Paul C Blainey

Scopus Author ID Scopus Author ID Scopus Author ID Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 58

Top Topics

Machine Learning

Top Venues

bioRxiv : the preprint server for biology

Science advances

Proceedings of the National Academy of Sciences of the United States of America

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Matteo Gentili, Rebecca J Carlson, Bingxu Liu, Quentin Hellier, Jocelyn Andrews, Yue Qin, Paul C Blainey, Nir Hacohen
Classification and functional characterization of regulators of intracellular STING trafficking identified by genome-wide optical pooled screening. bioRxiv : the preprint server for biology (2024)
Megan W Tse, Meilin Zhu, Benjamin Peters, Efrat Hamami, Julie Chen, Kathleen P Davis, Samuel Nitz, Juliane Weller, Thulasi Warrier, Diana K Hunt, Yoelkys Morales, Tomohiko Kawate, Jeffrey L Gaulin, Jon H Come, Juan Hernandez-Bird, Wenwen Huo, Isabelle Neisewander, Laura L Kiessling, Deborah T Hung, Bree B Aldridge, Ralph R Isberg, Paul C Blainey
Massively parallel combination screen reveals small molecule sensitization of antibiotic-resistant Gram-negative ESKAPE pathogens. bioRxiv : the preprint server for biology (2024)
Alexandra J Poret, Matthew M Schaefers, Christina Merakou, Kathryn E Mansour, Georgia K Lagoudas, Ashley R Cross, Joanna B Goldberg, Roy Kishony, Ahmet Z Uluer, Alexander J McAdam, Paul C Blainey, Sara O Vargas, Tami D Lieberman, Gregory P Priebe
De novo mutations mediate phenotypic switching in an opportunistic human lung pathogen. bioRxiv : the preprint server for biology (2024)
Rebecca J Carlson, J J Patten, George Stefanakis, Brian Y Soong, Adityanarayanan Radhakrishnan, Avtar Singh, Naveen Thakur, Gaya K Amarasinghe, Nir Hacohen, Christopher F Basler, Daisy W Leung, Caroline Uhler, Robert A Davey, Paul C Blainey
Single-cell image-based genetic screens systematically identify regulators of Ebola virus subcellular infection dynamics. bioRxiv : the preprint server for biology (2024)
Matteo Gentili, Rebecca J Carlson, Bingxu Liu, Quentin Hellier, Jocelyn Andrews, Yue Qin, Paul C Blainey, Nir Hacohen
Classification and functional characterization of regulators of intracellular STING trafficking identified by genome-wide optical pooled screening. bioRxiv : the preprint server for biology (2024)
Megan W Tse, Meilin Zhu, Benjamin Peters, Efrat Hamami, Julie Chen, Kathleen P Davis, Samuel Nitz, Juliane Weller, Thulasi Warrier, Diana K Hunt, Yoelkys Morales, Tomohiko Kawate, Jeffrey L Gaulin, Jon H Come, Juan Hernandez-Bird, Wenwen Huo, Isabelle Neisewander, Laura L Kiessling, Deborah T Hung, Bree B Aldridge, Ralph R Isberg, Paul C Blainey
Massively parallel combination screen reveals small molecule sensitization of antibiotic-resistant Gram-negative ESKAPE pathogens. bioRxiv : the preprint server for biology (2024)
Russell T Walton, Yue Qin, Paul C Blainey
CROPseq-multi: a versatile solution for multiplexed perturbation and decoding in pooled CRISPR screens. bioRxiv : the preprint server for biology (2024)
