Feiqiao Brian Yu (Feiqiao B Yu)

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 24

Top Venues

Proceedings of the National Academy of Sciences of the United States of America

bioRxiv : the preprint server for biology

Bioinformatics (Oxford, England)

Science (New York, N.Y.)

CZ Biohub

Stanford University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

CZ Biohub Oct 20 2017

United States

Scientist :: Microbiome Initiative

Stanford University Jan 12 2017 - Oct 19 2017

United States

Post Doctoral Scholar :: Bioengineering

Education History

Stanford University Mar 14 2011 - Jan 12 2017

United States

PHD :: Electrical Engineering

Stanford University Sep 25 2010 - Jun 12 2012

United States

MSC :: Electrical Engineering

California Institute of Technology Sep 21 2006 - Jun 13 2010

United States

BSC :: Electrical Engineering

Publications

Kristen D Curry, Feiqiao Brian Yu, Summer E Vance, Santiago Segarra, Devaki Bhaya, Rayan Chikhi, Eduardo P C Rocha, Todd J Treangen
Reference-free Structural Variant Detection in Microbiomes via Long-read Coassembly Graphs. bioRxiv : the preprint server for biology (2024)
Kristen D Curry, Feiqiao Brian Yu, Summer E Vance, Santiago Segarra, Devaki Bhaya, Rayan Chikhi, Eduardo P C Rocha, Todd J Treangen
Reference-free structural variant detection in microbiomes via long-read co-assembly graphs. Bioinformatics (Oxford, England) 40 (Supplement_1) (2024)
Kristen D Curry, Feiqiao Brian Yu, Summer E Vance, Santiago Segarra, Devaki Bhaya, Rayan Chikhi, Eduardo P C Rocha, Todd J Treangen
Reference-free structural variant detection in microbiomes via long-read co-assembly graphs. Bioinformatics (Oxford, England) 40 (Supplement_1) (2024)
Kristen D Curry, Feiqiao Brian Yu, Summer E Vance, Santiago Segarra, Devaki Bhaya, Rayan Chikhi, Eduardo P C Rocha, Todd J Treangen
Reference-free structural variant detection in microbiomes via long-read co-assembly graphs. Bioinformatics (Oxford, England) 40 (Supplement_1) (2024)
Kristen D Curry, Feiqiao Brian Yu, Summer E Vance, Santiago Segarra, Devaki Bhaya, Rayan Chikhi, Eduardo P C Rocha, Todd J Treangen
Reference-free structural variant detection in microbiomes via long-read co-assembly graphs. Bioinformatics (Oxford, England) 40 (Supplement_1) (2024)
Kristen D Curry, Feiqiao Brian Yu, Summer E Vance, Santiago Segarra, Devaki Bhaya, Rayan Chikhi, Eduardo P C Rocha, Todd J Treangen
Reference-free Structural Variant Detection in Microbiomes via Long-read Coassembly Graphs. bioRxiv : the preprint server for biology (2024)
Kristen D Curry, Feiqiao Brian Yu, Summer E Vance, Santiago Segarra, Devaki Bhaya, Rayan Chikhi, Eduardo P C Rocha, Todd J Treangen
Reference-free Structural Variant Detection in Microbiomes via Long-read Coassembly Graphs. bioRxiv : the preprint server for biology (2024)
Songnan Wang, Volker Böhnert, Alby J Joseph, Valentino Sudaryo, Gemini Skariah, Jason T Swinderman, Feiqiao Brian Yu, Vishvak Subramanyam, Denise M Wolf, Xuchao Lyu, Luke A Gilbert, Laura J Van't Veer, Hani Goodarzi, Lingyin Li
ENPP1 is an innate immune checkpoint of the anticancer cGAMP-STING pathway in breast cancer. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Songnan Wang, Volker Böhnert, Alby J Joseph, Valentino Sudaryo, Gemini Skariah, Jason T Swinderman, Feiqiao Brian Yu, Vishvak Subramanyam, Denise M Wolf, Xuchao Lyu, Luke A Gilbert, Laura J Van't Veer, Hani Goodarzi, Lingyin Li
ENPP1 is an innate immune checkpoint of the anticancer cGAMP-STING pathway in breast cancer. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Songnan Wang, Volker Böhnert, Alby J Joseph, Valentino Sudaryo, Gemini Skariah, Jason T Swinderman, Feiqiao Brian Yu, Vishvak Subramanyam, Denise M Wolf, Xuchao Lyu, Luke A Gilbert, Laura J Van't Veer, Hani Goodarzi, Lingyin Li
ENPP1 is an innate immune checkpoint of the anticancer cGAMP-STING pathway in breast cancer. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Songnan Wang, Volker Böhnert, Alby J Joseph, Valentino Sudaryo, Gemini Skariah, Jason T Swinderman, Feiqiao Brian Yu, Vishvak Subramanyam, Denise M Wolf, Xuchao Lyu, Luke A Gilbert, Laura J Van't Veer, Hani Goodarzi, Lingyin Li
ENPP1 is an innate immune checkpoint of the anticancer cGAMP-STING pathway in breast cancer. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Songnan Wang, Volker Böhnert, Alby J Joseph, Valentino Sudaryo, Gemini Skariah, Jason T Swinderman, Feiqiao Brian Yu, Vishvak Subramanyam, Denise M Wolf, Xuchao Lyu, Luke A Gilbert, Laura J Van't Veer, Hani Goodarzi, Lingyin Li
