Chamberlain, Sanita Burgic, Kara Weekley, Béga Murray, Sneh Patel, Faridi Qaium, Andrea N Lucas, Margaret Fagan, Anne Dufek, Christian F Meyer, Natalie B Collins, Brian A Van Tine, Christine A Pratilas, Eva Dombi, Andrea M Gross, Ae Rang Kim, John S A Chrisinger, Carina A Dehner, Brigitte C Widemann, Angela C Hirbe, Aadel A Chaudhuri, Jack F Shern
Early detection of malignant and pre-malignant peripheral nerve tumors using cell-free DNA fragmentomics. medRxiv : the preprint server for health sciences (2024)
R Taylor Sundby, Jeffrey J Szymanski, Alexander Pan, Paul A Jones, Sana Z Mahmood, Olivia H Reid, Divya Srihari, Amy E Armstrong, Stacey Chamberlain, Sanita Burgic, Kara Weekley, Béga Murray, Sneh Patel, Faridi Qaium, Andrea N Lucas, Margaret Fagan, Anne Dufek, Christian F Meyer, Natalie B Collins, Brian A Van Tine, Christine A Pratilas, Eva Dombi, Andrea M Gross, Ae Rang Kim, John S A Chrisinger, Carina A Dehner, Brigitte C Widemann, Angela C Hirbe, Aadel A Chaudhuri, Jack F Shern
Early detection of malignant and pre-malignant peripheral nerve tumors using cell-free DNA fragmentomics. medRxiv : the preprint server for health sciences (2024)
R Taylor Sundby, Jeffrey J Szymanski, Alexander Pan, Paul A Jones, Sana Z Mahmood, Olivia H Reid, Divya Srihari, Amy E Armstrong, Stacey Chamberlain, Sanita Burgic, Kara Weekley, Béga Murray, Sneh Patel, Faridi Qaium, Andrea N Lucas, Margaret Fagan, Anne Dufek, Christian F Meyer, Natalie B Collins, Christine A Pratilas, Eva Dombi, Andrea M Gross, Ae Rang Kim, John S A Chrisinger, Carina A Dehner, Brigitte C Widemann, Angela C Hirbe, Aadel A Chaudhuri, Jack F Shern
Early detection of malignant and pre-malignant peripheral nerve tumors using cell-free DNA fragmentomics. medRxiv : the preprint server for health sciences (2024)
Erik P Storrs, Prathamesh Chati, Abul Usmani, Ian Sloan, Bradley A Krasnick, Ramandeep Babbra, Peter K Harris, Chloe M Sachs, Faridi Qaium, Deyali Chatterjee, Chris Wetzel, S Peter Goedegebuure, Thomas Hollander, Hephzibah Anthony, Jennifer Ponce, Ateeq M Khaliq, Shahed Badiyan, Hyun Kim, David G Denardo, Gabriel D Lang, Natalie D Cosgrove, Vladimir M Kushnir, Dayna S Early, Ashiq Masood, Kian-Huat Lim, William G Hawkins, Li Ding, Ryan C Fields, Koushik K Das, Aadel A Chaudhuri
High-dimensional deconstruction of pancreatic cancer identifies tumor microenvironmental and developmental stemness features that predict survival. NPJ precision oncology 7 (1) (2023)
Yige Wu, Nadezhda V Terekhanova, Wagma Caravan, Nataly Naser Al Deen, Preet Lal, Siqi Chen, Chia-Kuei Mo, Song Cao, Yize Li, Alla Karpova, Ruiyang Liu, Yanyan Zhao, Andrew Shinkle, Ilya Strunilin, Cody Weimholt, Kazuhito Sato, Lijun Yao, Mamatha Serasanambati, Xiaolu Yang, Matthew A Wyczalkowski, Houxiang Zhu, Daniel Cui Zhou, Reyka G Jayasinghe, Daniel Mendez, Michael C Wendl, David Clark, Chelsea Newton, Yijun Ruan, Melissa A Reimers, Russell K Pachynski, Chris Kinsinger, Scott D Jewell, Daniel W Chan, Hui Zhang, Aadel A Chaudhuri, Milan G Chheda, Benjamin D Humphreys, Mehdi Mesri, Henry Rodriguez, James J Hsieh, Li Ding, Feng Chen
