Cindy T J van Velthoven (Cindy van Velthoven, Cindy Tj van Velthoven)

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 31

Top Topics

Top Venues

bioRxiv : the preprint server for biology

Science (New York, N.Y.)

This page only lists publications with an associated author ORCID identifier.

Publications

Aixin Zhang, Lei Jin, Shenqin Yao, Makoto Matsuyama, Cindy T J van Velthoven, Heather Anne Sullivan, Na Sun, Manolis Kellis, Bosiljka Tasic, Ian R Wickersham, Xiaoyin Chen
Rabies virus-based barcoded neuroanatomy resolved by single-cell RNA and in situ sequencing. eLife 12 (2024)
Yoav Ben-Simon, Marcus J Hooper, Sujatha Narayan, Tanya L Daigle, Deepanjali Dwivedi, Sharon W Way, Aaron Oster, David A Stafford, John K Mich, Michael J Taormina, Refugio A Martinez, Ximena Opitz-Araya, Jada R Roth, Shona Allen, Angela Ayala, Trygve E Bakken, Tyler Barcelli, Stuard Barta, Jacqueline Bendrick, Darren Bertagnolli, Jessica Bowlus, Gabriella Boyer, Krissy Brouner, Brittny Casian, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Rebecca K Chance, Sakshi Chavan, Maxwell Departee, Nicholas Donadio, Nadezhda I Dotson, Tom Egdorf, Mariano I Gabitto, Amanda Gary, Molly Gasperini, Jeff Goldy, Bryan B Gore, Lucas T Gray, Noah Greisman, Françoise Haeseleer, Carliana Halterman, Olivia Helback, Dirk Hockemeyer, Cindy Huang, Sydney Huff, Avery C Hunker, Nelson J Johansen, Zoe Juneau, Brian E Kalmbach, Shannon Khem, Rana Kutsal, Rachael Larsen, Changkyu Lee, Angus Y Lee, Madison Leibly, Garreck H Lenz, Elizabeth Liang, Nicholas A Lusk, Jocelin Malone, Tyler Mollenkopf, Elyse L Morin, Dakota Newman, Lydia Ng, Kiet Ngo, Victoria Omstead, Alana Oyama, Trangthanh H Pham, Christina Alice Pom, Lydia Potekhina, Shea Ransford, Dean Rette, Christine Rimorin, Dana Rocha, Augustin Ruiz, Raymond E A Sanchez, Adriana Sedeño Cortés, Joshua P Sevigny, Nadiya V Shapovalova, Lyudmila Shulga, Ana R Sigler, La' Akea Siverts, Saroja Somasundaram, Kaiya Stewart, Michael Tieu, Cameron Trader, Cindy T J van Velthoven, Miranda Walker, Natalie Weed, Morgan E Wirthlin, Toren Wood, Brooke Wynalda, Zizhen Yao, Thomas Zhou, Jeanelle Ariza, Nick Dee, Melissa Reding, Kara Ronellenfitch, Shoaib Mufti, Susan M Sunkin, Kimberly A Smith, Luke Esposito, Jack Waters, Bargavi Thyagarajan, Shenqin Yao, Ed S Lein, Hongkui Zeng, Boaz P Levi, John Ngai, Jonathan T Ting, Bosiljka Tasic
A suite of enhancer AAVs and transgenic mouse lines for genetic access to cortical cell types. bioRxiv : the preprint server for biology (2024)
Aixin Zhang, Lei Jin, Shenqin Yao, Makoto Matsuyama, Cindy T J van Velthoven, Heather Anne Sullivan, Na Sun, Manolis Kellis, Bosiljka Tasic, Ian R Wickersham, Xiaoyin Chen
Rabies virus-based barcoded neuroanatomy resolved by single-cell RNA and in situ sequencing. eLife 12 (2024)
Cindy T J van Velthoven, Yuan Gao, Michael Kunst, Changkyu Lee, Delissa A McMillen, Anish Bhaswanth Chakka, Tamara Casper, Michael Clark, Rushil Chakrabarty, Scott Daniel, Tim Dolbeare, Rebecca Ferrer, Jessica Gloe, Jeff Goldy, Junitta B Guzman, Carliana Halterman, Windy Ho, Mike Huang, Katelyn James, Rachel McCue, Beagan Nguy, Trangthanh H Pham, Kara Ronellenfitch, Eric D Thomas, Amy Torkelson, Chelsea M Pagan, Lauren Kruse, Nick Dee, Lydia Ng, Jack Waters, Kimberly A Smith, Bosiljka Tasic, Zizhen Yao, Hongkui Zeng