Rebecca J Carlson, J J Patten, George Stefanakis, Brian Y Soong, Adityanarayanan Radhakrishnan, Avtar Singh, Naveen Thakur, Gaya K Amarasinghe, Nir Hacohen, Christopher F Basler, Daisy W Leung, Caroline Uhler, Robert A Davey, Paul C Blainey
Single-cell image-based genetic screens systematically identify regulators of Ebola virus subcellular infection dynamics. bioRxiv : the preprint server for biology (2024)
Megan W Tse, Meilin Zhu, Benjamin Peters, Efrat Hamami, Julie Chen, Kathleen P Davis, Samuel Nitz, Juliane Weller, Thulasi Warrier, Diana K Hunt, Yoelkys Morales, Tomohiko Kawate, Jeffrey L Gaulin, Jon H Come, Juan Hernandez-Bird, Wenwen Huo, Isabelle Neisewander, Laura L Kiessling, Deborah T Hung, Joan Mecsas, Bree B Aldridge, Ralph R Isberg, Paul C Blainey
Massively parallel combination screen reveals small molecule sensitization of antibiotic-resistant Gram-negative ESKAPE pathogens. bioRxiv : the preprint server for biology (2024)
Rebecca J Carlson, J J Patten, George Stefanakis, Brian Y Soong, Adityanarayanan Radhakrishnan, Avtar Singh, Naveen Thakur, Gaya K Amarasinghe, Nir Hacohen, Christopher F Basler, Daisy W Leung, Caroline Uhler, Robert A Davey, Paul C Blainey
Single-cell image-based genetic screens systematically identify regulators of Ebola virus subcellular infection dynamics. bioRxiv : the preprint server for biology (2024)
Russell T Walton, Yue Qin, Paul C Blainey
CROPseq-multi: a versatile solution for multiplexed perturbation and decoding in pooled CRISPR screens. bioRxiv : the preprint server for biology (2024)
Alexandra J Poret, Matthew M Schaefers, Christina Merakou, Kathryn E Mansour, Georgia K Lagoudas, Ashley R Cross, Joanna B Goldberg, Roy Kishony, Ahmet Z Uluer, Alexander J McAdam, Paul C Blainey, Sara O Vargas, Tami D Lieberman, Gregory P Priebe
De novo mutations mediate phenotypic switching in an opportunistic human lung pathogen. bioRxiv : the preprint server for biology (2024)
Alexandra J Poret, Matthew M Schaefers, Christina Merakou, Kathryn E Mansour, Georgia K Lagoudas, Ashley R Cross, Joanna B Goldberg, Roy Kishony, Ahmet Z Uluer, Alexander J McAdam, Paul C Blainey, Sara O Vargas, Tami D Lieberman, Gregory P Priebe
De novo mutations mediate phenotypic switching in an opportunistic human lung pathogen. bioRxiv : the preprint server for biology (2024)
Rebecca J Carlson, J J Patten, George Stefanakis, Brian Y Soong, Adityanarayanan Radhakrishnan, Avtar Singh, Naveen Thakur, Gaya K Amarasinghe, Nir Hacohen, Christopher F Basler, Daisy W Leung, Caroline Uhler, Robert A Davey, Paul C Blainey
Single-cell image-based genetic screens systematically identify regulators of Ebola virus subcellular infection dynamics. bioRxiv : the preprint server for biology (2024)
Miguel Reyes, Samantha M Leff, Matteo Gentili, Nir Hacohen, Paul C Blainey
Microscale combinatorial stimulation of human myeloid cells reveals inflammatory priming by viral ligands. Science advances 9 (8) (2023)