Epigenetic and transcriptomic characterization reveals progression markers and essential pathways in clear cell renal cell carcinoma. Nature communications 14 (1) (2023)
Bruna Pellini, Aadel A Chaudhuri
ctDNA Monitoring for Small Cell Lung Cancer: Ready for Prime Time? Clinical cancer research : an official journal of the American Association for Cancer Research (2023)
Nicholas P Semenkovich, Jeffrey J Szymanski, Noah Earland, Pradeep S Chauhan, Bruna Pellini, Aadel A Chaudhuri
Genomic approaches to cancer and minimal residual disease detection using circulating tumor DNA. Journal for immunotherapy of cancer 11 (6) (2023)
Yige Wu, Nadezhda V Terekhanova, Wagma Caravan, Nataly Naser Al Deen, Preet Lal, Siqi Chen, Chia-Kuei Mo, Song Cao, Yize Li, Alla Karpova, Ruiyang Liu, Yanyan Zhao, Andrew Shinkle, Ilya Strunilin, Cody Weimholt, Kazuhito Sato, Lijun Yao, Mamatha Serasanambati, Xiaolu Yang, Matthew A Wyczalkowski, Houxiang Zhu, Daniel Cui Zhou, Reyka G Jayasinghe, Daniel Mendez, Michael C Wendl, David Clark, Chelsea Newton, Yijun Ruan, Melissa A Reimers, Russell K Pachynski, Chris Kinsinger, Scott D Jewell, Daniel W Chan, Hui Zhang, Aadel A Chaudhuri, Milan G Chheda, Benjamin D Humphreys, Mehdi Mesri, Henry Rodriguez, James J Hsieh, Li Ding, Feng Chen
Epigenetic and transcriptomic characterization reveals progression markers and essential pathways in clear cell renal cell carcinoma. Nature communications 14 (1) (2023)
Pradeep S Chauhan, Alexander Shiang, Irfan Alahi, R Taylor Sundby, Wenjia Feng, Bilge Gungoren, Cayce Nawaf, Kevin Chen, Ramandeep K Babbra, Peter K Harris, Faridi Qaium, Casey Hatscher, Anna Antiporda, Lindsey Brunt, Lindsey R Mayer, Jack F Shern, Brian C Baumann, Eric H Kim, Melissa A Reimers, Zachary L Smith, Aadel A Chaudhuri
Urine cell-free DNA multi-omics to detect MRD and predict survival in bladder cancer patients. NPJ precision oncology 7 (1) (2023)
Nicholas P Semenkovich, Shahed N Badiyan, Pamela P Samson, Hayley B Stowe, Yun E Wang, Rachel Star, Siddhartha Devarakonda, Ramaswamy Govindan, Saiama N Waqar, Clifford G Robinson, Gregory Vlacich, Bruna Pellini, Aadel A Chaudhuri
Pre-radiotherapy ctDNA liquid biopsy for risk stratification of oligometastatic non-small cell lung cancer. NPJ precision oncology 7 (1) (2023)
Yige Wu, Nadezhda V Terekhanova, Wagma Caravan, Nataly Naser Al Deen, Preet Lal, Siqi Chen, Chia-Kuei Mo, Song Cao, Yize Li, Alla Karpova, Ruiyang Liu, Yanyan Zhao, Andrew Shinkle, Ilya Strunilin, Cody Weimholt, Kazuhito Sato, Lijun Yao, Mamatha Serasanambati, Xiaolu Yang, Matthew A Wyczalkowski, Houxiang Zhu, Daniel Cui Zhou, Reyka G Jayasinghe, Daniel Mendez, Michael C Wendl, David Clark, Chelsea Newton, Yijun Ruan, Melissa A Reimers, Russell K Pachynski, Chris Kinsinger, Scott D Jewell, Daniel W Chan, Hui Zhang, Aadel A Chaudhuri, Milan G Chheda, Benjamin D Humphreys, Mehdi Mesri, Henry Rodriguez, James J Hsieh, Li Ding, Feng Chen
