Namrata D Udeshi

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 30

Top Topics

Liquid Chromatography

Endoplasmic Reticulum

Dna Damage Response

Top Venues

Nature communications

The Journal of cell biology

bioRxiv : the preprint server for biology

Cancer discovery

This page only lists publications with an associated author ORCID identifier.

Publications

Claudia Ctortecka, Natalie M Clark, Brian W Boyle, Anjali Seth, D R Mani, Namrata D Udeshi, Steven A Carr
Automated single-cell proteomics providing sufficient proteome depth to study complex biology beyond cell type classifications. Nature communications 15 (1) (2024)
Claudia Ctortecka, Natalie M Clark, Brian Boyle, Anjali Seth, D R Mani, Namrata D Udeshi, Steven A Carr
Automated single-cell proteomics providing sufficient proteome depth to study complex biology beyond cell type classifications. bioRxiv : the preprint server for biology (2024)
Namrata D Udeshi, Charles Xu, Zuzhi Jiang, Shihong Max Gao, Qian Yin, Wei Luo, Steven A Carr, Mark M Davis, Jiefu Li
Cell-surface Milieu Remodeling in Human Dendritic Cell Activation. Journal of immunology (Baltimore, Md. : 1950) (2024)
Mariska S Simpson, Heidi De Luca, Sarah Cauthorn, Phi Luong, Namrata D Udeshi, Tanya Svinkina, Stefanie S Schmieder, Steven A Carr, Michael J Grey, Wayne I Lencer
IRE1α recognizes a structural motif in cholera toxin to activate an unfolded protein response. The Journal of cell biology 223 (7) (2024)
Claudia Ctortecka, Natalie M Clark, Brian W Boyle, Anjali Seth, D R Mani, Namrata D Udeshi, Steven A Carr
Automated single-cell proteomics providing sufficient proteome depth to study complex biology beyond cell type classifications. Nature communications 15 (1) (2024)
Claudia Ctortecka, Natalie M Clark, Brian Boyle, Anjali Seth, D R Mani, Namrata D Udeshi, Steven A Carr
Automated single-cell proteomics providing sufficient proteome depth to study complex biology beyond cell type classifications. bioRxiv : the preprint server for biology (2024)
Claudia Ctortecka, Natalie M Clark, Brian W Boyle, Anjali Seth, D R Mani, Namrata D Udeshi, Steven A Carr
Automated single-cell proteomics providing sufficient proteome depth to study complex biology beyond cell type classifications. Nature communications 15 (1) (2024)
Mariska S Simpson, Heidi De Luca, Sarah Cauthorn, Phi Luong, Namrata D Udeshi, Tanya Svinkina, Stefanie S Schmieder, Steven A Carr, Michael J Grey, Wayne I Lencer
IRE1α recognizes a structural motif in cholera toxin to activate an unfolded protein response. The Journal of cell biology 223 (7) (2024)
Mariska S Simpson, Heidi De Luca, Sarah Cauthorn, Phi Luong, Namrata D Udeshi, Tanya Svinkina, Stefanie S Schmieder, Steven A Carr, Michael J Grey, Wayne I Lencer
IRE1α recognizes a structural motif in cholera toxin to activate an unfolded protein response. The Journal of cell biology 223 (7) (2024)
Claudia Ctortecka, Natalie M Clark, Brian W Boyle, Anjali Seth, D R Mani, Namrata D Udeshi, Steven A Carr
Automated single-cell proteomics providing sufficient proteome depth to study complex biology beyond cell type classifications. Nature communications 15 (1) (2024)
Claudia Ctortecka, Natalie M Clark, Brian Boyle, Anjali Seth, D R Mani, Namrata D Udeshi, Steven A Carr
Automated single-cell proteomics providing sufficient proteome depth to study complex biology beyond cell type classifications. bioRxiv : the preprint server for biology (2024)
Le Xiao, Xiong Pi, Alissa C Goss, Tarick El-Baba, Julian F Ehrmann, Elizabeth Grinkevich, Silvana Bazua-Valenti, Valeria Padovano, Seth L Alper, Dominique Carey, Namrata D Udeshi, Steven A Carr, Juan Lorenzo Pablo, Carol V Robinson, Anna Greka, Hao Wu