Nicole L Welch, Meilin Zhu, Catherine Hua, Juliane Weller, Marzieh Ezzaty Mirhashemi, Tien G Nguyen, Sreekar Mantena, Matthew R Bauer, Bennett M Shaw, Cheri M Ackerman, Sri Gowtham Thakku, Megan W Tse, Jared Kehe, Marie-Martine Uwera, Jacqueline S Eversley, Derek A Bielwaski, Graham McGrath, Joseph Braidt, Jeremy Johnson, Felecia Cerrato, Gage K Moreno, Lydia A Krasilnikova, Brittany A Petros, Gabrielle L Gionet, Ewa King, Richard C Huard, Samantha K Jalbert, Michael L Cleary, Nicholas A Fitzgerald, Stacey B Gabriel, Glen R Gallagher, Sandra C Smole, Lawrence C Madoff, Catherine M Brown, Matthew W Keller, Malania M Wilson, Marie K Kirby, John R Barnes, Daniel J Park, Katherine J Siddle, Christian T Happi, Deborah T Hung, Michael Springer, Bronwyn L MacInnis, Jacob E Lemieux, Eric Rosenberg, John A Branda, Paul C Blainey, Pardis C Sabeti, Cameron A Myhrvold
Author Correction: Multiplexed CRISPR-based microfluidic platform for clinical testing of respiratory viruses and identification of SARS-CoV-2 variants. Nature medicine (2023)
Meilin Zhu, Matthew W Frank, Christopher D Radka, Sarah Jeanfavre, Megan W Tse, Julian Avila Pacheco, Kerry Pierce, Amy Deik, Jiawu Xu, Salina Hussain, Fatima Aysha Hussain, Nondumiso Xulu, Nasreen Khan, Vanessa Pillay, Krista L Dong, Thumbi Ndung'u, Andrew T Chan, Charles O Rock, Paul C Blainey, Seth M Bloom, Douglas S Kwon
Vaginal Lactobacillus fatty acid response mechanisms reveal a novel strategy for bacterial vaginosis treatment. bioRxiv : the preprint server for biology (2023)
Meilin Zhu, Matthew W Frank, Christopher D Radka, Sarah Jeanfavre, Megan W Tse, Julian Avila Pacheco, Kerry Pierce, Amy Deik, Jiawu Xu, Salina Hussain, Fatima Aysha Hussain, Nondumiso Xulu, Nasreen Khan, Vanessa Pillay, Krista L Dong, Thumbi Ndung'u, Andrew T Chan, Charles O Rock, Paul C Blainey, Seth M Bloom, Douglas S Kwon
Vaginal Lactobacillus fatty acid response mechanisms reveal a novel strategy for bacterial vaginosis treatment. bioRxiv : the preprint server for biology (2023)
Meilin Zhu, Matthew W Frank, Christopher D Radka, Sarah Jeanfavre, Megan W Tse, Julian Avila Pacheco, Kerry Pierce, Amy Deik, Jiawu Xu, Salina Hussain, Fatima Aysha Hussain, Nondumiso Xulu, Nasreen Khan, Vanessa Pillay, Krista L Dong, Thumbi Ndung'u, Andrew T Chan, Charles O Rock, Paul C Blainey, Seth M Bloom, Douglas S Kwon
Vaginal Lactobacillus fatty acid response mechanisms reveal a novel strategy for bacterial vaginosis treatment. bioRxiv : the preprint server for biology (2023)
Jacob Borrajo, Kamyab Javanmardi, James Griffin, Susan J St Martin, David Yao, Kaisle A Hill, Paul C Blainey, Basem Al-Shayeb
Programmable multi-kilobase RNA editing using CRISPR-mediated trans-splicing. bioRxiv : the preprint server for biology (2023)
Meilin Zhu, Matthew W Frank, Christopher D Radka, Sarah Jeanfavre, Megan W Tse, Julian Avila Pacheco, Kerry Pierce, Amy Deik, Jiawu Xu, Salina Hussain, Fatima Aysha Hussain, Nondumiso Xulu, Nasreen Khan, Vanessa Pillay, Krista L Dong, Thumbi Ndung'u, Andrew T Chan, Charles O Rock, Paul C Blainey, Seth M Bloom, Douglas S Kwon
Vaginal Lactobacillus fatty acid response mechanisms reveal a novel strategy for bacterial vaginosis treatment. bioRxiv : the preprint server for biology (2023)
