Gilbert S Omenn

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 57

Top Venues

Journal of proteome research

Proceedings of the National Academy of Sciences of the United States of America

medRxiv : the preprint server for health sciences

Journal of medical Internet research

Institute for Systems Biology

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Institute for Systems Biology

United States

Affiliate Faculty

University of Michigan

United States

Director :: Center for Computational Medicine & Bioinformatics

University of Michigan

United States

Professor :: Medical School - Internal Medicine

University of Michigan

United States

Professor :: Medical School - Human Genetics

University of Michigan

United States

Professor :: School of Public Health

Fred Hutchinson Cancer Research Center

United States

Affiliate

University of Michigan Health System

United States

Executive Vice President for Medical Affairs, CEO of University of Michigan Health System :: Medical Affairs

Fred Hutchinson Cancer Research Center

United States

Member (Joint)

Executive Office of the President

United States

Associate Director for Human Resources, Veterans and Labor :: Office of Management and Budget

Executive Office of the President

United States

Associate Director :: Office of Science and Technology Policy

Executive Office of the President

United States

Assistant Director :: Office of Science and Technology Policy

Publications

Gilbert S Omenn, Lydie Lane, Christopher M Overall, Cecilia Lindskog, Charles Pineau, Nicolle H Packer, Ileana M Cristea, Susan T Weintraub, Sandra E Orchard, Michael H A Roehrl, Edouard Collins Nice, Tiannan Guo, Jennifer E Van Eyk, Siqi Liu, Nuno Bandeira, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
The 2023 Report on the Proteome from the HUPO Human Proteome Project. Journal of proteome research 23 (2) (2024)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Cecilia Lindskog, Charles Pineau, Nicolle H Packer, Ileana M Cristea, Susan T Weintraub, Sandra E Orchard, Michael H A Roehrl, Edouard Collins Nice, Tiannan Guo, Jennifer E Van Eyk, Siqi Liu, Nuno Bandeira, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
The 2023 Report on the Proteome from the HUPO Human Proteome Project. Journal of proteome research 23 (2) (2024)
Carey Beth Goldberg, Laura Adams, David Blumenthal, Patricia Flatley Brennan, Noah Brown, Atul Janardhan Butte, Morgan Cheatham, Dave deBronkart, Jennifer Dixon, Jeffrey Drazen, Barbara J Evans, Sara M Hoffman, Chris C Holmes, Peter Lee, Arjun Kumar Manrai, Gilbert S Omenn, Jonathan B Perlin, Rachel Ramoni, Guillermo Sapiro, Rupa Sarkar, Harpreet Sood, Effy Vayena, Isaac S Kohane, null null
To do no harm - and the most good - with AI in health care. Nature medicine 30 (3) (2024)
Carey Beth Goldberg, Laura Adams, David Blumenthal, Patricia Flatley Brennan, Noah Brown, Atul Janardhan Butte, Morgan Cheatham, Dave deBronkart, Jennifer Dixon, Jeffrey Drazen, Barbara J Evans, Sara M Hoffman, Chris C Holmes, Peter Lee, Arjun Kumar Manrai, Gilbert S Omenn, Jonathan B Perlin, Rachel Ramoni, Guillermo Sapiro, Rupa Sarkar, Harpreet Sood, Effy Vayena, Isaac S Kohane, null null
To do no harm - and the most good - with AI in health care. Nature medicine 30 (3) (2024)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Cecilia Lindskog, Charles Pineau, Nicolle H Packer, Ileana M Cristea, Susan T Weintraub, Sandra E Orchard, Michael H A Roehrl, Edouard Collins Nice, Tiannan Guo, Jennifer E Van Eyk, Siqi Liu, Nuno Bandeira, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