Molecular basis of TMED9 oligomerization and entrapment of misfolded protein cargo in the early secretory pathway. Science advances 10 (38) (2024)
Claudia Ctortecka, Natalie M Clark, Brian Boyle, Anjali Seth, D R Mani, Namrata D Udeshi, Steven A Carr
Automated single-cell proteomics providing sufficient proteome depth to study complex biology beyond cell type classifications. bioRxiv : the preprint server for biology (2024)
Mariska S Simpson, Heidi De Luca, Sarah Cauthorn, Phi Luong, Namrata D Udeshi, Tanya Svinkina, Stefanie S Schmieder, Steven A Carr, Michael J Grey, Wayne I Lencer
IRE1α recognizes a structural motif in cholera toxin to activate an unfolded protein response. The Journal of cell biology 223 (7) (2024)
Mariska S Simpson, Heidi De Luca, Sarah Cauthorn, Phi Luong, Namrata D Udeshi, Tanya Svinkina, Stefanie S Schmieder, Steven A Carr, Michael J Grey, Wayne I Lencer
IRE1α recognizes a structural motif in cholera toxin to activate an unfolded protein response. The Journal of cell biology 223 (7) (2024)
Jennifer G Abelin, Erik J Bergstrom, Keith D Rivera, Hannah B Taylor, Susan Klaeger, Charles Xu, Eva K Verzani, C Jackson White, Hilina B Woldemichael, Maya Virshup, Meagan E Olive, Myranda Maynard, Stephanie A Vartany, Joseph D Allen, Kshiti Phulphagar, M Harry Kane, Suzanna Rachimi, D R Mani, Michael A Gillette, Shankha Satpathy, Karl R Clauser, Namrata D Udeshi, Steven A Carr
Workflow enabling deepscale immunopeptidome, proteome, ubiquitylome, phosphoproteome, and acetylome analyses of sample-limited tissues. Nature communications 14 (1) (2023)
Lisa D Cervia, Tsukasa Shibue, Ashir A Borah, Benjamin Gaeta, Linh He, Lisa Leung, Naomi Li, Sydney M Moyer, Brian H Shim, Nancy Dumont, Alfredo E Gonzalez, Nolan R Bick, Mariya Kazachkova, Joshua M Dempster, John Michael Krill-Burger, Frederica Piccioni, Namrata D Udeshi, Meagan E Olive, Steven A Carr, David E Root, James M McFarland, Francisca Vazquez, William C Hahn
A Ubiquitination Cascade Regulating the Integrated Stress Response and Survival in Carcinomas. Cancer discovery 13 (3) (2023)
Song-Yi Lee, Joleen S Cheah, Boxuan Zhao, Charles Xu, Heegwang Roh, Christina K Kim, Kelvin F Cho, Namrata D Udeshi, Steven A Carr, Alice Y Ting
Engineered allostery in light-regulated LOV-Turbo enables precise spatiotemporal control of proximity labeling in living cells. Nature methods (2023)
Lisa D Cervia, Tsukasa Shibue, Ashir A Borah, Benjamin Gaeta, Linh He, Lisa Leung, Naomi Li, Sydney M Moyer, Brian H Shim, Nancy Dumont, Alfredo E Gonzalez, Nolan R Bick, Mariya Kazachkova, Joshua M Dempster, John Michael Krill-Burger, Frederica Piccioni, Namrata D Udeshi, Meagan E Olive, Steven A Carr, David E Root, James M McFarland, Francisca Vazquez, William C Hahn
A Ubiquitination Cascade Regulating the Integrated Stress Response and Survival in Carcinomas. Cancer discovery 13 (3) (2023)
Lisa D Cervia, Tsukasa Shibue, Ashir A Borah, Benjamin Gaeta, Linh He, Lisa Leung, Naomi Li, Sydney M Moyer, Brian H Shim, Nancy Dumont, Alfredo E Gonzalez, Nolan R Bick, Mariya Kazachkova, Joshua M Dempster, John Michael Krill-Burger, Frederica Piccioni, Namrata D Udeshi, Meagan E Olive, Steven A Carr, David E Root, James M McFarland, Francisca Vazquez, William C Hahn
A Ubiquitination Cascade Regulating the Integrated Stress Response and Survival in Carcinomas. Cancer discovery 13 (3) (2023)
Lisa D Cervia, Tsukasa Shibue, Ashir A Borah, Benjamin Gaeta, Linh He, Lisa Leung, Naomi Li, Sydney M Moyer, Brian H Shim, Nancy Dumont, Alfredo E Gonzalez, Nolan R Bick, Mariya Kazachkova, Joshua M Dempster, John Michael Krill-Burger, Frederica Piccioni, Namrata D Udeshi, Meagan E Olive, Steven A Carr, David E Root, James M McFarland, Francisca Vazquez, William C Hahn