Epigenetic and transcriptomic characterization reveals progression markers and essential pathways in clear cell renal cell carcinoma. Nature communications 14 (1) (2023)
Noah J Earland, Nicholas P Semenkovich, Ricardo J Ramirez, Sophie P Gerndt, Peter K Harris, Zhuosheng Gu, Andrew I Hearn, Matthew J Inkman, Jeffrey J Szymanski, Damion Whitfield, Benjamin M Wahle, Zhongping Xu, Kevin Chen, Irfan Alahi, Gabris Ni, Andrew Chen, Wendy Winckler, Jin Zhang, Aadel A Chaudhuri, Jose P Zevallos
Sensitive MRD detection from lymphatic fluid after surgery in HPV-associated oropharyngeal cancer. Clinical cancer research : an official journal of the American Association for Cancer Research (2023)
Yige Wu, Nadezhda V Terekhanova, Wagma Caravan, Nataly Naser Al Deen, Preet Lal, Siqi Chen, Chia-Kuei Mo, Song Cao, Yize Li, Alla Karpova, Ruiyang Liu, Yanyan Zhao, Andrew Shinkle, Ilya Strunilin, Cody Weimholt, Kazuhito Sato, Lijun Yao, Mamatha Serasanambati, Xiaolu Yang, Matthew A Wyczalkowski, Houxiang Zhu, Daniel Cui Zhou, Reyka G Jayasinghe, Daniel Mendez, Michael C Wendl, David Clark, Chelsea Newton, Yijun Ruan, Melissa A Reimers, Russell K Pachynski, Chris Kinsinger, Scott D Jewell, Daniel W Chan, Hui Zhang, Aadel A Chaudhuri, Milan G Chheda, Benjamin D Humphreys, Mehdi Mesri, Henry Rodriguez, James J Hsieh, Li Ding, Feng Chen
Author Correction: Epigenetic and transcriptomic characterization reveals progression markers and essential pathways in clear cell renal cell carcinoma. Nature communications 14 (1) (2023)
Jinyun Yuan, Lu Xu, Chih-Yen Chien, Yaoheng Yang, Yimei Yue, Siaka Fadera, Andrew H Stark, Katherine E Schwetye, Arash Nazeri, Rupen Desai, Umeshkumar Athiraman, Aadel A Chaudhuri, Hong Chen, Eric C Leuthardt
First-in-human prospective trial of sonobiopsy in high-grade glioma patients using neuronavigation-guided focused ultrasound. NPJ precision oncology 7 (1) (2023)
Noah J Earland, Wubing Zhang, Abul Usmani, Aishwarya Nene, Antonella Bacchiocchi, David Y Chen, Mario Sznol, Ruth Halaban, Aadel A Chaudhuri, Aaron M Newman
CD4 T cells and toxicity from immune checkpoint blockade. Immunological reviews (2023)
Aadel A Chaudhuri, Nicholas P Semenkovich, Pamela Samson, Shahed Badiyan, Gregory Vlacich, Hayley Stowe, Yun Wang, Rachel Star, Siddhartha Devarakonda, Ramaswamy Govindan, Saiama Waqar, Clifford Robinson, Bruna Pellini
Pre-radiotherapy ctDNA liquid biopsy for risk stratification of oligometastatic non-small cell lung cancer. Research square (2023)
Yige Wu, Nadezhda V Terekhanova, Wagma Caravan, Nataly Naser Al Deen, Preet Lal, Siqi Chen, Chia-Kuei Mo, Song Cao, Yize Li, Alla Karpova, Ruiyang Liu, Yanyan Zhao, Andrew Shinkle, Ilya Strunilin, Cody Weimholt, Kazuhito Sato, Lijun Yao, Mamatha Serasanambati, Xiaolu Yang, Matthew A Wyczalkowski, Houxiang Zhu, Daniel Cui Zhou, Reyka G Jayasinghe, Daniel Mendez, Michael C Wendl, David Clark, Chelsea Newton, Yijun Ruan, Melissa A Reimers, Russell K Pachynski, Chris Kinsinger, Scott D Jewell, Daniel W Chan, Hui Zhang, Aadel A Chaudhuri, Milan G Chheda, Benjamin D Humphreys, Mehdi Mesri, Henry Rodriguez, James J Hsieh, Li Ding, Feng Chen
