Siqi Liu (Siqi Lui)

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 31

Top Topics

Liquid Chromatography

Induced Pluripotent Stem Cells

Top Venues

Journal of proteome research

Analytical chemistry

Rapid communications in mass spectrometry : RCM

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Gilbert S Omenn, Lydie Lane, Christopher M Overall, Cecilia Lindskog, Charles Pineau, Nicolle H Packer, Ileana M Cristea, Susan T Weintraub, Sandra E Orchard, Michael H A Roehrl, Edouard Collins Nice, Tiannan Guo, Jennifer E Van Eyk, Siqi Liu, Nuno Bandeira, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
The 2023 Report on the Proteome from the HUPO Human Proteome Project. Journal of proteome research 23 (2) (2024)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Cecilia Lindskog, Charles Pineau, Nicolle H Packer, Ileana M Cristea, Susan T Weintraub, Sandra E Orchard, Michael H A Roehrl, Edouard Collins Nice, Tiannan Guo, Jennifer E Van Eyk, Siqi Liu, Nuno Bandeira, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
The 2023 Report on the Proteome from the HUPO Human Proteome Project. Journal of proteome research 23 (2) (2024)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Cecilia Lindskog, Charles Pineau, Nicolle H Packer, Ileana M Cristea, Susan T Weintraub, Sandra E Orchard, Michael H A Roehrl, Edouard Collins Nice, Tiannan Guo, Jennifer E Van Eyk, Siqi Liu, Nuno Bandeira, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
The 2023 Report on the Proteome from the HUPO Human Proteome Project. Journal of proteome research 23 (2) (2024)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Cecilia Lindskog, Charles Pineau, Nicolle H Packer, Ileana M Cristea, Susan T Weintraub, Sandra E Orchard, Michael H A Roehrl, Edouard Collins Nice, Tiannan Guo, Jennifer E Van Eyk, Siqi Liu, Nuno Bandeira, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
The 2023 Report on the Proteome from the HUPO Human Proteome Project. Journal of proteome research 23 (2) (2024)
Xi Gao, Xiaoyong Li, Lingyun Chen, Shuyan Chen, Guixue Hou, Liang Lin, Qunjie Wang, Jiuxin Qu, Siqi Liu
A biomarker panel of secondary hypertension is simultaneously quantified by coupling of magnetic solid-phase extraction and liquid chromatography-tandem mass spectrometry. Rapid communications in mass spectrometry : RCM 38 (6) (2024)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Cecilia Lindskog, Charles Pineau, Nicolle H Packer, Ileana M Cristea, Susan T Weintraub, Sandra E Orchard, Michael H A Roehrl, Edouard Collins Nice, Tiannan Guo, Jennifer E Van Eyk, Siqi Liu, Nuno Bandeira, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
The 2023 Report on the Proteome from the HUPO Human Proteome Project. Journal of proteome research 23 (2) (2024)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Cecilia Lindskog, Charles Pineau, Nicolle H Packer, Ileana M Cristea, Susan T Weintraub, Sandra E Orchard, Michael H A Roehrl, Edouard Collins Nice, Tiannan Guo, Jennifer E Van Eyk, Siqi Liu, Nuno Bandeira, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
The 2023 Report on the Proteome from the HUPO Human Proteome Project. Journal of proteome research 23 (2) (2024)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Cecilia Lindskog, Charles Pineau, Nicolle H Packer, Ileana M Cristea, Susan T Weintraub, Sandra E Orchard, Michael H A Roehrl, Edouard Collins Nice, Tiannan Guo, Jennifer E Van Eyk, Siqi Liu, Nuno Bandeira, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
The 2023 Report on the Proteome from the HUPO Human Proteome Project. Journal of proteome research (2024)
Xiaolian Ning, Qidan Li, Jin Zi, Zhanlong Mei, Jie Liu, Yuxing Zhang, Mao Bi, Yan Ren, Xingang Liu, Chao Lv, Hequan Yao, Jianguo Sun, Feng Rao, Shuwei Li, Siqi Liu
New Set of Isobaric Labeling Reagents for Quantitative 16Plex Proteomics. Analytical chemistry (2023)