The 2023 Report on the Proteome from the HUPO Human Proteome Project. Journal of proteome research 23 (2) (2024)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Cecilia Lindskog, Charles Pineau, Nicolle H Packer, Ileana M Cristea, Susan T Weintraub, Sandra E Orchard, Michael H A Roehrl, Edouard Collins Nice, Tiannan Guo, Jennifer E Van Eyk, Siqi Liu, Nuno Bandeira, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
The 2023 Report on the Proteome from the HUPO Human Proteome Project. Journal of proteome research 23 (2) (2024)
Carey Beth Goldberg, Laura Adams, David Blumenthal, Patricia Flatley Brennan, Noah Brown, Atul Janardhan Butte, Morgan Cheatham, Dave deBronkart, Jennifer Dixon, Jeffrey Drazen, Barbara J Evans, Sara M Hoffman, Chris C Holmes, Peter Lee, Arjun Kumar Manrai, Gilbert S Omenn, Jonathan B Perlin, Rachel Ramoni, Guillermo Sapiro, Rupa Sarkar, Harpreet Sood, Effy Vayena, Isaac S Kohane, null null
To do no harm - and the most good - with AI in health care. Nature medicine (2024)
Duxin Sun, Christian Macedonia, Zhigang Chen, Sriram Chandrasekaran, Kayvan Najarian, Simon Zhou, Tim Cernak, Vicki L Ellingrod, H V Jagadish, Bernard Marini, Manjunath Pai, Angela Violi, Jason C Rech, Shaomeng Wang, Yan Li, Brian Athey, Gilbert S Omenn
Can Machine Learning Overcome the 95% Failure Rate and Reality that Only 30% of Approved Cancer Drugs Meaningfully Extend Patient Survival? Journal of medicinal chemistry (2024)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Cecilia Lindskog, Charles Pineau, Nicolle H Packer, Ileana M Cristea, Susan T Weintraub, Sandra E Orchard, Michael H A Roehrl, Edouard Collins Nice, Tiannan Guo, Jennifer E Van Eyk, Siqi Liu, Nuno Bandeira, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
The 2023 Report on the Proteome from the HUPO Human Proteome Project. Journal of proteome research 23 (2) (2024)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Cecilia Lindskog, Charles Pineau, Nicolle H Packer, Ileana M Cristea, Susan T Weintraub, Sandra E Orchard, Michael H A Roehrl, Edouard Collins Nice, Tiannan Guo, Jennifer E Van Eyk, Siqi Liu, Nuno Bandeira, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
The 2023 Report on the Proteome from the HUPO Human Proteome Project. Journal of proteome research 23 (2) (2024)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Cecilia Lindskog, Charles Pineau, Nicolle H Packer, Ileana M Cristea, Susan T Weintraub, Sandra E Orchard, Michael H A Roehrl, Edouard Collins Nice, Tiannan Guo, Jennifer E Van Eyk, Siqi Liu, Nuno Bandeira, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
The 2023 Report on the Proteome from the HUPO Human Proteome Project. Journal of proteome research (2024)
Emily Getzen, Amelia Li Min Tan, Gabriel A Brat, Gilbert S Omenn, Zachary H Strasser, null null, Qi Long, John H Holmes, Danielle L Mowery
Leveraging informative missing data to learn about acute respiratory distress syndrome and mortality in long-term hospitalized COVID-19 patients throughout the years of the pandemic. medRxiv : the preprint server for health sciences (2023)
Emily Getzen, Amelia Li Min Tan, Gabriel A Brat, Gilbert S Omenn, Zachary H Strasser, null null, Qi Long, John H Holmes, Danielle L Mowery
Leveraging informative missing data to learn about acute respiratory distress syndrome and mortality in long-term hospitalized COVID-19 patients throughout the years of the pandemic. medRxiv : the preprint server for health sciences (2023)
Emily Getzen, Amelia Li Min Tan, Gabriel A Brat, Gilbert S Omenn, Zachary H Strasser, null null, Qi Long, John H Holmes, Danielle L Mowery
Leveraging informative missing data to learn about acute respiratory distress syndrome and mortality in long-term hospitalized COVID-19 patients throughout the years of the pandemic. medRxiv : the preprint server for health sciences (2023)
Robin Pearce, Xiaoqiang Huang, Gilbert S Omenn, Yang Zhang