Author Correction: Epigenetic and transcriptomic characterization reveals progression markers and essential pathways in clear cell renal cell carcinoma. Nature communications 14 (1) (2023)
Nicholas P Semenkovich, Jeffrey J Szymanski, Noah Earland, Pradeep S Chauhan, Bruna Pellini, Aadel A Chaudhuri
Genomic approaches to cancer and minimal residual disease detection using circulating tumor DNA. Journal for immunotherapy of cancer 11 (6) (2023)
Bruna Pellini, Aadel A Chaudhuri
ctDNA Monitoring for Small Cell Lung Cancer: Ready for Prime Time? Clinical cancer research : an official journal of the American Association for Cancer Research (2023)
Pradeep S Chauhan, Alexander Shiang, Irfan Alahi, R Taylor Sundby, Wenjia Feng, Bilge Gungoren, Cayce Nawaf, Kevin Chen, Ramandeep K Babbra, Peter K Harris, Faridi Qaium, Casey Hatscher, Anna Antiporda, Lindsey Brunt, Lindsey R Mayer, Jack F Shern, Brian C Baumann, Eric H Kim, Melissa A Reimers, Zachary L Smith, Aadel A Chaudhuri
Urine cell-free DNA multi-omics to detect MRD and predict survival in bladder cancer patients. NPJ precision oncology 7 (1) (2023)
Bruna Pellini, Aadel A Chaudhuri
ctDNA Monitoring for Small Cell Lung Cancer: Ready for Prime Time? Clinical cancer research : an official journal of the American Association for Cancer Research (2023)
Pradeep Singh Chauhan, Irfan Alahi, Savar Sinha, Alexander L Shiang, Ryan Mueller, Jace Webster, Ha X Dang, Debanjan Saha, Lilli Greiner, Breanna Yang, Gabris Ni, Elisa M Ledet, Ramandeep K Babbra, Wenjia Feng, Peter K Harris, Faridi Qaium, Ellen B Jaeger, Patrick J Miller, Sydney A Caputo, A Oliver Sartor, Russell K Pachynski, Christopher A Maher, Aadel A Chaudhuri
Genomic and epigenomic analysis of plasma cell-free DNA identifies stemness features associated with worse survival in AR -altered lethal prostate cancer. medRxiv : the preprint server for health sciences (2023)
Bruna Pellini, Aadel A Chaudhuri
ctDNA Monitoring for Small Cell Lung Cancer: Ready for Prime Time? Clinical cancer research : an official journal of the American Association for Cancer Research (2023)
Pradeep S Chauhan, Alexander Shiang, Irfan Alahi, R Taylor Sundby, Wenjia Feng, Bilge Gungoren, Cayce Nawaf, Kevin Chen, Ramandeep K Babbra, Peter K Harris, Faridi Qaium, Casey Hatscher, Anna Antiporda, Lindsey Brunt, Lindsey R Mayer, Jack F Shern, Brian C Baumann, Eric H Kim, Melissa A Reimers, Zachary L Smith, Aadel A Chaudhuri
Urine cell-free DNA multi-omics to detect MRD and predict survival in bladder cancer patients. NPJ precision oncology 7 (1) (2023)
Diana Merino Vega, Katherine K Nishimura, Névine Zariffa, Jeffrey C Thompson, Antje Hoering, Vanessa Cilento, Adam Rosenthal, Valsamo Anagnostou, Jonathan Baden, Julia A Beaver, Aadel A Chaudhuri, Darya Chudova, Alexander D Fine, Joseph Fiore, Rachel Hodge, Darren Hodgson, Nathan Hunkapiller, Daniel M Klass, Julie Kobie, Carol Peña, Gene A Pennello, Neil Peterman, Reena Philip, Katie J Quinn, David Raben, Gary L Rosner, Mark Sausen, Ayse Tezcan, Qi Xia, Jing Yi, Amanda G Young, Mark D Stewart, Erica L Carpenter, Charu Aggarwal, Jeff D Allen