Hao Chen, Yuefei Zhang, Haichao Zhou, Weiran Chen, Jiayi Peng, Yang Feng, Linyuan Fan, Jun Li, Jin Zi, Yan Ren, Qidan Li, Siqi Liu
Routine Workflow of Spatial Proteomics on Micro-formalin-Fixed Paraffin-Embedded Tissues. Analytical chemistry (2023)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Charles Pineau, Nicolle H Packer, Ileana M Cristea, Cecilia Lindskog, Susan T Weintraub, Sandra E Orchard, Michael H A Roehrl, Edouard Collins Nice, Siqi Liu, Nuno Bandeira, Yi-Ju Chen, Tiannan Guo, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
The 2022 Report on the Human Proteome from the HUPO Human Proteome Project. Journal of proteome research (2022)
Yuxing Zhang, Lingling Yang, Kailun Fang, Qidan Li, Hongkai Xu, Yan Ren, Jin Zi, Charlie Degui Chen, Siqi Liu
Dynamic Responses of Chromosome-Binding Protein Complexes to Meiotic Prophase I of Mouse Spermatocyte. Journal of proteome research 21 (11) (2022)
Yuxing Zhang, Deliang Huang, Ning Lv, Guilan Zhu, Jinghan Peng, Tiansheng Chou, Zhibin Zhu, Ju Wang, Yuanyuan Chen, Xiangdong Fang, Jiuxin Qu, Jun Chen, Siqi Liu
Global Quantification of Glutathione S-Transferases in Human Serum Using LC-MS/MS Coupled with Affinity Enrichment. Journal of proteome research 21 (5) (2022)
Yang Zhou, Yifan Tan, Guixue Hou, Yan Ren, Yamei Deng, Keqiang Yan, Yue Zhang, Liang Lin, Xiaomin Lou, Siqi Liu
Pathway attenuation of fatty acid beta-oxidation in the skeletal muscle of a type 2 diabetic mouse model. Rapid communications in mass spectrometry : RCM 34 (19) (2021)
Ju Wang, Wei Zheng, Shuoping Zhang, Keqiang Yan, Miao Jin, Huiling Hu, Zhen Ma, Fei Gong, Guangxiu Lu, Yan Ren, Liang Lin, Ge Lin, Liang Hu, Siqi Liu
An increase of phosphatidylcholines in follicular fluid implies attenuation of embryo quality on day 3 post-fertilization. BMC biology 19 (1) (2021)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Young-Ki Paik, Ileana M Cristea, Fernando José Corrales, Cecilia Lindskog, Susan T Weintraub, Michael H A Roehrl, Siqi Liu, Nuno Bandeira, Sudhir Srivastava, Yi-Ju Chen, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
Progress Identifying and Analyzing the Human Proteome: 2021 Metrics from the HUPO Human Proteome Project. Journal of proteome research 20 (12) (2021)
Peng Wu, Dongsheng Chen, Wencheng Ding, Ping Wu, Hongyan Hou, Yong Bai, Yuwen Zhou, Kezhen Li, Shunian Xiang, Panhong Liu, Jia Ju, Ensong Guo, Jia Liu, Bin Yang, Junpeng Fan, Liang He, Ziyong Sun, Ling Feng, Jian Wang, Tangchun Wu, Hao Wang, Jin Cheng, Hui Xing, Yifan Meng, Yongsheng Li, Yuanliang Zhang, Hongbo Luo, Gang Xie, Xianmei Lan, Ye Tao, Jiafeng Li, Hao Yuan, Kang Huang, Wan Sun, Xiaobo Qian, Zhichao Li, Mingxi Huang, Peiwen Ding, Haoyu Wang, Jiaying Qiu, Feiyue Wang, Shiyou Wang, Jiacheng Zhu, Xiangning Ding, Chaochao Chai, Langchao Liang, Xiaoling Wang, Lihua Luo, Yuzhe Sun, Ying Yang, Zhenkun Zhuang, Tao Li, Lei Tian, Shaoqiao Zhang, Linnan Zhu, Ashley Chang, Lei Chen, Yiquan Wu, Xiaoyan Ma, Fang Chen, Yan Ren, Xue Liu, Siqi Liu, Jian Wang, Huanming Yang, Lin Wang, Chaoyang Sun, Ding Ma, Xin Jin, Gang Chen
The trans-omics landscape of COVID-19. Nature communications 12 (1) (2021)
Fanyu Bu, Qingqiu Cheng, Yuxing Zhang, Xia Zhang, Keqiang Yan, Frank Liu, Zelong Li, Xiaomei Lu, Yan Ren, Siqi Liu
Discovery of Missing Proteins from an Aneuploidy Cell Line Using a Proteogenomic Approach. Journal of proteome research 20 (12) (2021)
Yue Xuan, Nicholas W Bateman, Sebastien Gallien, Sandra Goetze, Yue Zhou, Pedro Navarro, Mo Hu, Niyati Parikh, Brian L Hood, Kelly A Conrads, Christina Loosse, Reta Birhanu Kitata, Sander R Piersma, Davide Chiasserini, Hongwen Zhu, Guixue Hou, Muhammad Tahir, Andrew Macklin, Amanda Khoo, Xiuxuan Sun, Ben Crossett, Albert Sickmann, Yu-Ju Chen, Connie R Jimenez, Hu Zhou, Siqi Liu, Martin Røssel Larsen, Thomas Kislinger, Zhinan Chen, Benjamin L Parker, Stuart J Cordwell, Bernd Wollscheid, Thomas P Conrads
