David Swarbreck

ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 17

Top Venues

Nature communications

Genome research

Heredity

Proceedings of the National Academy of Sciences of the United States of America

Earlham Institute

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Earlham Institute Nov 01 2010

United Kingdom

Head of Core Bioinformatics :: Digital Biology

Publications

Will J Nash, Angela Man, Seanna McTaggart, Kendall Baker, Tom Barker, Leah Catchpole, Alex Durrant, Karim Gharbi, Naomi Irish, Gemy Kaithakottil, Debby Ku, Aaliyah Providence, Felix Shaw, David Swarbreck, Chris Watkins, Ann M McCartney, Giulio Formenti, Alice Mouton, Noel Vella, Björn M von Reumont, Adriana Vella, Wilfried Haerty
The genome sequence of the Violet Carpenter Bee, Xylocopa violacea (Linnaeus, 1785): a hymenopteran species undergoing range expansion. Heredity (2024)
Katharina Vollheyde, Quentin M Dudley, Ting Yang, Mehmet Tufan Öz, Davide Mancinotti, Mariano Olivera Fedi, Darren Heavens, Gareth Linsmith, Monika Chhetry, Mark A Smedley, Wendy A Harwood, David Swarbreck, Fernando Geu-Flores, Nicola Joan Patron
An improved Nicotiana benthamiana bioproduction chassis provides novel insights into nicotine biosynthesis. The New phytologist (2023)
Anne Edwards, Isaac Njaci, Abhimanyu Sarkar, Zhouqian Jiang, Gemy George Kaithakottil, Christopher Moore, Jitender Cheema, Clare E M Stevenson, Martin Rejzek, Petr Novák, Marielle Vigouroux, Martin Vickers, Roland H M Wouters, Pirita Paajanen, Burkhard Steuernagel, Jonathan D Moore, Janet Higgins, David Swarbreck, Stefan Martens, Colin Y Kim, Jing-Ke Weng, Sagadevan Mundree, Benjamin Kilian, Shiv Kumar, Matthew William Loose, Levi Yant, Jiří Macas, Trevor L Wang, Cathie Martin, Peter Martin Ferdinand Emmrich
Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus. Nature communications 14 (1) (2023)
Anne Edwards, Isaac Njaci, Abhimanyu Sarkar, Zhouqian Jiang, Gemy George Kaithakottil, Christopher Moore, Jitender Cheema, Clare E M Stevenson, Martin Rejzek, Petr Novák, Marielle Vigouroux, Martin Vickers, Roland H M Wouters, Pirita Paajanen, Burkhard Steuernagel, Jonathan D Moore, Janet Higgins, David Swarbreck, Stefan Martens, Colin Y Kim, Jing-Ke Weng, Sagadevan Mundree, Benjamin Kilian, Shiv Kumar, Matthew William Loose, Levi Yant, Jiří Macas, Trevor L Wang, Cathie Martin, Peter Martin Ferdinand Emmrich
Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus. Nature communications 14 (1) (2023)
Anne Edwards, Isaac Njaci, Abhimanyu Sarkar, Zhouqian Jiang, Gemy George Kaithakottil, Christopher Moore, Jitender Cheema, Clare E M Stevenson, Martin Rejzek, Petr Novák, Marielle Vigouroux, Martin Vickers, Roland H M Wouters, Pirita Paajanen, Burkhard Steuernagel, Jonathan D Moore, Janet Higgins, David Swarbreck, Stefan Martens, Colin Y Kim, Jing-Ke Weng, Sagadevan Mundree, Benjamin Kilian, Shiv Kumar, Matthew William Loose, Levi Yant, Jiří Macas, Trevor L Wang, Cathie Martin, Peter Martin Ferdinand Emmrich
Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus. Nature communications 14 (1) (2023)
Anne Edwards, Isaac Njaci, Abhimanyu Sarkar, Zhouqian Jiang, Gemy George Kaithakottil, Christopher Moore, Jitender Cheema, Clare E M Stevenson, Martin Rejzek, Petr Novák, Marielle Vigouroux, Martin Vickers, Roland H M Wouters, Pirita Paajanen, Burkhard Steuernagel, Jonathan D Moore, Janet Higgins, David Swarbreck, Stefan Martens, Colin Y Kim, Jing-Ke Weng, Sagadevan Mundree, Benjamin Kilian, Shiv Kumar, Matthew William Loose, Levi Yant, Jiří Macas, Trevor L Wang, Cathie Martin, Peter Martin Ferdinand Emmrich
Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus. Nature communications 14 (1) (2023)
