Nuno A Fonseca (Nuno Fonseca)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2015-2023
Publications (10 Years): 19

Top Topics

Dna Methylation

Gene Expression

Top Venues

Nature communications

Biodiversity data journal

Microbiology resource announcements

This page only lists publications with an associated author ORCID identifier.

Publications

Joana G Guedes, Rogério Ribeiro, Inês Carqueijeiro, Ana Luísa Guimarães, Cláudia Bispo, John Patrick Archer, Herlander Azevedo, Nuno A Fonseca, Mariana Sottomayor
The leaf idioblastome of the medicinal plant Catharanthus roseus reveals commitment with stress resistance and alkaloid metabolism. Journal of experimental botany (2023)
Joana Paupério, Luis Martin Gonzalez, Jesus Martinez, Marcos A González, Filipa M S Martins, Joana Veríssimo, Pamela Puppo, Joana Pinto, Cátia Chaves, Catarina Jesus Pinho, José Manuel Grosso-Silva, Lorenzo Quaglietta, Teresa Luísa L Silva, Pedro Sousa, Paulo Celio Alves, Nuno A Fonseca, Pedro Beja, Sonia A Ferreira
The InBIO barcoding initiative database: DNA barcodes of Iberian Trichoptera, documenting biodiversity for freshwater biomonitoring in a Mediterranean hotspot. Biodiversity data journal 11 (2023)
Joana Paupério, Luis Martin Gonzalez, Jesus Martinez, Marcos A González, Filipa M S Martins, Joana Veríssimo, Pamela Puppo, Joana Pinto, Cátia Chaves, Catarina Jesus Pinho, José Manuel Grosso-Silva, Lorenzo Quaglietta, Teresa Luísa L Silva, Pedro Sousa, Paulo Celio Alves, Nuno A Fonseca, Pedro Beja, Sonia A Ferreira
The InBIO barcoding initiative database: DNA barcodes of Iberian Trichoptera, documenting biodiversity for freshwater biomonitoring in a Mediterranean hotspot. Biodiversity data journal 11 (2023)
Bastian Egeter, Joana Veríssimo, Manuel Lopes-Lima, Cátia Chaves, Joana Pinto, Nicoletta Riccardi, Pedro Beja, Nuno A Fonseca
Speeding up the detection of invasive bivalve species using environmental DNA: A Nanopore and Illumina sequencing comparison. Molecular ecology resources 22 (6) (2022)
Manik Garg, Dominique-Laurent Couturier, Jeremie Nsengimana, Nuno A Fonseca, Matthew J Wongchenko, Yibing Yan, Martin Lauss, Göran B Jönsson, Julia Newton-Bishop, Christine Parkinson, Mark Ross Middleton, D Timothy Timothy Bishop, Sarah McDonald, Nikki Stefanos, John A Tadross, Ismael A Vergara, Serigne N Lô, Felicity Newell, James S Wilmott, John F Thompson, Georgina V Long, Richard A Scolyer, Pippa Corrie, David J Adams, Alvis Brazma, Roy Rabbie
Author Correction: Tumour gene expression signature in primary melanoma predicts long-term outcomes. Nature communications 13 (1) (2022)
Yiqun Zhang, Fengju Chen, Nuno A Fonseca, Yao He, Masashi Fujita, Hidewaki Nakagawa, Zemin Zhang, Alvis Brazma, null null, null null, Chad J Creighton, null null
Author Correction: High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations. Nature communications 13 (1) (2022)
Bruno Cavadas, Marina Leite, Nicole Pedro, Ana Cristina Magalhães, Joana Melo, Marcelo Correia, Valdemar Máximo, Rui Camacho, Nuno A Fonseca, Ceu Figueiredo, Luísa Pereira
Shedding Light on the African Enigma: In Vitro Testing of Homo sapiens-Helicobacter pylori Coevolution. Microorganisms 9 (2) (2021)
Camila Fernandes, Leonor Martins, Miguel Teixeira, Jochen Blom, Joël F Pothier, Nuno A Fonseca, Fernando Tavares
Comparative Genomics of Xanthomonas euroxanthea and Xanthomonas arboricola pv. juglandis Strains Isolated from a Single Walnut Host Tree. Microorganisms 9 (3) (2021)
Manik Garg, Dominique-Laurent Couturier, Jeremie Nsengimana, Nuno A Fonseca, Matthew J Wongchenko, Yibing Yan, Martin Lauss, Göran B Jönsson, Julia Newton-Bishop, Christine Parkinson, Mark Ross Middleton, D Timothy Timothy Bishop, Sarah McDonald, Nikki Stefanos, John A Tadross, Ismael A Vergara, Serigne N Lô, Felicity Newell, James S Wilmott, John F Thompson, Georgina V Long, Richard A Scolyer, Pippa Corrie, David J Adams, Alvis Brazma, Roy Rabbie
Tumour gene expression signature in primary melanoma predicts long-term outcomes. Nature communications 12 (1) (2021)
Miguel Teixeira, Camila Fernandes, Cátia Chaves, Joana Pinto, Fernando Tavares, Nuno A Fonseca