ENPP1 is an innate immune checkpoint of the anticancer cGAMP-STING pathway in breast cancer. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Songnan Wang, Volker Böhnert, Alby J Joseph, Valentino Sudaryo, Gemini Skariah, Jason T Swinderman, Feiqiao Brian Yu, Vishvak Subramanyam, Denise M Wolf, Xuchao Lyu, Luke A Gilbert, Laura J Van't Veer, Hani Goodarzi, Lingyin Li
ENPP1 is an innate immune checkpoint of the anticancer cGAMP-STING pathway in breast cancer. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Katherine S Xue, Sophie Jean Walton, Doran A Goldman, Maike L Morrison, Adrian J Verster, Autumn B Parrott, Feiqiao Brian Yu, Norma F Neff, Noah A Rosenberg, Benjamin D Ross, Dmitri A Petrov, Kerwyn Casey Huang, Benjamin H Good, David A Relman
Prolonged delays in human microbiota transmission after a controlled antibiotic perturbation. bioRxiv : the preprint server for biology (2023)
Xiaofan Jin, Feiqiao Brian Yu, Jia Yan, Allison M Weakley, Veronika Dubinkina, Xiandong Meng, Katherine S Pollard
Culturing of a complex gut microbial community in mucin-hydrogel carriers reveals strain- and gene-associated spatial organization. Nature communications 14 (1) (2023)
Songnan Wang, Volker Böhnert, Alby J Joseph, Valentino Sudaryo, Gemini Skariah, Jason T Swinderman, Feiqiao Brian Yu, Vishvak Subramanyam, Denise M Wolf, Xuchao Lyu, Luke A Gilbert, Laura J Van't Veer, Hani Goodarzi, Lingyin Li
ENPP1 is an innate immune checkpoint of the anticancer cGAMP-STING pathway in breast cancer. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Songnan Wang, Volker Böhnert, Alby J Joseph, Valentino Sudaryo, Gemini Skariah, Jason T Swinderman, Feiqiao Brian Yu, Vishvak Subramanyam, Denise M Wolf, Xuchao Lyu, Luke A Gilbert, Laura J Van't Veer, Hani Goodarzi, Lingyin Li
ENPP1 is an innate immune checkpoint of the anticancer cGAMP-STING pathway in breast cancer. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Daan R Speth, Feiqiao Brian Yu, Stephanie A Connon, Sujung Lim, John S Magyar, Manet E Peña-Salinas, Stephen R Quake, Victoria J Orphan
Microbial communities of Auka hydrothermal sediments shed light on vent biogeography and the evolutionary history of thermophily. The ISME journal 16 (7) (2022)
Erin Oi-Yan Wong, Emma Joan Elizabeth Brownlie, Katharine Michelle Ng, Sornnujah Kathirgamanathan, Feiqiao Brian Yu, Bryan D Merrill, Kerwyn Casey Huang, Alberto Martin, Carolina Tropini, William Wiley Navarre
The CIAMIB: a Large and Metabolically Diverse Collection of Inflammation-Associated Bacteria from the Murine Gut. mBio 13 (2) (2022)
Matthew R Olm, Dylan Dahan, Matthew M Carter, Bryan D Merrill, Feiqiao Brian Yu, Sunit Jain, Xiandong Meng, Surya Tripathi, Hannah Wastyk, Norma Neff, Susan P Holmes, Erica D Sonnenburg, Aashish R Jha, Justin L Sonnenburg
Robust variation in infant gut microbiome assembly across a spectrum of lifestyles. Science (New York, N.Y.) 376 (6598) (2022)
Gunsagar Singh Gulati, Shaheen S Sikandar, Daniel J Wesche, Anoop Manjunath, Anjan Bharadwaj, Mark J Berger, Francisco Ilagan, Angera H Kuo, Robert W Hsieh, Shang Cai, Maider Zabala, Ferenc A Scheeren, Neethan A Lobo, Dalong Qian, Feiqiao Brian Yu, Frederick M Dirbas, Michael F Clarke, Aaron M Newman
Single-cell transcriptional diversity is a hallmark of developmental potential. Science (New York, N.Y.) 367 (6476) (2020)
Jonathan Deaton, Feiqiao Brian Yu, Stephen R Quake
Mini-Metagenomics and Nucleotide Composition Aid the Identification and Host Association of Novel Bacteriophage Sequences. Advanced biosystems 3 (11) (2019)
Bojk A Berghuis, Feiqiao Brian Yu, Frederik Schulz, Paul C Blainey, Tanja Woyke, Stephen R Quake
Hydrogenotrophic methanogenesis in archaeal phylum Verstraetearchaeota reveals the shared ancestry of all methanogens. Proceedings of the National Academy of Sciences of the United States of America 116 (11) (2019)
Feiqiao Brian Yu, Paul C Blainey, Frederik Schulz, Tanja Woyke, Mark A Horowitz, Stephen R Quake
Microfluidic-based mini-metagenomics enables discovery of novel microbial lineages from complex environmental samples. eLife 6 (2017)

Feiqiao Brian Yu (Feiqiao B Yu)

Publication Activity (10 Years)

Top Topics

Top Venues