Jamie McGowan, Estelle S Kilias, Elisabet Alacid, James Lipscombe, Benjamin H Jenkins, Karim Gharbi, Gemy George Kaithakottil, Iain C Macaulay, Seanna McTaggart, Sally D Warring, Thomas A Richards, Neil Hall, David Swarbreck
Identification of a non-canonical ciliate nuclear genetic code where UAA and UAG code for different amino acids. PLoS genetics 19 (10) (2023)
Anne Edwards, Isaac Njaci, Abhimanyu Sarkar, Zhouqian Jiang, Gemy George Kaithakottil, Christopher Moore, Jitender Cheema, Clare E M Stevenson, Martin Rejzek, Petr Novák, Marielle Vigouroux, Martin Vickers, Roland H M Wouters, Pirita Paajanen, Burkhard Steuernagel, Jonathan D Moore, Janet Higgins, David Swarbreck, Stefan Martens, Colin Y Kim, Jing-Ke Weng, Sagadevan Mundree, Benjamin Kilian, Shiv Kumar, Matthew William Loose, Levi Yant, Jiří Macas, Trevor L Wang, Cathie Martin, Peter Martin Ferdinand Emmrich
Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus. Nature communications 14 (1) (2023)
Anne Edwards, Isaac Njaci, Abhimanyu Sarkar, Zhouqian Jiang, Gemy George Kaithakottil, Christopher Moore, Jitender Cheema, Clare E M Stevenson, Martin Rejzek, Petr Novák, Marielle Vigouroux, Martin Vickers, Roland H M Wouters, Pirita Paajanen, Burkhard Steuernagel, Jonathan D Moore, Janet Higgins, David Swarbreck, Stefan Martens, Colin Y Kim, Jing-Ke Weng, Sagadevan Mundree, Benjamin Kilian, Shiv Kumar, Matthew William Loose, Levi Yant, Jiří Macas, Trevor L Wang, Cathie Martin, Peter Martin Ferdinand Emmrich
Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus. Nature communications 14 (1) (2023)
Anne Edwards, Isaac Njaci, Abhimanyu Sarkar, Zhouqian Jiang, Gemy George Kaithakottil, Christopher Moore, Jitender Cheema, Clare E M Stevenson, Martin Rejzek, Petr Novák, Marielle Vigouroux, Martin Vickers, Roland H M Wouters, Pirita Paajanen, Burkhard Steuernagel, Jonathan D Moore, Janet Higgins, David Swarbreck, Stefan Martens, Colin Y Kim, Jing-Ke Weng, Sagadevan Mundree, Benjamin Kilian, Shiv Kumar, Matthew William Loose, Levi Yant, Jiří Macas, Trevor L Wang, Cathie Martin, Peter Martin Ferdinand Emmrich
Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus. Nature communications 14 (1) (2023)
Anne Edwards, Isaac Njaci, Abhimanyu Sarkar, Zhouqian Jiang, Gemy George Kaithakottil, Christopher Moore, Jitender Cheema, Clare E M Stevenson, Martin Rejzek, Petr Novák, Marielle Vigouroux, Martin Vickers, Roland H M Wouters, Pirita Paajanen, Burkhard Steuernagel, Jonathan D Moore, Janet Higgins, David Swarbreck, Stefan Martens, Colin Y Kim, Jing-Ke Weng, Sagadevan Mundree, Benjamin Kilian, Shiv Kumar, Matthew William Loose, Levi Yant, Jiří Macas, Trevor L Wang, Cathie Martin, Peter Martin Ferdinand Emmrich
Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus. Nature communications 14 (1) (2023)
Anne Edwards, Isaac Njaci, Abhimanyu Sarkar, Zhouqian Jiang, Gemy George Kaithakottil, Christopher Moore, Jitender Cheema, Clare E M Stevenson, Martin Rejzek, Petr Novák, Marielle Vigouroux, Martin Vickers, Roland H M Wouters, Pirita Paajanen, Burkhard Steuernagel, Jonathan D Moore, Janet Higgins, David Swarbreck, Stefan Martens, Colin Y Kim, Jing-Ke Weng, Sagadevan Mundree, Benjamin Kilian, Shiv Kumar, Matthew William Loose, Levi Yant, Jiří Macas, Trevor L Wang, Cathie Martin, Peter Martin Ferdinand Emmrich
Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus. Nature communications 14 (1) (2023)