De novo protein fold design through sequence-independent fragment assembly simulations. Proceedings of the National Academy of Sciences of the United States of America 120 (4) (2023)
Emily Getzen, Amelia Li Min Tan, Gabriel A Brat, Gilbert S Omenn, Zachary H Strasser, null null, Qi Long, John H Holmes, Danielle L Mowery
Leveraging informative missing data to learn about acute respiratory distress syndrome and mortality in long-term hospitalized COVID-19 patients throughout the years of the pandemic. medRxiv : the preprint server for health sciences (2023)
Robin Pearce, Xiaoqiang Huang, Gilbert S Omenn, Yang Zhang
De novo protein fold design through sequence-independent fragment assembly simulations. Proceedings of the National Academy of Sciences of the United States of America 120 (4) (2023)
Emily Getzen, Amelia Li Min Tan, Gabriel A Brat, Gilbert S Omenn, Zachary H Strasser, null null, Qi Long, John H Holmes, Danielle L Mowery
Leveraging informative missing data to learn about acute respiratory distress syndrome and mortality in long-term hospitalized COVID-19 patients throughout the years of the pandemic. medRxiv : the preprint server for health sciences (2023)
Robin Pearce, Xiaoqiang Huang, Gilbert S Omenn, Yang Zhang
De novo protein fold design through sequence-independent fragment assembly simulations. Proceedings of the National Academy of Sciences of the United States of America 120 (4) (2023)
Robin Pearce, Xiaoqiang Huang, Gilbert S Omenn, Yang Zhang
De novo protein fold design through sequence-independent fragment assembly simulations. Proceedings of the National Academy of Sciences of the United States of America 120 (4) (2023)
Yuxuan Song, Chengxin Zhang, Gilbert S Omenn, Matthew J O'Meara, Joshua D Welch
Predicting the Structural Impact of Human Alternative Splicing. bioRxiv : the preprint server for biology (2023)
Yuxuan Song, Chengxin Zhang, Gilbert S Omenn, Matthew J O'Meara, Joshua D Welch
Predicting the Structural Impact of Human Alternative Splicing. bioRxiv : the preprint server for biology (2023)
Robin Pearce, Xiaoqiang Huang, Gilbert S Omenn, Yang Zhang
De novo protein fold design through sequence-independent fragment assembly simulations. Proceedings of the National Academy of Sciences of the United States of America 120 (4) (2023)
Yuxuan Song, Chengxin Zhang, Gilbert S Omenn, Matthew J O'Meara, Joshua D Welch
Predicting the Structural Impact of Human Alternative Splicing. bioRxiv : the preprint server for biology (2023)
Harrison G Zhang, Arianna Dagliati, Zahra Shakeri Hossein Abad, Xin Xiong, Clara-Lea Bonzel, Zongqi Xia, Bryce W Q Tan, Paul Avillach, Gabriel A Brat, Chuan Hong, Michele Morris, Shyam Visweswaran, Lav P Patel, Alba Gutierrez-Sacristan, David A Hanauer, John H Holmes, Malarkodi Jebathilagam Samayamuthu, Florence T Bourgeois, Sehi L' Yi, Sarah E Maidlow, Bertrand Moal, Shawn N Murphy, Zachary H Strasser, Antoine Neuraz, Kee-Yuan Ngiam, Ne Hooi Will Loh, Gilbert S Omenn, Andrea Prunotto, Lauren A Dalvin, Jeffrey G Klann, Petra Schubert, Fernando J Sanz Vidorreta, Vincent Benoit, Guillaume Verdy, Ramakanth Kavuluru, Hossein Estiri, Yuan Luo, Alberto Malovini, Valentina Tibollo, Riccardo Bellazzi, Kelly Cho, Yuk-Lam Anne Ho, Amelia Li Min Tan, Byorn W L Tan, Nils Gehlenborg, Sara Lozano-Zahonero, Vianney Jouhet, Luca Chiovato, Bruce J Aronow, Emma M S Toh, Wei Gen Scott Wong, Sara Pizzimenti, Kavishwar B Wagholikar, Mauro Bucalo, null null, Tianxi Cai, Andrew Michael South, Isaac S Kohane, Griffin M Weber
International electronic health record-derived post-acute sequelae profiles of COVID-19 patients. NPJ digital medicine 5 (1) (2022)