Meraj Ramezani, Julia R Bauman, Avtar Singh, Erin Weisbart, John Yong, Maria Lozada, Gregory P Way, Sanam L Kavari, Celeste Diaz, Marzieh Haghighi, Thiago Martins Batista, Joaquín Pérez-Schindler, Melina Claussnitzer, Shantanu Singh, Beth A Cimini, Paul C Blainey, Anne E Carpenter, Calvin H Jan, James T Neal
A genome-wide atlas of human cell morphology. bioRxiv : the preprint server for biology (2023)
Meilin Zhu, Matthew W Frank, Christopher D Radka, Sarah Jeanfavre, Megan W Tse, Julian Avila Pacheco, Kerry Pierce, Amy Deik, Jiawu Xu, Salina Hussain, Fatima Aysha Hussain, Nondumiso Xulu, Nasreen Khan, Vanessa Pillay, Krista L Dong, Thumbi Ndung'u, Andrew T Chan, Charles O Rock, Paul C Blainey, Seth M Bloom, Douglas S Kwon
Vaginal Lactobacillus fatty acid response mechanisms reveal a novel strategy for bacterial vaginosis treatment. bioRxiv : the preprint server for biology (2023)
Benjamin E Mead, Conner Kummerlowe, Nuo Liu, Walaa E Kattan, Thomas Cheng, Jaime H Cheah, Christian K Soule, Josh Peters, Kristen E Lowder, Paul C Blainey, William C Hahn, Brian Cleary, Bryan D Bryson, Peter S Winter, Srivatsan Raghavan, Alex K Shalek
Compressed phenotypic screens for complex multicellular models and high-content assays. bioRxiv : the preprint server for biology (2023)
Benjamin E Mead, Conner Kummerlowe, Nuo Liu, Walaa E Kattan, Thomas Cheng, Jaime H Cheah, Christian K Soule, Josh Peters, Kristen E Lowder, Paul C Blainey, William C Hahn, Brian Cleary, Bryan D Bryson, Peter S Winter, Srivatsan Raghavan, Alex K Shalek
Compressed phenotypic screens for complex multicellular models and high-content assays. bioRxiv : the preprint server for biology (2023)
Rebecca J Carlson, Michael D Leiken, Alina Guna, Nir Hacohen, Paul C Blainey
A genome-wide optical pooled screen reveals regulators of cellular antiviral responses. Proceedings of the National Academy of Sciences of the United States of America 120 (16) (2023)
Benjamin E Mead, Conner Kummerlowe, Nuo Liu, Walaa E Kattan, Thomas Cheng, Jaime H Cheah, Christian K Soule, Josh Peters, Kristen E Lowder, Paul C Blainey, William C Hahn, Brian Cleary, Bryan D Bryson, Peter S Winter, Srivatsan Raghavan, Alex K Shalek
Compressed phenotypic screens for complex multicellular models and high-content assays. bioRxiv : the preprint server for biology (2023)
Miguel Reyes, Samantha M Leff, Matteo Gentili, Nir Hacohen, Paul C Blainey
Microscale combinatorial stimulation of human myeloid cells reveals inflammatory priming by viral ligands. Science advances 9 (8) (2023)
Meilin Zhu, Matthew W Frank, Christopher D Radka, Sarah Jeanfavre, Megan W Tse, Julian Avila Pacheco, Kerry Pierce, Amy Deik, Jiawu Xu, Salina Hussain, Fatima Aysha Hussain, Nondumiso Xulu, Nasreen Khan, Vanessa Pillay, Krista L Dong, Thumbi Ndung'u, Andrew T Chan, Charles O Rock, Paul C Blainey, Seth M Bloom, Douglas S Kwon
Vaginal Lactobacillus fatty acid response mechanisms reveal a novel strategy for bacterial vaginosis treatment. bioRxiv : the preprint server for biology (2023)
Benjamin E Mead, Conner Kummerlowe, Nuo Liu, Walaa E Kattan, Thomas Cheng, Jaime H Cheah, Christian K Soule, Josh Peters, Kristen E Lowder, Paul C Blainey, William C Hahn, Brian Cleary, Bryan D Bryson, Peter S Winter, Srivatsan Raghavan, Alex K Shalek