Anne Edwards, Isaac Njaci, Abhimanyu Sarkar, Zhouqian Jiang, Gemy George Kaithakottil, Christopher Moore, Jitender Cheema, Clare E M Stevenson, Martin Rejzek, Petr Novák, Marielle Vigouroux, Martin Vickers, Roland H M Wouters, Pirita Paajanen, Burkhard Steuernagel, Jonathan D Moore, Janet Higgins, David Swarbreck, Stefan Martens, Colin Y Kim, Jing-Ke Weng, Sagadevan Mundree, Benjamin Kilian, Shiv Kumar, Matthew William Loose, Levi Yant, Jiří Macas, Trevor L Wang, Cathie Martin, Peter Martin Ferdinand Emmrich
Author Correction: Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus. Nature communications 14 (1) (2023)
Mara K N Lawniczak, Richard Durbin, Paul Flicek, Kerstin Lindblad-Toh, Xiaofeng Wei, John M Archibald, William J Baker, Katherine Belov, Mark L Blaxter, Tomas Marques-Bonet, Anna K Childers, Jonathan A Coddington, Keith A Crandall, Andrew J Crawford, Robert P Davey, Federica Di Palma, Qi Fang, Wilfried Haerty, Neil Hall, Katharina J Hoff, Kerstin Howe, Erich D Jarvis, Warren E Johnson, Rebecca N Johnson, Paul Julian Kersey, Xin Liu, Jose Victor Lopez, Eugene W Myers, Olga Vinnere Pettersson, Adam M Phillippy, Monica F Poelchau, Kim D Pruitt, Arang Rhie, Juan Carlos Castilla-Rubio, Sunil Kumar Sahu, Nicholas A Salmon, Pamela S Soltis, David Swarbreck, Françoise Thibaud-Nissen, Sibo Wang, Jill L Wegrzyn, Guo-Jie Zhang, He Zhang, Harris A Lewin, Stephen Richards
Standards recommendations for the Earth BioGenome Project. Proceedings of the National Academy of Sciences of the United States of America 119 (4) (2022)
M Timothy Rabanus-Wallace, Bernd Hackauf, Martin Mascher, Thomas M Lux, Thomas Wicker, Heidrun Gundlach, Mariana Baez, Anastassia Boudichevskaia, Klaus F X Mayer, Liangliang Gao, Jesse A Poland, Curtis J Pozniak, Sean Walkowiak, Joanna Melonek, Coraline R Praz, Mona Schreiber, Hikmet Budak, Matthias Heuberger, Burkhard Steuernagel, Brande B H Wulff, Andreas Börner, Brook Byrns, Jana Čížková, D Brian Fowler, Allan Fritz, Axel Himmelbach, Gemy Kaithakottil, Jens Keilwagen, Beat Keller, David Konkin, Jamie Larsen, Qiang Li, Beata Myśków, Sudharsan Padmarasu, Nidhi Rawat, Uğur Sesiz, Sezgi Biyiklioglu-Kaya, Andrew G Sharpe, Hana Šimková, Ian D Small, David Swarbreck, Helena Toegelová, Natalia V Tsvetkova, Anatoly V Voylokov, Jan Vrána, Eva Bauer, Hanna Bolibok-Bragoszewska, Jaroslav Dolezel, Anthony J W Hall, Jizeng Jia, Viktor Korzun, André Laroche, Xue-Feng Ma, Frank Ordon, Hakan Ozkan, Monika Rakoczy-Trojanowska, Uwe Scholz, Alan H Schulman, Dörthe Siekmann, Stefan Stojałowski, Vijay K Tiwari, Manuel Spannagl, Nils Stein
Chromosome-scale genome assembly provides insights into rye biology, evolution and agronomic potential. Nature genetics 53 (4) (2021)
Thomas C Mathers, Sam T Mugford, Lawrence Percival-Alwyn, Yazhou Chen, Gemy George Kaithakottil, David Swarbreck, Saskia A Hogenhout, Cock Van Oosterhout
Sex-specific changes in the aphid DNA methylation landscape. Molecular ecology 28 (18) (2019)
Bernardo J Clavijo, Luca Venturini, Christian Schudoma, Gonzalo Garcia Accinelli, Gemy George Kaithakottil, Jonathan Wright, Philippa Borrill, George Kettleborough, Darren Heavens, Helen Chapman, James Lipscombe, Tom Barker, Fu-Hao Lu, Neil McKenzie, Dina Raats, Ricardo Humberto Ramirez-Gonzalez, Aurore Coince, Ned Peel, Lawrence Percival-Alwyn, Owen Duncan, Josua Trösch, Guotai Yu, Dan M Bolser, Guy Namaati, Arnaud Kerhornou, Manuel Spannagl, Heidrun Gundlach, Georg Haberer, Robert P Davey, Christine Fosker, Federica Di Palma, Andrew L Phillips, A Harvey Millar, Paul Julian Kersey, Cristobal Uauy, Ksenia V Krasileva, David Swarbreck, Michael W Bevan, Matthew D Clark
An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations. Genome research 27 (5) (2018)

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Publication Activity (10 Years)

Top Topics

Top Venues

David Swarbreck