Griffin M Weber, Chuan Hong, Zongqi Xia, Nathan P Palmer, Paul Avillach, Sehi L' Yi, Mark S Keller, Shawn N Murphy, Alba Gutierrez-Sacristan, Clara-Lea Bonzel, Arnaud Serret-Larmande, Antoine Neuraz, Gilbert S Omenn, Shyam Visweswaran, Jeffrey G Klann, Andrew Michael South, Ne Hooi Will Loh, Mario Cannataro, Brett K Beaulieu-Jones, Riccardo Bellazzi, Giuseppe Agapito, Mario Alessiani, Bruce J Aronow, Douglas S Bell, Vincent Benoit, Florence T Bourgeois, Luca Chiovato, Kelly Cho, Arianna Dagliati, Scott L DuVall, Noelia García Barrio, David A Hanauer, Yuk-Lam Anne Ho, John H Holmes, Richard W Issitt, Molei Liu, Yuan Luo, Kristine E Lynch, Sarah E Maidlow, Alberto Malovini, Kenneth D Mandl, Chengsheng Mao, Michael E Matheny, Jason H Moore, Jeffrey S Morris, Michele Morris, Danielle L Mowery, Kee-Yuan Ngiam, Lav P Patel, Miguel Pedrera Jiménez, Rachel B Ramoni, Emily R Schriver, Petra Schubert, Pablo Serrano Balazote, Anastassia Spiridou, Amelia L M Tan, Byorn W L Tan, Valentina Tibollo, Carlo Torti, Enrico M Trecarichi, Xuan Wang, null null, Isaac S Kohane, Tianxi Cai, Gabriel A Brat
International comparisons of laboratory values from the 4CE collaborative to predict COVID-19 mortality. NPJ digital medicine 5 (1) (2022)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Charles Pineau, Nicolle H Packer, Ileana M Cristea, Cecilia Lindskog, Susan T Weintraub, Sandra E Orchard, Michael H A Roehrl, Edouard Collins Nice, Siqi Liu, Nuno Bandeira, Yi-Ju Chen, Tiannan Guo, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
The 2022 Report on the Human Proteome from the HUPO Human Proteome Project. Journal of proteome research (2022)
Jeffrey G Klann, Zachary H Strasser, Meghan R Hutch, Chris J Kennedy, Jayson S Marwaha, Michele M Morris, Malarkodi Jebathilagam Samayamuthu, Ashley C Pfaff, Hossein Estiri, Andrew Michael South, Griffin M Weber, William Yuan, Paul Avillach, Kavishwar B Wagholikar, Yuan Luo, null null, Gilbert S Omenn, Shyam Visweswaran, John H Holmes, Zongqi Xia, Gabriel A Brat, Shawn N Murphy
Distinguishing Admissions Specifically for COVID-19 From Incidental SARS-CoV-2 Admissions: National Retrospective Electronic Health Record Study. Journal of medical Internet research 24 (5) (2022)
Jeffrey G Klann, Hossein Estiri, Griffin M Weber, Bertrand Moal, Paul Avillach, Chuan Hong, Amelia Li Min Tan, Brett K Beaulieu-Jones, Victor Castro, Thomas Maulhardt, Alon Geva, Alberto Malovini, Andrew Michael South, Shyam Visweswaran, Michele M Morris, Malarkodi J Samayamuthu, Gilbert S Omenn, Kee-Yuan Ngiam, Kenneth D Mandl, Martin Boeker, Karen L Olson, Danielle L Mowery, Robert W Follett, David A Hanauer, Riccardo Bellazzi, Jason H Moore, Ne Hooi Will Loh, Douglas S Bell, Kavishwar B Wagholikar, Luca Chiovato, Valentina Tibollo, Siegbert Rieg, Anthony L L J Li, Vianney Jouhet, Emily Schriver, Zongqi Xia, Meghan Hutch, Yuan Luo, Isaac S Kohane, null null, Gabriel A Brat, Shawn N Murphy
Validation of an internationally derived patient severity phenotype to support COVID-19 analytics from electronic health record data. Journal of the American Medical Informatics Association : JAMIA 28 (7) (2021)
Chengxin Zhang, Wei Zheng, Micah Cheng, Gilbert S Omenn, Peter L Freddolino, Yang Zhang
Functions of Essential Genes and a Scale-Free Protein Interaction Network Revealed by Structure-Based Function and Interaction Prediction for a Minimal Genome. Journal of proteome research 20 (2) (2021)
Xiaoqiang Huang, Robin Pearce, Gilbert S Omenn, Yang Zhang
Identification of 13 Guanidinobenzoyl- or Aminidinobenzoyl-Containing Drugs to Potentially Inhibit TMPRSS2 for COVID-19 Treatment. International journal of molecular sciences 22 (13) (2021)