Complete Genome Sequence Obtained by Nanopore and Illumina Hybrid Assembly of Xanthomonas arboricola pv. juglandis CPBF 427, Isolated from Buds of a Walnut Tree. Microbiology resource announcements 10 (10) (2021)
Daniel Oliveira, Cátia Chaves, Joana Pinto, Joana Paupério, Nuno A Fonseca, Pedro Beja, Sonia A Ferreira
DNA Barcoding of Portuguese Lacewings (Neuroptera) and Snakeflies (Raphidioptera) (Insecta, Neuropterida). ZooKeys 1054 (2021)
Sonia A Ferreira, José Manuel Tierno de Figueroa, Filipa M S Martins, Joana Verissimo, Lorenzo Quaglietta, José Manuel Grosso-Silva, Pedro B Lopes, Pedro Sousa, Joana Paupério, Nuno A Fonseca, Pedro Beja
The InBIO Barcoding Initiative Database: contribution to the knowledge on DNA barcodes of Iberian Plecoptera. Biodiversity data journal 8 (2020)
Sonia A Ferreira, Rui Andrade, Ana R Gonçalves, Pedro Sousa, Joana Paupério, Nuno A Fonseca, Pedro Beja
The InBIO Barcoding Initiative Database: DNA barcodes of Portuguese Diptera 01. Biodiversity data journal 8 (2020)
Yiqun Zhang, Fengju Chen, Nuno A Fonseca, Yao He, Masashi Fujita, Hidewaki Nakagawa, Zemin Zhang, Alvis Brazma, null null, null null, Chad J Creighton, null null
High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations. Nature communications 11 (1) (2020)
Bruno Cavadas, Rui Camacho, Joana C Ferreira, Rui Manuel Ferreira, Ceu Figueiredo, Alvis Brazma, Nuno A Fonseca, Luísa Pereira
Gastric Microbiome Diversities in Gastric Cancer Patients from Europe and Asia Mimic the Human Population Structure and Are Partly Driven by Microbiome Quantitative Trait Loci. Microorganisms 8 (8) (2020)
Bidesh Mahata, Jhuma Pramanik, Louise van der Weyden, Krzysztof Polański, Gozde Kar, Angela Riedel, Xi Chen, Nuno A Fonseca, Kousik Kundu, Lia S Campos, Edward J Ryder, Graham Duddy, Izabela Walczak, Klaus Okkenhaug, David J Adams, Jacqueline D Shields, Sarah A Teichmann
Tumors induce de novo steroid biosynthesis in T cells to evade immunity. Nature communications 11 (1) (2020)
Miguel Teixeira, Leonor Martins, Camila Fernandes, Cátia Chaves, Joana Pinto, Fernando Tavares, Nuno A Fonseca
Complete Genome Sequences of Walnut-Associated Xanthomonas euroxanthea Strains CPBF 367 and CPBF 426 Obtained by Illumina/Nanopore Hybrid Assembly. Microbiology resource announcements 9 (45) (2020)
Mary J Goldman, Junjun Zhang, Nuno A Fonseca, Isidro Cortes-Ciriano, Linda Xiang, Brian Craft, Elena Piñeiro-Yañez, Brian D O'Connor, Wojciech Bazant, Elisabet Barrera, Alfonso Muñoz-Pomer, Robert Petryszak, Anja Füllgrabe, Fátima Al-Shahrour, Maria Keays, David Haussler, John N Weinstein, Wolfgang Huber, Alfonso Valencia, Peter J Park, Irene Papatheodorou, Jingchun Zhu, Vincent Ferretti, Miguel Vazquez
A user guide for the online exploration and visualization of PCAWG data. Nature communications 11 (1) (2020)
Maria I Pratas, Bruno Aguiar, Jorge Vieira, Vanessa Nunes, Vanessa Teixeira, Nuno A Fonseca, Amy Iezzoni, Steve van Nocker, Cristina P Vieira
Inferences on specificity recognition at the Malus×domestica gametophytic self-incompatibility system. Scientific reports 8 (1) (2018)
Marcela K Tello-Ruiz, Joshua Stein, Sharon Wei, Justin Preece, Andrew Olson, Sushma Naithani, Vindhya Amarasinghe, Palitha Dharmawardhana, Yinping Jiao, Joseph Mulvaney, Sunita Kumari, Kapeel Chougule, Justin Elser, Bo Wang, James Thomason, Daniel M Bolser, Arnaud Kerhornou, Brandon Walts, Nuno A Fonseca, Laura Huerta, Maria Keays, Y Amy Tang, Helen Parkinson, Antonio Fabregat, Sheldon McKay, Joel Weiser, Peter D'Eustachio, Lincoln Stein, Robert Petryszak, Paul Julian Kersey, Pankaj Jaiswal, Doreen Ware
Gramene 2016: comparative plant genomics and pathway resources. Nucleic acids research 44 (D1) (2015)
Robert Petryszak, Maria Keays, Y Amy Tang, Nuno A Fonseca, Elisabet Barrera, Tony Burdett, Anja Füllgrabe, Alfonso Muñoz-Pomer Fuentes, Simon Jupp, Satu Koskinen, Oliver Mannion, Laura Huerta, Karine Megy, Catherine Snow, Eleanor Williams, Mitra Barzine, Emma Hastings, Hendrik Weisser, James Wright, Pankaj Jaiswal, Wolfgang Huber, Jyoti Choudhary, Helen E Parkinson, Alvis Brazma
Expression Atlas update--an integrated database of gene and protein expression in humans, animals and plants. Nucleic acids research 44 (D1) (2015)