The transcriptomic and spatial organization of telencephalic GABAergic neuronal types. bioRxiv : the preprint server for biology (2024)
Emily Kussick, Nelson J Johansen, Naz Taskin, Brooke Wynalda, Refugio A Martinez, Erin L Groce, Melissa Reding, Elizabeth Liang, Lyudmila Shulga, Cindy Huang, Tamara Casper, Michael Clark, Windy Ho, Yuan Gao, Cindy T J van Velthoven, Cassandra Sobieski, Rebecca Ferrer, Melissa R Berg, Britni C Curtis, Chris English, Jesse C Day, Michal Fortuna, Nicholas Donadio, Dakota Newman, Shenqin Yao, Anish Bhaswanth Chakka, Jeff Goldy, Amy Torkelson, Junitta B Guzman, Rushil Chakrabarty, Beagan Nguy, Nathan Guilford, Trangthanh H Pham, Vonn Wright, Kara Ronellenfitch, Kathryn Gudsnuk, Bargavi Thyagarajan, Kimberly A Smith, Nick Dee, Hongkui Zeng, Zizhen Yao, Bosiljka Tasic, Boaz P Levi, Rebecca D Hodge, Trygve E Bakken, Ed S Lein, Jonathan T Ting, Tanya L Daigle
Enhancer AAVs for targeting spinal motor neurons and descending motor pathways in rodents and macaque. bioRxiv : the preprint server for biology (2024)
Aixin Zhang, Lei Jin, Shenqin Yao, Makoto Matsuyama, Cindy T J van Velthoven, Heather Anne Sullivan, Na Sun, Manolis Kellis, Bosiljka Tasic, Ian R Wickersham, Xiaoyin Chen
Rabies virus-based barcoded neuroanatomy resolved by single-cell RNA and in situ sequencing. eLife 12 (2024)
Aixin Zhang, Lei Jin, Shenqin Yao, Makoto Matsuyama, Cindy T J van Velthoven, Heather Anne Sullivan, Na Sun, Manolis Kellis, Bosiljka Tasic, Ian R Wickersham, Xiaoyin Chen
Rabies virus-based barcoded neuroanatomy resolved by single-cell RNA and in situ sequencing. eLife 12 (2024)
Yoav Ben-Simon, Marcus J Hooper, Sujatha Narayan, Tanya L Daigle, Deepanjali Dwivedi, Sharon W Way, Aaron Oster, David A Stafford, John K Mich, Michael J Taormina, Refugio A Martinez, Ximena Opitz-Araya, Jada R Roth, Shona Allen, Angela Ayala, Trygve E Bakken, Tyler Barcelli, Stuard Barta, Jacqueline Bendrick, Darren Bertagnolli, Jessica Bowlus, Gabriella Boyer, Krissy Brouner, Brittny Casian, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Rebecca K Chance, Sakshi Chavan, Maxwell Departee, Nicholas Donadio, Nadezhda I Dotson, Tom Egdorf, Mariano I Gabitto, Amanda Gary, Molly Gasperini, Jeff Goldy, Bryan B Gore, Lucas T Gray, Noah Greisman, Françoise Haeseleer, Carliana Halterman, Olivia Helback, Dirk Hockemeyer, Cindy Huang, Sydney Huff, Avery C Hunker, Nelson J Johansen, Zoe Juneau, Brian E Kalmbach, Shannon Khem, Rana Kutsal, Rachael Larsen, Changkyu Lee, Angus Y Lee, Madison Leibly, Garreck H Lenz, Elizabeth Liang, Nicholas A Lusk, Jocelin Malone, Tyler Mollenkopf, Elyse L Morin, Dakota Newman, Lydia Ng, Kiet Ngo, Victoria Omstead, Alana Oyama, Trangthanh H Pham, Christina Alice Pom, Lydia Potekhina, Shea Ransford, Dean Rette, Christine Rimorin, Dana Rocha, Augustin Ruiz, Raymond E A