Changes in Circulating Tumor DNA Reflect Clinical Benefit Across Multiple Studies of Patients With Non-Small-Cell Lung Cancer Treated With Immune Checkpoint Inhibitors. JCO precision oncology 6 (2022)
Viswam S Nair, Angela Bik-Yu Hui, Jacob J Chabon, Mohammad S Esfahani, Henning Stehr, Barzin Y Nabet, Li Zhou, Aadel A Chaudhuri, Jalen Benson, Kelsey Ayers, Harmeet Bedi, Meghan Ramsey, Ryan Van Wert, Sanja Antic, Natalie S Lui, Leah Backhus, Mark Berry, Arthur W Sung, Pierre P Massion, Joseph B Shrager, Ash A Alizadeh, Maximillian Diehn
Genomic Profiling of Bronchoalveolar Lavage Fluid in Lung Cancer. Cancer research 82 (16) (2022)
Alexander X Lozano, Aadel A Chaudhuri, Aishwarya Nene, Antonietta Bacchiocchi, Noah Earland, Matthew D. Vesely, Abul Usmani, Brandon E Turner, Chloé Beate Steen, Bogdan A Luca, Ti Badri, Gunsagar S Gulati, Milad R Vahid, Farnaz Khameneh, Peter K Harris, David Y Chen, Kavita Dhodapkar, Mario Sznol, Ruth Halaban, Aaron M Newman
T cell characteristics associated with toxicity to immune checkpoint blockade in patients with melanoma. Nature medicine 28 (2) (2022)
Yariswamy Manjunath, Kanve Nagaraj Suvilesh, Jonathan B Mitchem, Diego M Avella Patino, Eric T Kimchi, Kevin F Staveley-O'Carroll, Klaus Pantel, Huang Yi, Guangfu Li, Peter K Harris, Aadel A Chaudhuri, Jussuf T Kaifi
Circulating Tumor-Macrophage Fusion Cells and Circulating Tumor Cells Complement Non-Small-Cell Lung Cancer Screening in Patients With Suspicious Lung-RADS 4 Nodules. JCO precision oncology 6 (2022)
Bruna Pellini, Aadel A Chaudhuri
Circulating Tumor DNA Minimal Residual Disease Detection of Non-Small-Cell Lung Cancer Treated With Curative Intent. Journal of clinical oncology : official journal of the American Society of Clinical Oncology 40 (6) (2022)
Kevin Chen, Misty D Shields, Pradeep S Chauhan, Ricardo J Ramirez, Peter K Harris, Melissa A Reimers, Jose P Zevallos, Andrew A Davis, Bruna Pellini, Aadel A Chaudhuri
Commercial ctDNA Assays for Minimal Residual Disease Detection of Solid Tumors. Molecular diagnosis & therapy 25 (6) (2021)
Pradeep Singh Chauhan, Kevin Chen, Ramandeep K Babbra, Wenjia Feng, Nadja Pejovic, Armaan Nallicheri, Peter K Harris, Katherine Dienstbach, Andrew Atkocius, Lenon Maguire, Faridi Qaium, Jeffrey J Szymanski, Brian C Baumann, Li Ding, Dengfeng Cao, Melissa A Reimers, Eric H Kim, Zachary L Smith, Vivek K Arora, Aadel A Chaudhuri
Urine tumor DNA detection of minimal residual disease in muscle-invasive bladder cancer treated with curative-intent radical cystectomy: A cohort study. PLoS medicine 18 (8) (2021)
Jeffrey J Szymanski, R Taylor Sundby, Paul A Jones, Divya Srihari, Noah J Earland, Peter K Harris, Wenjia Feng, Faridi Qaium, Haiyan Lei, David Roberts, Michele Landeau, Jamie Bell, Yi Huang, Leah Hoffman, Melissa Spencer, Matthew B Spraker, Li Ding, Brigitte C Widemann, Jack F Shern, Angela C Hirbe, Aadel A Chaudhuri