Standardization and harmonization of distributed multi-center proteotype analysis supporting precision medicine studies. Nature communications 11 (1) (2020)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Ileana M Cristea, Fernando José Corrales, Cecilia Lindskog, Young-Ki Paik, Jennifer E Van Eyk, Siqi Liu, Stephen R Pennington, Michael P Snyder, Mark S Baker, Nuno Bandeira, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
Research on the Human Proteome Reaches a Major Milestone: >90% of Predicted Human Proteins Now Credibly Detected, According to the HUPO Human Proteome Project. Journal of proteome research 19 (12) (2020)
Yuanliang Zhang, Keren Zhang, Fanyu Bu, Piliang Hao, Huanming Yang, Siqi Liu, Yan Ren
D283 Med, a Cell Line Derived from Peritoneal Metastatic Medulloblastoma: A Good Choice for Missing Protein Discovery. Journal of proteome research 19 (12) (2020)
Yamei Deng, Zhe Ren, Qingfei Pan, Da Qi, Bo Wen, Yan Ren, Huanming Yang, Lin Wu, Fei Chen, Siqi Liu
pClean: An Algorithm To Preprocess High-Resolution Tandem Mass Spectra for Database Searching. Journal of proteome research 18 (9) (2019)
Yuanliang Zhang, Zhilong Lin, Yifan Tan, Fanyu Bu, Piliang Hao, Keren Zhang, Huanming Yang, Siqi Liu, Yan Ren
Exploration of Missing Proteins by a Combination Approach to Enrich the Low-Abundance Hydrophobic Proteins from Four Cancer Cell Lines. Journal of proteome research 19 (1) (2019)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Fernando J Corrales, Jochen M Schwenk, Young-Ki Paik, Jennifer E Van Eyk, Siqi Liu, Stephen Pennington, Michael P Snyder, Mark S Baker, Eric W Deutsch
Progress on Identifying and Characterizing the Human Proteome: 2019 Metrics from the HUPO Human Proteome Project. Journal of proteome research 18 (12) (2019)
Zhilong Lin, Yuanliang Zhang, Huozhen Pan, Piliang Hao, Siqi Li, Yanbin He, Huanming Yang, Siqi Liu, Yan Ren
Alternative Strategy To Explore Missing Proteins with Low Molecular Weight. Journal of proteome research 18 (12) (2019)
Li Zhang, Yan Ren, Tao Yang, Guangwei Li, Jianhai Chen, Andrea R Gschwend, Yeisoo Yu, Guixue Hou, Jin Zi, Ruo Zhou, Bo Wen, Jianwei Zhang, Kapeel Chougule, Muhua Wang, Dario Copetti, Zhiyu Peng, Chengjun Zhang, Yong Edward Zhang, Yidan Ouyang, Rod A Wing, Siqi Liu, Manyuan Long
Rapid evolution of protein diversity by de novo origination in Oryza. Nature ecology & evolution 3 (4) (2019)
Chunwei Ma, Yan Ren, Jiarui Yang, Zhe Ren, Huanming Yang, Siqi Liu
Improved Peptide Retention Time Prediction in Liquid Chromatography through Deep Learning. Analytical chemistry 90 (18) (2018)
Young-Ki Paik, Lydie Lane, Takeshi Kawamura, Yu-Ju Chen, Je-Yoel Cho, Joshua LaBaer, Jong Shin Yoo, Gilberto Barbosa Domont, Fernando José Corrales, Gilbert S Omenn, Alexander Archakov, Sergio Encarnación-Guevara, Siqi Liu, Ghasem Hosseini Salekdeh, Jin-Young Cho, Chae-Yeon Kim, Christopher M Overall
Launching the C-HPP neXt-CP50 Pilot Project for Functional Characterization of Identified Proteins with No Known Function. Journal of proteome research 17 (12) (2018)
Yuanliang Zhang, Zhilong Lin, Piliang Hao, Kexia Hou, Yuanyuan Sui, Keren Zhang, Yanbin He, Hong Li, Huanming Yang, Siqi Liu, Yan Ren
Improvement of Peptide Separation for Exploring the Missing Proteins Localized on Membranes. Journal of proteome research 17 (12) (2018)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Fernando José Corrales, Jochen M Schwenk, Young-Ki Paik, Jennifer E Van Eyk, Siqi Liu, Michael Snyder, Mark S Baker, Eric W Deutsch
Progress on Identifying and Characterizing the Human Proteome: 2018 Metrics from the HUPO Human Proteome Project. Journal of proteome research 17 (12) (2018)
Yan Ren, Yanbin He, Zhilong Lin, Jin Zi, Huanming Yang, Shenyan Zhang, Xiaomin Lou, Quanhui Wang, Shuwei Li, Siqi Liu
Reagents for Isobaric Labeling Peptides in Quantitative Proteomics. Analytical chemistry 90 (21) (2018)