Sanchez, Adriana Sedeño Cortés, Joshua P Sevigny, Nadiya V Shapovalova, Lyudmila Shulga, Ana R Sigler, La' Akea Siverts, Saroja Somasundaram, Kaiya Stewart, Michael Tieu, Cameron Trader, Cindy T J van Velthoven, Miranda Walker, Natalie Weed, Morgan E Wirthlin, Toren Wood, Brooke Wynalda, Zizhen Yao, Thomas Zhou, Jeanelle Ariza, Nick Dee, Melissa Reding, Kara Ronellenfitch, Shoaib Mufti, Susan M Sunkin, Kimberly A Smith, Luke Esposito, Jack Waters, Bargavi Thyagarajan, Shenqin Yao, Ed S Lein, Hongkui Zeng, Boaz P Levi, John Ngai, Jonathan T Ting, Bosiljka Tasic
A suite of enhancer AAVs and transgenic mouse lines for genetic access to cortical cell types. bioRxiv : the preprint server for biology (2024)
Aixin Zhang, Lei Jin, Shenqin Yao, Makoto Matsuyama, Cindy T J van Velthoven, Heather Anne Sullivan, Na Sun, Manolis Kellis, Bosiljka Tasic, Ian R Wickersham, Xiaoyin Chen
Rabies virus-based barcoded neuroanatomy resolved by single-cell RNA and in situ sequencing. eLife 12 (2024)
Aixin Zhang, Lei Jin, Shenqin Yao, Makoto Matsuyama, Cindy T J van Velthoven, Heather Anne Sullivan, Na Sun, Manolis Kellis, Bosiljka Tasic, Ian R Wickersham, Xiaoyin Chen
Rabies virus-based barcoded neuroanatomy resolved by single-cell RNA and in situ sequencing. eLife 12 (2024)
Yoav Ben-Simon, Marcus J Hooper, Sujatha Narayan, Tanya L Daigle, Deepanjali Dwivedi, Sharon W Way, Aaron Oster, David A Stafford, John K Mich, Michael J Taormina, Refugio A Martinez, Ximena Opitz-Araya, Jada R Roth, Shona Allen, Angela Ayala, Trygve E Bakken, Tyler Barcelli, Stuard Barta, Jacqueline Bendrick, Darren Bertagnolli, Jessica Bowlus, Gabriella Boyer, Krissy Brouner, Brittny Casian, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Rebecca K Chance, Sakshi Chavan, Maxwell Departee, Nicholas Donadio, Nadezhda I Dotson, Tom Egdorf, Mariano I Gabitto, Amanda Gary, Molly Gasperini, Jeff Goldy, Bryan B Gore, Lucas T Gray, Noah Greisman, Françoise Haeseleer, Carliana Halterman, Olivia Helback, Dirk Hockemeyer, Cindy Huang, Sydney Huff, Avery C Hunker, Nelson J Johansen, Zoe Juneau, Brian E Kalmbach, Shannon Khem, Rana Kutsal, Rachael Larsen, Changkyu Lee, Angus Y Lee, Madison Leibly, Garreck H Lenz, Elizabeth Liang, Nicholas A Lusk, Jocelin Malone, Tyler Mollenkopf, Elyse L Morin, Dakota Newman, Lydia Ng, Kiet Ngo, Victoria Omstead, Alana Oyama, Trangthanh H Pham, Christina Alice Pom, Lydia Potekhina, Shea Ransford, Dean Rette, Christine Rimorin, Dana Rocha, Augustin Ruiz, Raymond E A Sanchez, Adriana Sedeño Cortés, Joshua P Sevigny, Nadiya V Shapovalova, Lyudmila Shulga, Ana R Sigler, La' Akea Siverts, Saroja Somasundaram, Kaiya Stewart, Michael Tieu, Cameron Trader, Cindy T J van Velthoven, Miranda Walker, Natalie Weed, Morgan E Wirthlin, Toren Wood, Brooke Wynalda, Zizhen Yao, Thomas Zhou, Jeanelle Ariza, Nick Dee, Melissa Reding, Kara Ronellenfitch, Shoaib Mufti, Susan M Sunkin, Kimberly A Smith, Luke Esposito, Jack Waters, Bargavi Thyagarajan, Shenqin Yao, Ed S Lein, Hongkui Zeng, Boaz P Levi, John Ngai, Jonathan T Ting, Bosiljka Tasic