Cell-free DNA ultra-low-pass whole genome sequencing to distinguish malignant peripheral nerve sheath tumor (MPNST) from its benign precursor lesion: A cross-sectional study. PLoS medicine 18 (8) (2021)
Bruna Pellini, Nadja Pejovic, Wenjia Feng, Noah J Earland, Peter K Harris, Abul Usmani, Jeffrey J Szymanski, Faridi Qaium, Jacqueline L Mudd, Marvin Petty, Yuqiu Jiang, Ashla Singh, Christopher A Maher, Lauren E Henke, Haeseong Park, Matthew A Ciorba, Hyun Kim, Matthew G Mutch, Katrina S Pedersen, Benjamin R Tan, William G Hawkins, Ryan C Fields, Aadel A Chaudhuri
ctDNA MRD Detection and Personalized Oncogenomic Analysis in Oligometastatic Colorectal Cancer From Plasma and Urine. JCO precision oncology 5 (2021)
Re-I Chin, Kevin Chen, Abul Usmani, Chanelle Chua, Peter K Harris, Michael S Binkley, Tej D Azad, Jonathan C Dudley, Aadel A Chaudhuri
Detection of Solid Tumor Molecular Residual Disease (MRD) Using Circulating Tumor DNA (ctDNA). Molecular diagnosis & therapy 23 (3) (2020)
Matthew D Hellmann, Barzin Y Nabet, Hira Rizvi, Aadel A Chaudhuri, Daniel K Wells, Mark P S Dunphy, Jacob J Chabon, Chih Long Liu, Angela B Hui, Kathryn C Arbour, Jia Luo, Isabel R Preeshagul, Everett J Moding, Diego Almanza, Rene F Bonilla, Jennifer L Sauter, Hyejin Choi, Megan Tenet, Mohsen Abu-Akeel, Andrew J Plodkowski, Rocio Perez Johnston, Christopher H Yoo, Ryan B Ko, Henning Stehr, Linda Gojenola, Heather A Wakelee, Sukhmani K Padda, Joel W Neal, Jamie E Chaft, Mark G Kris, Charles M Rudin, Taha Merghoub, Bob T Li, Ash A Alizadeh, Maximilian Diehn
Circulating Tumor DNA Analysis to Assess Risk of Progression after Long-term Response to PD-(L)1 Blockade in NSCLC. Clinical cancer research : an official journal of the American Association for Cancer Research 26 (12) (2020)
Jacob J Chabon, Emily G Hamilton, David M Kurtz, Mohammad S Esfahani, Everett J Moding, Henning Stehr, Joseph Schroers-Martin, Barzin Y Nabet, Binbin Chen, Aadel A Chaudhuri, Chih Long Liu, Angela B Hui, Michael C Jin, Tej D Azad, Diego Almanza, Young-Jun Jeon, Monica C Nesselbush, Lyron Co Ting Keh, Rene F Bonilla, Christopher H Yoo, Ryan B Ko, Emily L Chen, David J Merriott, Pierre P Massion, Aaron S Mansfield, Jin Jen, Hong Z Ren, Steven H Lin, Christina L Costantino, Risa Burr, Robert Tibshirani, Sanjiv Sam Gambhir, Gerald J Berry, Kristin C Jensen, Robert B West, Joel W Neal, Heather A Wakelee, Billy W Loo, Christian A Kunder, Ann N Leung, Natalie S Lui, Mark F Berry, Joseph B Shrager, Viswam S Nair, Daniel A Haber, Lecia V Sequist, Ash A Alizadeh, Maximillian Diehn
Integrating genomic features for non-invasive early lung cancer detection. Nature 580 (7802) (2020)
Siddhartha Devarakonda, Sumithra Sankararaman, Brett H Herzog, Kathryn A Gold, Saiama N Waqar, Jeffrey P Ward, Victoria M Raymond, Richard B Lanman, Aadel A Chaudhuri, Taofeek K Owonikoko, Bob T Li, John T Poirier, Charles M Rudin, Ramaswamy Govindan, Daniel Morgensztern
Circulating Tumor DNA Profiling in Small-Cell Lung Cancer Identifies Potentially Targetable Alterations. Clinical cancer research : an official journal of the American Association for Cancer Research 25 (20) (2019)