A ubiquitination cascade regulating the integrated stress response and survival in carcinomas. Cancer discovery (2022)
Lishan Fang, Dane Ford-Roshon, Max Russo, Casey O'Brien, Xiaozhe Xiong, Carino Gurjao, Maximilien Grandclaudon, Srivatsan Raghavan, Steven M Corsello, Steven A Carr, Namrata D Udeshi, James Berstler, Ewa Sicinska, Kimmie Ng, Marios Giannakis
RNF43 G659fs is an oncogenic colorectal cancer mutation and sensitizes tumor cells to PI3K/mTOR inhibition. Nature communications 13 (1) (2022)
Tiziano Bernasocchi, Geniver El Tekle, Marco Bolis, Azzurra Mutti, Arianna Vallerga, Laura P Brandt, Filippo Spriano, Tanya Svinkina, Marita Zoma, Valentina Ceserani, Anna Rinaldi, Hana Janouskova, Daniela Bossi, Manuela Cavalli, Simone Mosole, Roger Geiger, Ze Dong, Cai-Guang Yang, Domenico Albino, Andrea Rinaldi, Peter Schraml, Simon Linder, Giuseppina M Carbone, Andrea Alimonti, Francesco Bertoni, Holger Moch, Steven A Carr, Wilbert Zwart, Marianna Kruithof de Julio, Mark A Rubin, Namrata D Udeshi, Jean-Philippe P Theurillat
Dual functions of SPOP and ERG dictate androgen therapy responses in prostate cancer. Nature communications 12 (1) (2021)
Ilia A Droujinine, Amanda S Meyer, Dan Wang, Namrata D Udeshi, Yanhui Hu, David Rocco, Jill A McMahon, Rui Yang, JinJin Guo, Luye Mu, Dominique K Carey, Tanya Svinkina, Rebecca Zeng, Tess Branon, Areya Tabatabai, Justin A Bosch, John M Asara, Alice Y Ting, Steven A Carr, Andrew P McMahon, Norbert Perrimon
Proteomics of protein trafficking by in vivo tissue-specific labeling. Nature communications 12 (1) (2021)
Wen-Ning Zhao, Brian T D Tobe, Namrata D Udeshi, Lucius L Xuan, Cameron D Pernia, Daniel P Zolg, Amanda J Roberts, Deepak Mani, Sarah R Blumenthal, Iren Kurtser, Debasis Patnaik, Irina N Gaisina, Joshua Bishop, Steven D Sheridan, Jasmin Lalonde, Steven A Carr, Evan Y Snyder, Stephen J Haggarty
Discovery of suppressors of CRMP2 phosphorylation reveals compounds that mimic the behavioral effects of lithium on amphetamine-induced hyperlocomotion. Translational psychiatry 10 (1) (2020)
Namrata D Udeshi, Deepak C Mani, Shankha Satpathy, Shaunt Fereshetian, Jessica A Gasser, Tanya Svinkina, Meagan E Olive, Benjamin L Ebert, Philipp Mertins, Steven A Carr
Rapid and deep-scale ubiquitylation profiling for biology and translational research. Nature communications 11 (1) (2020)
Kelvin F Cho, Tess C Branon, Namrata D Udeshi, Samuel A Myers, Steven A Carr, Alice Y Ting
Proximity labeling in mammalian cells with TurboID and split-TurboID. Nature protocols 15 (12) (2020)
Philipp Mertins, Lauren C Tang, Karsten Krug, David J Clark, Marina A Gritsenko, Lijun Chen, Karl R Clauser, Therese R Clauss, Punit Shah, Michael A Gillette, Vladislav A Petyuk, Stefani N Thomas, D R Mani, Filip Mundt, Ronald J Moore, Yingwei Hu, Rui Zhao, Michael Schnaubelt, Hasmik Keshishian, Matthew E Monroe, Zhen Zhang, Namrata D Udeshi, Deepak Mani, Sherri R Davies, R Reid Townsend, Daniel W Chan, Richard D Smith, Hui Zhang, Tao Liu, Steven A Carr
Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography-mass spectrometry. Nature protocols 13 (7) (2019)
Tess C Branon, Justin A Bosch, Ariana D Sanchez, Namrata D Udeshi, Tanya Svinkina, Steven A Carr, Jessica L Feldman, Norbert Perrimon, Alice Y Ting
Efficient proximity labeling in living cells and organisms with TurboID. Nature biotechnology 36 (9) (2018)
Namrata D Udeshi, Kayvon Pedram, Tanya Svinkina, Shaunt Fereshetian, Samuel A Myers, Ozan Aygun, Karsten Krug, Karl Clauser, Dominic Ryan, Tslil Ast, Vamsi K Mootha, Alice Y Ting, Steven A Carr
Antibodies to biotin enable large-scale detection of biotinylation sites on proteins. Nature methods 14 (12) (2017)