A suite of enhancer AAVs and transgenic mouse lines for genetic access to cortical cell types. bioRxiv : the preprint server for biology (2024)
Cindy T J van Velthoven, Yuan Gao, Michael Kunst, Changkyu Lee, Delissa A McMillen, Anish Bhaswanth Chakka, Tamara Casper, Michael Clark, Rushil Chakrabarty, Scott Daniel, Tim Dolbeare, Rebecca Ferrer, Jessica Gloe, Jeff Goldy, Junitta B Guzman, Carliana Halterman, Windy Ho, Mike Huang, Katelyn James, Rachel McCue, Beagan Nguy, Trangthanh H Pham, Kara Ronellenfitch, Eric D Thomas, Amy Torkelson, Chelsea M Pagan, Lauren Kruse, Nick Dee, Lydia Ng, Jack Waters, Kimberly A Smith, Bosiljka Tasic, Zizhen Yao, Hongkui Zeng
The transcriptomic and spatial organization of telencephalic GABAergic neuronal types. bioRxiv : the preprint server for biology (2024)
Emily Kussick, Nelson J Johansen, Naz Taskin, Brooke Wynalda, Refugio A Martinez, Erin L Groce, Melissa Reding, Elizabeth Liang, Lyudmila Shulga, Cindy Huang, Tamara Casper, Michael Clark, Windy Ho, Yuan Gao, Cindy T J van Velthoven, Cassandra Sobieski, Rebecca Ferrer, Melissa R Berg, Britni C Curtis, Chris English, Jesse C Day, Michal Fortuna, Nicholas Donadio, Dakota Newman, Shenqin Yao, Anish Bhaswanth Chakka, Jeff Goldy, Amy Torkelson, Junitta B Guzman, Rushil Chakrabarty, Beagan Nguy, Nathan Guilford, Trangthanh H Pham, Vonn Wright, Kara Ronellenfitch, Kathryn Gudsnuk, Bargavi Thyagarajan, Kimberly A Smith, Nick Dee, Hongkui Zeng, Zizhen Yao, Bosiljka Tasic, Boaz P Levi, Rebecca D Hodge, Trygve E Bakken, Ed S Lein, Jonathan T Ting, Tanya L Daigle
Enhancer AAVs for targeting spinal motor neurons and descending motor pathways in rodents and macaque. bioRxiv : the preprint server for biology (2024)
Yoav Ben-Simon, Marcus J Hooper, Sujatha Narayan, Tanya L Daigle, Deepanjali Dwivedi, Sharon W Way, Aaron Oster, David A Stafford, John K Mich, Michael J Taormina, Refugio A Martinez, Ximena Opitz-Araya, Jada R Roth, Shona Allen, Angela Ayala, Trygve E Bakken, Tyler Barcelli, Stuard Barta, Jacqueline Bendrick, Darren Bertagnolli, Jessica Bowlus, Gabriella Boyer, Krissy Brouner, Brittny Casian, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Rebecca K Chance, Sakshi Chavan, Maxwell Departee, Nicholas Donadio, Nadezhda I Dotson, Tom Egdorf, Mariano I Gabitto, Amanda Gary, Molly Gasperini, Jeff Goldy, Bryan B Gore, Lucas T Gray, Noah Greisman, Françoise Haeseleer, Carliana Halterman, Olivia Helback, Dirk Hockemeyer, Cindy Huang, Sydney Huff, Avery C Hunker, Nelson J Johansen, Zoe Juneau, Brian E Kalmbach, Shannon Khem, Rana Kutsal, Rachael Larsen, Changkyu Lee, Angus Y Lee, Madison Leibly, Garreck H Lenz, Elizabeth Liang, Nicholas A Lusk, Jocelin Malone, Tyler Mollenkopf, Elyse L Morin, Dakota Newman, Lydia Ng, Kiet Ngo, Victoria Omstead, Alana Oyama, Trangthanh H Pham, Christina Alice Pom, Lydia Potekhina, Shea Ransford, Dean Rette, Christine Rimorin, Dana Rocha, Augustin Ruiz, Raymond E A Sanchez, Adriana Sedeño Cortés, Joshua P Sevigny, Nadiya V Shapovalova, Lyudmila Shulga, Ana R Sigler, La' Akea Siverts, Saroja Somasundaram, Kaiya Stewart, Michael Tieu, Cameron Trader, Cindy T J van Velthoven, Miranda Walker, Natalie Weed, Morgan E Wirthlin, Toren Wood, Brooke Wynalda, Zizhen Yao, Thomas Zhou, Jeanelle Ariza, Nick Dee, Melissa Reding, Kara Ronellenfitch, Shoaib Mufti, Susan M Sunkin, Kimberly A Smith, Luke Esposito, Jack Waters, Bargavi Thyagarajan, Shenqin Yao, Ed S Lein, Hongkui Zeng, Boaz P Levi, John Ngai, Jonathan T Ting, Bosiljka Tasic