Compressed phenotypic screens for complex multicellular models and high-content assays. bioRxiv : the preprint server for biology (2023)
Sri Gowtham Thakku, Jackson Lirette, Kanagavel Murugesan, Julie Chen, Grant Theron, Niaz Banaei, Paul C Blainey, James Gomez, Sharon Y Wong, Deborah T Hung
Genome-wide tiled detection of circulating Mycobacterium tuberculosis cell-free DNA using Cas13. Nature communications 14 (1) (2023)
Miguel Reyes, Samantha M Leff, Matteo Gentili, Nir Hacohen, Paul C Blainey
Microscale combinatorial stimulation of human myeloid cells reveals inflammatory priming by viral ligands. Science advances 9 (8) (2023)
Aziz M Al'Khafaji, Jonathan T Smith, Kiran V Garimella, Mehrtash Babadi, Victoria Popic, Moshe Sade-Feldman, Michael Gatzen, Siranush Sarkizova, Marc A Schwartz, Emily M Blaum, Allyson Day, Maura Costello, Tera Bowers, Stacey Gabriel, Eric Banks, Anthony A Philippakis, Genevieve M Boland, Paul C Blainey, Nir Hacohen
High-throughput RNA isoform sequencing using programmed cDNA concatenation. Nature biotechnology (2023)
Sri Gowtham Thakku, Jackson Lirette, Kanagavel Murugesan, Julie Chen, Grant Theron, Niaz Banaei, Paul C Blainey, James Gomez, Sharon Y Wong, Deborah T Hung
Genome-wide tiled detection of circulating Mycobacterium tuberculosis cell-free DNA using Cas13. Nature communications 14 (1) (2023)
Miguel Reyes, Samantha M Leff, Matteo Gentili, Nir Hacohen, Paul C Blainey
Microscale combinatorial stimulation of human myeloid cells reveals inflammatory priming by viral ligands. Science advances 9 (8) (2023)
Sri Gowtham Thakku, Jackson Lirette, Kanagavel Murugesan, Julie Chen, Grant Theron, Niaz Banaei, Paul C Blainey, James Gomez, Sharon Y Wong, Deborah T Hung
Genome-wide tiled detection of circulating Mycobacterium tuberculosis cell-free DNA using Cas13. Nature communications 14 (1) (2023)
Bingxu Liu, Rebecca J Carlson, Ivan S Pires, Matteo Gentili, Ellie Feng, Quentin Hellier, Marc Andre Schwartz, Paul C Blainey, Darrell J Irvine, Nir Hacohen
Human STING is a proton channel. Science (New York, N.Y.) 381 (6657) (2023)
Hayden C Metsky, Nicole L Welch, Priya P Pillai, Nicholas J Haradhvala, Laurie Rumker, Sreekar Mantena, Benjamin Zhang, David K Yang, Cheri M Ackerman, Juliane Weller, Paul C Blainey, Cameron Myhrvold, Michael Mitzenmacher, Pardis C Sabeti
Designing sensitive viral diagnostics with machine learning. Nature biotechnology 40 (7) (2022)
Sri Gowtham Thakku, Cheri M Ackerman, Cameron Myhrvold, Roby P Bhattacharyya, Jonathan Livny, Peijun Ma, Giselle Isabella Gomez, Pardis C Sabeti, Paul C Blainey, Deborah T Hung
Multiplexed detection of bacterial nucleic acids using Cas13 in droplet microarrays. PNAS nexus 1 (1) (2022)
David Feldman, Luke Funk, Anna Le, Rebecca J Carlson, Michael D Leiken, FuNien Tsai, Brian Y Soong, Avtar Singh, Paul C Blainey
Pooled genetic perturbation screens with image-based phenotypes. Nature protocols 17 (2) (2022)
