Kathryn Crouch

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 20

Top Topics

Clinical Practice

Gene Expression

Toxoplasma Gondii

Top Venues

Nucleic acids research

This page only lists publications with an associated author ORCID identifier.

Publications

William Haese-Hill, Kathryn Crouch, Thomas Dan Otto
Annotation and visualization of parasite, fungi and arthropod genomes with Companion. Nucleic acids research (2024)
Evelina Y Basenko, Achchuthan Shanmugasundram, Ulrike Böhme, David Starns, Paul A Wilkinson, Helen R Davison, Kathryn Crouch, Gareth Maslen, Omar S Harb, Beatrice Amos, Mary Ann McDowell, Jessica C Kissinger, David S Roos, Andrew R Jones
What is new in FungiDB: a web-based bioinformatics platform for omics-scale data analysis for fungal and oomycete species. Genetics 227 (1) (2024)
Evelina Y Basenko, Achchuthan Shanmugasundram, Ulrike Böhme, David Starns, Paul A Wilkinson, Helen R Davison, Kathryn Crouch, Gareth Maslen, Omar S Harb, Beatrice Amos, Mary Ann McDowell, Jessica C Kissinger, David S Roos, Andrew R Jones
What is new in FungiDB: a web-based bioinformatics platform for omics-scale data analysis for fungal and oomycete species. Genetics 227 (1) (2024)
Evelina Y Basenko, Achchuthan Shanmugasundram, Ulrike Böhme, David Starns, Paul A Wilkinson, Helen R Davison, Kathryn Crouch, Gareth Maslen, Omar S Harb, Beatrice Amos, Mary Ann McDowell, Jessica C Kissinger, David S Roos, Andrew R Jones
What is new in FungiDB: a web-based bioinformatics platform for omics-scale data analysis for fungal and oomycete species. Genetics 227 (1) (2024)
William Haese-Hill, Kathryn Crouch, Thomas Dan Otto
Annotation and visualization of parasite, fungi and arthropod genomes with Companion. Nucleic acids research 52 (W1) (2024)
Evelina Y Basenko, Achchuthan Shanmugasundram, Ulrike Böhme, David Starns, Paul A Wilkinson, Helen R Davison, Kathryn Crouch, Gareth Maslen, Omar S Harb, Beatrice Amos, Mary Ann McDowell, Jessica C Kissinger, David S Roos, Andrew R Jones
What is new in FungiDB: a web-based bioinformatics platform for omics-scale data analysis for fungal and oomycete species. Genetics (2024)
William Haese-Hill, Kathryn Crouch, Thomas Dan Otto
Annotation and visualization of parasite, fungi and arthropod genomes with Companion. Nucleic acids research 52 (W1) (2024)
Evelina Y Basenko, Achchuthan Shanmugasundram, Ulrike Böhme, David Starns, Paul A Wilkinson, Helen R Davison, Kathryn Crouch, Gareth Maslen, Omar S Harb, Beatrice Amos, Mary Ann McDowell, Jessica C Kissinger, David S Roos, Andrew R Jones
What is new in FungiDB: a web-based bioinformatics platform for omics-scale data analysis for fungal and oomycete species. Genetics 227 (1) (2024)
Evelina Y Basenko, Achchuthan Shanmugasundram, Ulrike Böhme, David Starns, Paul A Wilkinson, Helen R Davison, Kathryn Crouch, Gareth Maslen, Omar S Harb, Beatrice Amos, Mary Ann McDowell, Jessica C Kissinger, David S Roos, Andrew R Jones
What is new in FungiDB: a web-based bioinformatics platform for omics-scale data analysis for fungal and oomycete species. Genetics 227 (1) (2024)
William Haese-Hill, Kathryn Crouch, Thomas Dan Otto
peaks2utr: a robust Python tool for the annotation of 3' UTRs. Bioinformatics (Oxford, England) 39 (3) (2023)
Jorge Alvarez-Jarreta, Beatrice Amos, Cristina Aurrecoechea, Saikou Bah, Matthieu Barba, Ana Barreto, Evelina Y Basenko, Robert Belnap, Ann Blevins, Ulrike Böhme, John Brestelli, Stuart Brown, Danielle Callan, Lahcen I Campbell, George K Christophides, Kathryn Crouch, Helen R Davison, Jeremy D DeBarry, Richard Demko, Ryan Doherty, Yikun Duan, Walter Dundore, Sarah Dyer, Dave Falke, Steve Fischer, Bindu Gajria, Daniel Galdi, Gloria I Giraldo-Calderón, Omar S Harb, Elizabeth Harper, Danica Helb, Connor Howington, Sufen Hu, Jay Humphrey, John Iodice, Andrew R Jones, John Judkins, Sarah A Kelly, Jessica C Kissinger, Nupur Kittur, Dae Kun Kwon, Kristopher Lamoureux, Wei Li, Disha Lodha, Robert M MacCallum, Gareth Maslen, Mary Ann McDowell, Jeremy Myers, Mustafa Veysi Nural, David S Roos, Samuel S C Rund, Achchuthan Shanmugasundram, Vasily Sitnik, Drew Spruill, David Starns, Sheena Shah Tomko, Haiming Wang, Susanne Warrenfeltz, Robert Wieck, Paul A Wilkinson, Jie Zheng
VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center in 2023. Nucleic acids research (2023)
Stevie A Bain, Heleen Plaisier, Felicity Anderson, Nicola Cook, Kathryn Crouch, Thomas R Meagher, Michael G Ritchie, Edward W J Wallace, Daniel Barker
Bringing bioinformatics to schools with the 4273pi project. PLoS computational biology 18 (1) (2022)
Beatrice Amos, Cristina Aurrecoechea, Matthieu Barba, Ana Barreto, Evelina Y Basenko, Wojciech Bażant, Robert Belnap, Ann S Blevins, Ulrike Böhme, John Brestelli, Brian P Brunk, Mark X Caddick, Danielle Callan, Lahcen Campbell, Mikkel B Christensen, George K Christophides, Kathryn Crouch, Kristina Davis, Jeremy DeBarry, Ryan Doherty, Yikun Duan, Michael Dunn, Dave Falke, Steve Fisher, Paul Flicek, Brett Fox, Bindu Gajria, Gloria I Giraldo-Calderón, Omar S Harb, Elizabeth Harper, Christiane Hertz-Fowler, Mark J Hickman, Connor Howington, Sufen Hu, Jay Humphrey, John Iodice, Andrew R Jones, John Judkins, Sarah A Kelly, Jessica C Kissinger, Dae Kun Kwon, Kristopher Lamoureux, Daniel Lawson, Wei Li, Kallie Lies, Disha Lodha, Jamie Long, Robert M MacCallum, Gareth Maslen, Mary Ann McDowell, Jaroslaw Nabrzyski, David S Roos, Samuel S C Rund, Stephanie Wever Schulman, Achchuthan Shanmugasundram, Vasily Sitnik, Drew Spruill, David Starns, Christian J Stoeckert, Sheena Shah Tomko, Haiming Wang, Susanne Warrenfeltz, Robert Wieck, Paul A Wilkinson, Lin Xu, Jie Zheng
VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center. Nucleic acids research (2021)
Pieter C Steketee, Emily A Dickie, James Iremonger, Kathryn Crouch, Edith Paxton, Siddharth Jayaraman, Omar A Alfituri, Georgina Awuah-Mensah, Ryan Ritchie, Achim Schnaufer, Tim Rowan, Harry P de Koning, Catarina Gadelha, Bill Wickstead, Michael P Barrett, Liam J Morrison
Divergent metabolism between Trypanosoma congolense and Trypanosoma brucei results in differential sensitivity to metabolic inhibition. PLoS pathogens 17 (7) (2021)
Pieter C Steketee, Federica Giordani, Isabel M Vincent, Kathryn Crouch, Fiona Achcar, Nicholas J Dickens, Liam J Morrison, Annette MacLeod, Michael P Barrett
Transcriptional differentiation of Trypanosoma brucei during in vitro acquisition of resistance to acoziborole. PLoS neglected tropical diseases 15 (11) (2021)
Jeziel Dener Damasceno, João Luis Reis Cunha, Kathryn Crouch, Dario Beraldi, Craig Lapsley, Luiz R O Tosi, Daniella Castanheira Bartholomeu, Richard McCulloch
Conditional knockout of RAD51-related genes in Leishmania major reveals a critical role for homologous recombination during genome replication. PLoS genetics 16 (7) (2020)
Jeziel Dener Damasceno, Catarina A Marques, Dario Beraldi, Kathryn Crouch, Craig Lapsley, Ricardo Obonaga, Luiz Ro Tosi, Richard McCulloch
Genome duplication in Leishmania major relies on persistent subtelomeric DNA replication. eLife 9 (2020)
Mahmood M Alam, Ana Sanchez-Azqueta, Omar Janha, Erika L Flannery, Amit Mahindra, Kopano Mapesa, Aditya B Char, Dev Sriranganadane, Nicolas M B Brancucci, Yevgeniya Antonova-Koch, Kathryn Crouch, Nelson Victor Simwela, Scott B Millar, Jude Akinwale, Deborah Mitcheson, Lev Solyakov, Kate Dudek, Carolyn Jones, Cleofé Zapatero, Christian Doerig, Davis C Nwakanma, Maria Jesús Vázquez, Gonzalo Colmenarejo, Maria Jose Lafuente-Monasterio, Maria Luisa Leon, Paulo H C Godoi, Jonathan M Elkins, Andrew P Waters, Andrew G Jamieson, Elena Fernández Álvaro, Lisa C Ranford-Cartwright, Matthias Marti, Elizabeth A Winzeler, Francisco Javier Gamo, Andrew B Tobin
Validation of the protein kinase PfCLK3 as a multistage cross-species malarial drug target. Science (New York, N.Y.) 365 (6456) (2020)
Evelina Y Basenko, Jane A Pulman, Achchuthan Shanmugasundram, Omar S Harb, Kathryn Crouch, David Starns, Susanne Warrenfeltz, Cristina Aurrecoechea, Christian J Stoeckert, Jessica C Kissinger, David S Roos, Christiane Hertz-Fowler
FungiDB: An Integrated Bioinformatic Resource for Fungi and Oomycetes. Journal of fungi (Basel, Switzerland) 4 (1) (2018)
Emma M Briggs, Kathryn Crouch, Leandro Lemgruber Soares, Craig Lapsley, Richard McCulloch
Ribonuclease H1-targeted R-loops in surface antigen gene expression sites can direct trypanosome immune evasion. PLoS genetics 14 (12) (2018)