A suite of enhancer AAVs and transgenic mouse lines for genetic access to cortical cell types. bioRxiv : the preprint server for biology (2024)
Aixin Zhang, Lei Jin, Shenqin Yao, Makoto Matsuyama, Cindy T J van Velthoven, Heather Anne Sullivan, Na Sun, Manolis Kellis, Bosiljka Tasic, Ian R Wickersham, Xiaoyin Chen
Rabies virus-based barcoded neuroanatomy resolved by single-cell RNA and in situ sequencing. eLife 12 (2024)
Aixin Zhang, Lei Jin, Shenqin Yao, Makoto Matsuyama, Cindy T J van Velthoven, Heather Anne Sullivan, Na Sun, Manolis Kellis, Bosiljka Tasic, Ian R Wickersham, Xiaoyin Chen
Rabies virus-based barcoded neuroanatomy resolved by single-cell RNA and in situ sequencing. eLife 12 (2024)
Cindy T J van Velthoven, Yuan Gao, Michael Kunst, Changkyu Lee, Delissa A McMillen, Anish Bhaswanth Chakka, Tamara Casper, Michael Clark, Rushil Chakrabarty, Scott Daniel, Tim Dolbeare, Rebecca Ferrer, Jessica Gloe, Jeff Goldy, Junitta B Guzman, Carliana Halterman, Windy Ho, Mike Huang, Katelyn James, Beagan Nguy, Trangthanh H Pham, Kara Ronellenfitch, Eric D Thomas, Amy Torkelson, Chelsea M Pagan, Lauren Kruse, Nick Dee, Lydia Ng, Jack Waters, Kimberly A Smith, Bosiljka Tasic, Zizhen Yao, Hongkui Zeng
The transcriptomic and spatial organization of telencephalic GABAergic neuronal types. bioRxiv : the preprint server for biology (2024)
Kelly Jin, Zizhen Yao, Cindy T J van Velthoven, Eitan S Kaplan, Katie Glattfelder, Samuel T Barlow, Gabriella Boyer, Daniel Carey, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Michael Clark, Maxwell Departee, Marie Desierto, Amanda Gary, Jessica Gloe, Jeff Goldy, Nathan Guilford, Junitta B Guzman, Daniel Hirschstein, Changkyu Lee, Elizabeth Liang, Trangthanh H Pham, Melissa Reding, Kara Ronellenfitch, Augustin Ruiz, Joshua P Sevigny, Nadiya V Shapovalova, Lyudmila Shulga, Josef Sulc, Amy Torkelson, Herman Tung, Boaz P Levi, Susan M Sunkin, Nick Dee, Christina Kouskouti, Kimberly A Smith, Bosiljka Tasic, Hongkui Zeng
Cell-type specific molecular signatures of aging revealed in a brain-wide transcriptomic cell-type atlas. bioRxiv : the preprint server for biology (2023)
Aixin Zhang, Lei Jin, Shenqin Yao, Makoto Matsuyama, Cindy T J van Velthoven, Heather Sullivan, Na Sun, Manolis Kellis, Bosiljka Tasic, Bosiljka Tasic, Ian R Wickersham, Xiaoyin Chen
Rabies virus-based barcoded neuroanatomy resolved by single-cell RNA and in situ sequencing. bioRxiv : the preprint server for biology (2023)