Kathleen A Quan, Mohamad R Abdul Sater, Cherry Uy, Robin Clifton-Koeppel, Linda L Dickey, William Wilson, Pat Patton, Wayne Chang, Pamela Samuelson, Georgia K Lagoudas, Teri Allen, Lenny Merchant, Rick Gannotta, Cassiana E Bittencourt, J C Soto, Kaye D Evans, Paul C Blainey, John Murray, Dawn Shelton, Helen S Lee, Matthew Zahn, Julia Wolfe, Keith Madey, Jennifer Yim, Shruti K Gohil, Yonatan Hagai Grad, Susan S Huang
Epidemiology and genomics of a slow outbreak of methicillin-resistant Staphyloccus aureus (MRSA) in a neonatal intensive care unit: Successful chronic decolonization of MRSA-positive healthcare personnel. Infection control and hospital epidemiology (2022)
Russell T Walton, Avtar Singh, Paul C Blainey
Pooled genetic screens with image-based profiling. Molecular systems biology 18 (11) (2022)
Nicole L Welch, Meilin Zhu, Catherine Hua, Juliane Weller, Marzieh Ezzaty Mirhashemi, Tien G Nguyen, Sreekar Mantena, Matthew R Bauer, Bennett M Shaw, Cheri M Ackerman, Sri Gowtham Thakku, Megan W Tse, Jared Kehe, Marie-Martine Uwera, Jacqueline S Eversley, Derek A Bielwaski, Graham McGrath, Joseph Braidt, Jeremy Johnson, Felecia Cerrato, Gage K Moreno, Lydia A Krasilnikova, Brittany A Petros, Gabrielle L Gionet, Ewa King, Richard C Huard, Samantha K Jalbert, Michael L Cleary, Nicholas A Fitzgerald, Stacey B Gabriel, Glen R Gallagher, Sandra C Smole, Lawrence C Madoff, Catherine M Brown, Matthew W Keller, Malania M Wilson, Marie K Kirby, John R Barnes, Daniel J Park, Katherine J Siddle, Christian T Happi, Deborah T Hung, Michael Springer, Bronwyn L MacInnis, Jacob E Lemieux, Eric Rosenberg, John A Branda, Paul C Blainey, Pardis C Sabeti, Cameron A Myhrvold
Multiplexed CRISPR-based microfluidic platform for clinical testing of respiratory viruses and identification of SARS-CoV-2 variants. Nature medicine 28 (5) (2022)
Jared Kehe, Anthony Ortiz, Anthony Kulesa, Jeff Gore, Paul C Blainey, Jonathan Friedman
Positive interactions are common among culturable bacteria. Science advances 7 (45) (2021)
Miguel Reyes, Michael R Filbin, Roby P Bhattacharyya, Abraham Sonny, Arnav Mehta, Kianna Billman, Kyle R Kays, Mayra Pinilla-Vera, Maura E Benson, Lisa A Cosimi, Deborah T Hung, Bruce David Levy, Alexandra-Chloé Villani, Moshe Sade-Feldman, Rebecca M Baron, Marcia B Goldberg, Paul C Blainey, Nir Hacohen
Plasma from patients with bacterial sepsis or severe COVID-19 induces suppressive myeloid cell production from hematopoietic progenitors in vitro. Science translational medicine 13 (598) (2021)
Cheri M Ackerman, Cameron A Myhrvold, Sri Gowtham Thakku, Catherine A Freije, Hayden C Metsky, David K Yang, Simon H Ye, Chloe K Boehm, Tinna-Sólveig F Kosoko-Thoroddsen, Jared Kehe, Tien G Nguyen, Amber Carter, Anthony Kulesa, John R Barnes, Vivien G Dugan, Deborah T Hung, Paul C Blainey, Pardis C Sabeti
Massively multiplexed nucleic acid detection with Cas13. Nature 582 (7811) (2020)
Joshua J Elacqua, Navpreet Ranu, Sarah E DiIorio, Paul C Blainey
DENT-seq for genome-wide strand-specific identification of DNA single-strand break sites with single-nucleotide resolution. Genome research 31 (1) (2020)
