Karthik A Jagadeesh (Karthik Jagadeesh)

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 14

Top Venues

Nature genetics

bioRxiv : the preprint server for biology

Science (New York, N.Y.)

medRxiv : the preprint server for health sciences

Stanford University (PHD)

This page only lists publications with an associated author ORCID identifier.

Education History

Stanford University

United States

PHD :: Computer Science

Publications

Saori Sakaue, Kathryn Weinand, Shakson Isaac, Kushal K Dey, Karthik A Jagadeesh, Masahiro Kanai, Gerald F M Watts, Zhu Zhu, null null, Michael B Brenner, Andrew McDavid, Laura T Donlin, Kevin Wei, Alkes L Price, Soumya Raychaudhuri
Tissue-specific enhancer-gene maps from multimodal single-cell data identify causal disease alleles. Nature genetics (2024)
Sean K Simmons, Xian Adiconis, Nathan Haywood, Jacob Parker, Zechuan Lin, Zhixiang Liao, Idil Tuncali, Aziz M Al'Khafaji, Asa Shin, Karthik A Jagadeesh, Kirk Gosik, Michael Gatzen, Jonathan T Smith, Daniel N El Kodsi, Yuliya Kuras, Clare Baecher-Allan, Geidy E Serrano, Thomas G Beach, Kiran V Garimella, Orit Rozenblatt-Rosen, Aviv Regev, Xianjun Dong, Clemens R Scherzer, Joshua Z Levin
Experimental and Computational Methods for Allelic Imbalance Analysis from Single-Nucleus RNA-seq Data. bioRxiv : the preprint server for biology (2024)
Saori Sakaue, Kathryn Weinand, Shakson Isaac, Kushal K Dey, Karthik A Jagadeesh, Masahiro Kanai, Gerald F M Watts, Zhu Zhu, null null, Michael B Brenner, Andrew McDavid, Laura T Donlin, Kevin Wei, Alkes L Price, Soumya Raychaudhuri
Tissue-specific enhancer-gene maps from multimodal single-cell data identify causal disease alleles. Nature genetics 56 (4) (2024)
Saori Sakaue, Kathryn Weinand, Shakson Isaac, Kushal K Dey, Karthik A Jagadeesh, Masahiro Kanai, Gerald F M Watts, Zhu Zhu, null null, Michael B Brenner, Andrew McDavid, Laura T Donlin, Kevin Wei, Alkes L Price, Soumya Raychaudhuri
Tissue-specific enhancer-gene maps from multimodal single-cell data identify causal disease alleles. Nature genetics 56 (4) (2024)
Saori Sakaue, Kathryn Weinand, Shakson Isaac, Kushal K Dey, Karthik A Jagadeesh, Masahiro Kanai, Gerald F M Watts, Zhu Zhu, null null, Michael B Brenner, Andrew McDavid, Laura T Donlin, Kevin Wei, Alkes L Price, Soumya Raychaudhuri
Tissue-specific enhancer-gene maps from multimodal single-cell data identify causal disease alleles. Nature genetics 56 (4) (2024)
Sean K Simmons, Xian Adiconis, Nathan Haywood, Jacob Parker, Zechuan Lin, Zhixiang Liao, Idil Tuncali, Aziz M Al'Khafaji, Asa Shin, Karthik A Jagadeesh, Kirk Gosik, Michael Gatzen, Jonathan T Smith, Daniel N El Kodsi, Yuliya Kuras, Clare Baecher-Allan, Geidy E Serrano, Thomas G Beach, Kiran V Garimella, Orit Rozenblatt-Rosen, Aviv Regev, Xianjun Dong, Clemens R Scherzer, Joshua Z Levin
Experimental and Computational Methods for Allelic Imbalance Analysis from Single-Nucleus RNA-seq Data. bioRxiv : the preprint server for biology (2024)
Saori Sakaue, Kathryn Weinand, Shakson Isaac, Kushal K Dey, Karthik A Jagadeesh, Masahiro Kanai, Gerald F M Watts, Zhu Zhu, null null, Michael B Brenner, Andrew McDavid, Laura T Donlin, Kevin Wei, Alkes L Price, Soumya Raychaudhuri
Tissue-specific enhancer-gene maps from multimodal single-cell data identify causal disease alleles. Nature genetics 56 (4) (2024)
Saori Sakaue, Kathryn Weinand, Shakson Isaac, Kushal K Dey, Karthik A Jagadeesh, Masahiro Kanai, Gerald F M Watts, Zhu Zhu, null null, Michael B Brenner, Andrew McDavid, Laura T Donlin, Kevin Wei, Alkes L Price, Soumya Raychaudhuri
Tissue-specific enhancer-gene maps from multimodal single-cell data identify causal disease alleles. Nature genetics 56 (4) (2024)
Saori Sakaue, Kathryn Weinand, Shakson Isaac, Kushal K Dey, Karthik A Jagadeesh, Masahiro Kanai, Gerald F M Watts, Zhu Zhu, null null, Michael B Brenner, Andrew McDavid, Laura T Donlin, Kevin Wei, Alkes L Price, Soumya Raychaudhuri
Tissue-specific enhancer-gene maps from multimodal single-cell data identify causal disease alleles. Nature genetics 56 (4) (2024)
Elizabeth Dorans, Karthik A Jagadeesh, Kushal K Dey, Alkes L Price
Linking regulatory variants to target genes by integrating single-cell multiome methods and genomic distance. medRxiv : the preprint server for health sciences (2024)
Joyce B Kang, Amber Z Shen, Saisriram Gurajala, Aparna Nathan, Laurie Rumker, Vitor R C Aguiar, Cristian Valencia, Kaitlyn A Lagattuta, Fan Zhang, Anna Helena Jonsson, Seyhan Yazar, Jose Alquicira-Hernandez, Hamed Khalili, Ashwin N Ananthakrishnan, Karthik A Jagadeesh, Kushal K Dey, null null, Mark J Daly, Ramnik J Xavier, Laura T Donlin, Jennifer H Anolik, Joseph E Powell, Deepak A Rao, Michael B Brenner, Maria Gutierrez-Arcelus, Yang Luo, Saori Sakaue, Soumya Raychaudhuri
Mapping the dynamic genetic regulatory architecture of HLA genes at single-cell resolution. Nature genetics (2023)
Karthik A Jagadeesh, Kushal K Dey, Daniel T Montoro, Rahul Mohan, Steven Gazal, Jesse M Engreitz, Ramnik J Xavier, Alkes L Price, Aviv Regev
Identifying disease-critical cell types and cellular processes by integrating single-cell RNA-sequencing and human genetics. Nature genetics 54 (10) (2022)
Johannes Birgmeier, Maximilian Haeussler, Cole A Deisseroth, Ethan H Steinberg, Karthik A Jagadeesh, Alexander J Ratner, Harendra Guturu, Aaron M Wenger, Mark E Diekhans, Peter D Stenson, David N Cooper, Christopher Ré, Alan H Beggs, Jonathan A Bernstein, Gill Bejerano
AMELIE speeds Mendelian diagnosis by matching patient phenotype and genotype to primary literature. Science translational medicine 12 (544) (2021)
Karthik A Jagadeesh, David J Wu, Johannes A Birgmeier, Dan Boneh, Gill Bejerano
Deriving genomic diagnoses without revealing patient genomes. Science (New York, N.Y.) 357 (6352) (2017)

Karthik A Jagadeesh.css-eqlu8i{font-size:small;padding-left:4px;} (Karthik Jagadeesh)

Publication Activity (10 Years)

Top Topics

Top Venues

Karthik A Jagadeesh (Karthik Jagadeesh)