Carla C Winter, Anne Jacobi, Junfeng Su, Leeyup Chung, Cindy T J van Velthoven, Zizhen Yao, Changkyu Lee, Zicong Zhang, Shuguang Yu, Kun Gao, Geraldine Duque Salazar, Evgenii Kegeles, Yu Zhang, Makenzie C Tomihiro, Yiming Zhang, Zhiyun Yang, Junjie Zhu, Jing Tang, Xuan Song, Ryan J Donahue, Qing Wang, Delissa A McMillen, Michael Kunst, Ning Wang, Kimberly A Smith, Gabriel E Romero, Michelle M Frank, Alexandra Krol, Riki Kawaguchi, Daniel H Geschwind, Guoping Feng, Lisa V Goodrich, Yuan-Yuan Liu, Bosiljka Tasic, Hongkui Zeng, Zhigang He
A transcriptomic taxonomy of mouse brain-wide spinal projecting neurons. Nature 624 (7991) (2023)
Kelly Jin, Zizhen Yao, Cindy T J van Velthoven, Eitan S Kaplan, Katie Glattfelder, Samuel T Barlow, Gabriella Boyer, Daniel Carey, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Michael Clark, Maxwell Departee, Marie Desierto, Amanda Gary, Jessica Gloe, Jeff Goldy, Nathan Guilford, Junitta B Guzman, Daniel Hirschstein, Changkyu Lee, Elizabeth Liang, Trangthanh H Pham, Melissa Reding, Kara Ronellenfitch, Augustin Ruiz, Joshua P Sevigny, Nadiya V Shapovalova, Lyudmila Shulga, Josef Sulc, Amy Torkelson, Herman Tung, Boaz P Levi, Susan M Sunkin, Nick Dee, Christina Kouskouti, Kimberly A Smith, Bosiljka Tasic, Hongkui Zeng
Cell-type specific molecular signatures of aging revealed in a brain-wide transcriptomic cell-type atlas. bioRxiv : the preprint server for biology (2023)
Kelly Jin, Zizhen Yao, Cindy T J van Velthoven, Eitan S Kaplan, Katie Glattfelder, Samuel T Barlow, Gabriella Boyer, Daniel Carey, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Michael Clark, Maxwell Departee, Marie Desierto, Amanda Gary, Jessica Gloe, Jeff Goldy, Nathan Guilford, Junitta B Guzman, Daniel Hirschstein, Changkyu Lee, Elizabeth Liang, Trangthanh H Pham, Melissa Reding, Kara Ronellenfitch, Augustin Ruiz, Joshua P Sevigny, Nadiya V Shapovalova, Lyudmila Shulga, Josef Sulc, Amy Torkelson, Herman Tung, Boaz P Levi, Susan M Sunkin, Nick Dee, Christina Kouskouti, Kimberly A Smith, Bosiljka Tasic, Hongkui Zeng
Cell-type specific molecular signatures of aging revealed in a brain-wide transcriptomic cell-type atlas. bioRxiv : the preprint server for biology (2023)
Zizhen Yao, Cindy T J van Velthoven, Michael Kunst, Meng Zhang, Delissa A McMillen, Changkyu Lee, Won Jung, Jeff Goldy, Aliya Abdelhak, Pamela Baker, Eliza R Barkan, Darren Bertagnolli, Jazmin Campos, Daniel Carey, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Sakshi Chavan, Min Chen, Michael Clark, Jennie Close, Kirsten Crichton, Scott Daniel, Tim Dolbeare, Lauren Ellingwood, James C Gee, Alexandra Glandon, Jessica Gloe, Joshua Gould, James Gray, Nathan Guilford, Junitta B Guzman, Daniel Hirschstein, Windy Ho, Kelly Jin, Matthew Kroll, Kanan Lathia, Arielle Leon, Brian R Long, Zoe Maltzer, Naomi X Martin, Rachel McCue, Emma Meyerdierks, Thuc Nghi Nguyen, Trangthanh H Pham, Christine Rimorin, Augustin Ruiz, Nadiya Shapovalova, Clifford R Slaughterbeck, Josef Sulc, Michael Tieu, Amy Torkelson, Herman Tung, Nasmil Valera Cuevas, Katherine Wadhwani, Katelyn Kiick, Boaz P Levi, Colin Farrell, Carol L Thompson, Shoaib Mufti, Chelsea M Pagan, Lauren Kruse, Nick Dee, Susan M Sunkin, Christina Kouskouti, Michael J Hawrylycz, Jack Waters, Lydia Ng, Kimberly A Smith, Bosiljka Tasic, Xiaowei Zhuang, Hongkui Zeng