Miguel Reyes, Michael R Filbin, Roby P Bhattacharyya, Kianna Billman, Thomas Eisenhaure, Deborah T Hung, Bruce D Levy, Rebecca M Baron, Paul C Blainey, Marcia B Goldberg, Nir Hacohen
An immune-cell signature of bacterial sepsis. Nature medicine 26 (3) (2020)
Megan Shand, Jose Soto, Lee Lichtenstein, David Benjamin, Yossi Farjoun, Yehuda Brody, Yosef Maruvka, Paul C Blainey, Eric Banks
A validated lineage-derived somatic truth data set enables benchmarking in cancer genome analysis. Communications biology 3 (1) (2020)
Miguel Reyes, Michael R Filbin, Roby P Bhattacharyya, Abraham Sonny, Arnav Mehta, Kianna Billman, Kyle R Kays, Mayra Pinilla-Vera, Maura E Benson, Lisa A Cosimi, Deborah T Hung, Bruce D Levy, Alexandra-Chloe Villani, Moshe Sade-Feldman, Rebecca M Baron, Marcia B Goldberg, Paul C Blainey, Nir Hacohen
Induction of a regulatory myeloid program in bacterial sepsis and severe COVID-19. bioRxiv : the preprint server for biology (2020)
Syuan-Ming Guo, Remi Veneziano, Simon Gordonov, Li Li, Eric Danielson, Karen Perez de Arce, Demian Park, Anthony B Kulesa, Eike-Christian Wamhoff, Paul C Blainey, Edward S Boyden, Jeffrey R Cottrell, Mark Bathe
Multiplexed and high-throughput neuronal fluorescence imaging with diffusible probes. Nature communications 10 (1) (2019)
Stephanie Tzouanas Schmidt, Feiqiao Brian Yu, Paul C Blainey, Andrew P May, Stephen R Quake
Nucleic acid cleavage with a hyperthermophilic Cas9 from an uncultured Ignavibacterium. Proceedings of the National Academy of Sciences of the United States of America 116 (46) (2019)
Marko Järvenpää, Mohamad R Abdul Sater, Georgia K Lagoudas, Paul C Blainey, Loren G Miller, James A McKinnell, Susan S Huang, Yonatan H Grad, Pekka Marttinen
A Bayesian model of acquisition and clearance of bacterial colonization incorporating within-host variation. PLoS computational biology 15 (4) (2019)
Miguel Reyes, Dwayne Vickers, Kianna Billman, Thomas Eisenhaure, Paul Hoover, Edward P Browne, Deepak A Rao, Nir Hacohen, Paul C Blainey
Multiplexed enrichment and genomic profiling of peripheral blood cells reveal subset-specific immune signatures. Science advances 5 (1) (2019)
Jared Kehe, Anthony Kulesa, Anthony Ortiz, Cheri M Ackerman, Sri Gowtham Thakku, Daniel Sellers, Seppe Kuehn, Jeff Gore, Jonathan Friedman, Paul C Blainey
Massively parallel screening of synthetic microbial communities. Proceedings of the National Academy of Sciences of the United States of America 116 (26) (2019)
Bojk A Berghuis, Feiqiao Brian Yu, Frederik Schulz, Paul C Blainey, Tanja Woyke, Stephen R Quake
Hydrogenotrophic methanogenesis in archaeal phylum Verstraetearchaeota reveals the shared ancestry of all methanogens. Proceedings of the National Academy of Sciences of the United States of America 116 (11) (2019)
Anthony Kulesa, Jared Kehe, Juan E Hurtado, Prianca Tawde, Paul C Blainey
Combinatorial drug discovery in nanoliter droplets. Proceedings of the National Academy of Sciences of the United States of America 115 (26) (2018)
Kan Xiong, Graham S Erwin, Aseem Z Ansari, Paul C Blainey
Sliding on DNA: From Peptides to Small Molecules. Angewandte Chemie (International ed. in English) 55 (48) (2016)