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. bioRxiv : the preprint server for biology (2023)
Kelly Jin, Zizhen Yao, Cindy T J van Velthoven, Eitan S Kaplan, Katie Glattfelder, Samuel T Barlow, Gabriella Boyer, Daniel Carey, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Michael Clark, Maxwell Departee, Marie Desierto, Amanda Gary, Jessica Gloe, Jeff Goldy, Nathan Guilford, Junitta B Guzman, Daniel Hirschstein, Changkyu Lee, Elizabeth Liang, Trangthanh H Pham, Melissa Reding, Kara Ronellenfitch, Augustin Ruiz, Joshua P Sevigny, Nadiya V Shapovalova, Lyudmila Shulga, Josef Sulc, Amy Torkelson, Herman Tung, Boaz P Levi, Susan M Sunkin, Nick Dee, Christina Kouskouti, Kimberly A Smith, Bosiljka Tasic, Hongkui Zeng
Cell-type specific molecular signatures of aging revealed in a brain-wide transcriptomic cell-type atlas. bioRxiv : the preprint server for biology (2023)
Zizhen Yao, Cindy T J van Velthoven, Michael Kunst, Meng Zhang, Delissa A McMillen, Changkyu Lee, Won Jung, Jeff Goldy, Aliya Abdelhak, Matthew Aitken, Katherine Baker, Pamela Baker, Eliza Barkan, Darren Bertagnolli, Ashwin Bhandiwad, Cameron Bielstein, Prajal Bishwakarma, Jazmin Campos, Daniel Carey, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Sakshi Chavan, Min Chen, Michael Clark, Jennie Close, Kirsten Crichton, Scott Daniel, Peter DiValentin, Tim Dolbeare, Lauren Ellingwood, Elysha Fiabane, Timothy Fliss, James Gee, James Gerstenberger, Alexandra Glandon, Jessica Gloe, Joshua Gould, James Gray, Nathan Guilford, Junitta Guzman, Daniel Hirschstein, Windy Ho, Marcus Hooper, Mike Huang, Madison T Hupp, Kelly Jin, Matthew Kroll, Kanan Lathia, Arielle Leon, Su Li, Brian R Long, Zach Madigan, Jessica Malloy, Jocelin Malone, Zoe Maltzer, Naomi Martin, Rachel McCue, Ryan McGinty, Nicholas Mei, Jose Melchor, Emma Meyerdierks, Tyler Mollenkopf, Skyler Moonsman, Thuc Nghi Nguyen, Sven Otto, Trangthanh H Pham, Christine Rimorin, Augustin Ruiz, Raymond E A Sanchez, Lane Sawyer, Nadiya Shapovalova, Noah Shepard, Cliff Slaughterbeck, Josef Sulc, Michael Tieu, Amy Torkelson, Herman Tung, Nasmil Valera Cuevas, Shane Vance, Katherine Wadhwani, Katelyn Ward, Boaz P Levi, Colin Farrell, Rob Young, Brian Staats, Ming-Qiang Michael Wang, Carol L Thompson, Shoaib Mufti, Chelsea M Pagan, Lauren Kruse, Nick Dee, Susan M Sunkin, Luke Esposito, Michael J Hawrylycz, Jack Waters, Lydia Ng, Kimberly A Smith, Bosiljka Tasic, Xiaowei Zhuang, Hongkui Zeng
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. Nature 624 (7991) (2023)
Kelly Jin, Zizhen Yao, Cindy T J van Velthoven, Eitan S Kaplan, Katie Glattfelder, Samuel T Barlow, Gabriella Boyer, Daniel Carey, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Michael Clark, Maxwell Departee, Marie Desierto, Amanda Gary, Jessica Gloe, Jeff Goldy, Nathan Guilford, Junitta B Guzman, Daniel Hirschstein, Changkyu Lee, Elizabeth Liang, Trangthanh H Pham, Melissa Reding, Kara Ronellenfitch, Augustin Ruiz, Joshua P Sevigny, Nadiya V Shapovalova, Lyudmila Shulga, Josef Sulc, Amy Torkelson, Herman Tung, Boaz P Levi, Susan M Sunkin, Nick Dee, Christina Kouskouti, Kimberly A Smith, Bosiljka Tasic, Hongkui Zeng
Cell-type specific molecular signatures of aging revealed in a brain-wide transcriptomic cell-type atlas. bioRxiv : the preprint server for biology (2023)
Zizhen Yao, Hanqing Liu, Fangming Xie, Stephan Fischer, Ricky S Adkins, Andrew I Aldridge, Seth A Ament, Anna Bartlett, M Margarita Behrens, Koen Van den Berge, Darren Bertagnolli, Hector Roux de Bezieux, Tommaso Biancalani, Ali Sina Booeshaghi, Héctor Corrada Bravo, Tamara Casper, Carlo Colantuoni, Jonathan Crabtree, Heather H Creasy, Kirsten Crichton, Megan Crow, Nick Dee, Elizabeth L Dougherty, Wayne I Doyle, Sandrine Dudoit, Rongxin Fang, Victor Felix, Olivia Fong, Michelle G Giglio, Jeff Goldy, Michael J Hawrylycz, Brian R Herb, Ronna Hertzano, Xiaomeng Hou, Qiwen Hu, Jayaram Kancherla, Matthew Kroll, Kanan Lathia, Yang Eric Li, Jacinta D Lucero, Chongyuan Luo, Anup A Mahurkar, Delissa McMillen, Naeem M Nadaf, Joseph R Nery, Thuc Nghi Nguyen, Sheng-Yong Niu, Vasilis Ntranos, Joshua Orvis, Julia K Osteen, Trangthanh H Pham, António Pinto-Duarte, Olivier Poirion, Sebastian Preissl, Elizabeth Purdom, Christine Rimorin, Davide Risso, Angeline C Rivkin, Kimberly A Smith, Kelly Street, Josef Sulc, Valentine Svensson, Michael Tieu, Amy Torkelson, Herman Tung, Eeshit Dhaval Vaishnav, Charles R Vanderburg, Cindy T J van Velthoven, Xinxin Wang, Owen R White, Z Josh Huang, Peter V Kharchenko, Lior Pachter, John Ngai, Aviv Regev, Bosiljka Tasic, Joshua D Welch, Jesse Gillis, Evan Z Macosko, Bing Ren, Joseph R Ecker, Hongkui Zeng, Eran A Mukamel
A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex. Nature 598 (7879) (2021)
Trygve E Bakken, Cindy T J van Velthoven, Vilas Menon, Rebecca D Hodge, Zizhen Yao, Thuc Nghi Nguyen, Lucas T Gray, Gregory D Horwitz, Darren Bertagnolli, Jeff Goldy, Anna Marie Yanny, Emma Garren, Sheana Parry, Tamara Casper, Soraya I Shehata, Eliza R Barkan, Aaron Szafer, Boaz P Levi, Nick Dee, Kimberly A Smith, Susan M Sunkin, Amy Bernard, John Phillips, Michael J Hawrylycz, Christof Koch, Gabe J Murphy, Ed Lein, Hongkui Zeng, Bosiljka Tasic
Single-cell and single-nucleus RNA-seq uncovers shared and distinct axes of variation in dorsal LGN neurons in mice, non-human primates, and humans. eLife 10 (2021)
Ali Sina Booeshaghi, Zizhen Yao, Cindy T J van Velthoven, Kimberly A Smith, Bosiljka Tasic, Hongkui Zeng, Lior Pachter
Isoform cell-type specificity in the mouse primary motor cortex. Nature 598 (7879) (2021)
Antoine de Morrée, Julian D D Klein, Qiang Gan, Jean Farup, Andoni Urtasun, Abhijnya Kanugovi, Biter Bilen, Cindy T J van Velthoven, Marco Quarta, Thomas A Rando
Alternative polyadenylation of Pax3 controls muscle stem cell fate and muscle function. Science (New York, N.Y.) 366 (6466) (2020)
Jeremy A Miller, Nathan W Gouwens, Bosiljka Tasic, Forrest C Collman, Cindy T J van Velthoven, Trygve E Bakken, Michael J Hawrylycz, Hongkui Zeng, Ed S Lein, Amy Bernard
Common cell type nomenclature for the mammalian brain. eLife 9 (2020)