Isaac S Kohane, Bruce J Aronow, Paul Avillach, Brett K Beaulieu-Jones, Riccardo Bellazzi, Robert Louis Bradford, Gabriel A Brat, Mario Cannataro, James J Cimino, Noelia García Barrio, Nils Gehlenborg, Marzyeh Ghassemi, Alba Gutierrez-Sacristan, David A Hanauer, John H Holmes, Chuan Hong, Jeffrey G Klann, Ne Hooi Will Loh, Yuan Luo, Kenneth D Mandl, Mohamad Daniar, Jason H Moore, Shawn N Murphy, Antoine Neuraz, Kee-Yuan Ngiam, Gilbert S Omenn, Nathan P Palmer, Lav P Patel, Miguel Pedrera Jiménez, Piotr Sliz, Andrew Michael South, Amelia Li Min Tan, Deanne M Taylor, Bradley W Taylor, Carlo Torti, Andrew K Vallejos, Kavishwar B Wagholikar, null null, Griffin M Weber, Tianxi Cai
What Every Reader Should Know About Studies Using Electronic Health Record Data but May Be Afraid to Ask. Journal of medical Internet research 23 (3) (2021)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Young-Ki Paik, Ileana M Cristea, Fernando José Corrales, Cecilia Lindskog, Susan T Weintraub, Michael H A Roehrl, Siqi Liu, Nuno Bandeira, Sudhir Srivastava, Yi-Ju Chen, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
Progress Identifying and Analyzing the Human Proteome: 2021 Metrics from the HUPO Human Proteome Project. Journal of proteome research 20 (12) (2021)
Griffin M Weber, Harrison G Zhang, Sehi L' Yi, Clara-Lea Bonzel, Chuan Hong, Paul Avillach, Alba Gutierrez-Sacristan, Nathan P Palmer, Amelia Li Min Tan, Xuan Wang, William Yuan, Nils Gehlenborg, Anna Alloni, Danilo F Amendola, Antonio Bellasi, Riccardo Bellazzi, Michele Beraghi, Mauro Bucalo, Luca Chiovato, Kelly Cho, Arianna Dagliati, Hossein Estiri, Robert W Follett, Noelia García Barrio, David A Hanauer, Darren W Henderson, Yuk-Lam Anne Ho, John H Holmes, Meghan R Hutch, Ramakanth Kavuluru, Katie Kirchoff, Jeffrey G Klann, Ashok K Krishnamurthy, Trang T Le, Molei Liu, Ne Hooi Will Loh, Sara Lozano-Zahonero, Yuan Luo, Sarah E Maidlow, Adeline Makoudjou, Alberto Malovini, Marcelo Roberto Martins, Bertrand Moal, Michele M Morris, Danielle L Mowery, Shawn N Murphy, Antoine Neuraz, Kee-Yuan Ngiam, Marina Politi Okoshi, Gilbert S Omenn, Lav P Patel, Miguel Pedrera Jiménez, Robson Aparecido Prudente, Malarkodi Jebathilagam Samayamuthu, Fernando J Sanz Vidorreta, Emily R Schriver, Petra Schubert, Pablo Serrano Balazote, Byorn W L Tan, Suzana Erico Tanni, Valentina Tibollo, Shyam Visweswaran, Kavishwar B Wagholikar, Zongqi Xia, Daniela Zöller, null null, Isaac S Kohane, Tianxi Cai, Andrew Michael South, Gabriel A Brat
International Changes in COVID-19 Clinical Trajectories Across 315 Hospitals and 6 Countries: Retrospective Cohort Study. Journal of medical Internet research 23 (10) (2021)
Griffin M Weber, Harrison G Zhang, Sehi L' Yi, Clara-Lea Bonzel, Chuan Hong, Paul Avillach, Alba Gutierrez-Sacristan, Nathan P Palmer, Amelia Li Min Tan, Xuan Wang, William Yuan, Nils Gehlenborg, Anna Alloni, Danilo F Amendola, Antonio Bellasi, Riccardo Bellazzi, Michele Beraghi, Mauro Bucalo, Luca Chiovato, Kelly Cho, Arianna Dagliati, Hossein Estiri, Robert W Follett, Noelia García Barrio, David A Hanauer, Darren W Henderson, Yuk-Lam Anne Ho, John H Holmes, Meghan R Hutch, Ramakanth Kavuluru, Katie Kirchoff, Jeffrey G Klann, Ashok K Krishnamurthy, Trang T Le, Molei Liu, Ne Hooi Will Loh, Sara Lozano-Zahonero, Yuan Luo, Sarah E Maidlow, Adeline Makoudjou, Alberto Malovini, Marcelo Roberto Martins, Bertrand Moal, Michele M Morris, Danielle L Mowery, Shawn N Murphy, Antoine Neuraz, Kee-Yuan Ngiam, Marina Politi Okoshi, Gilbert S Omenn, Lav P Patel, Miguel Pedrera Jiménez, Robson Aparecido Prudente, Malarkodi Jebathilagam Samayamuthu, Fernando J Sanz Vidorreta, Emily R Schriver, Petra Schubert, Pablo Serrano Balazote, Byorn W L Tan, Suzana Erico Tanni, Valentina Tibollo, Shyam Visweswaran, Kavishwar B Wagholikar, Zongqi Xia, Daniela Zöller, null null, Isaac S Kohane, Tianxi Cai, Andrew Michael South, Gabriel A Brat
Authorship Correction: International Changes in COVID-19 Clinical Trajectories Across 315 Hospitals and 6 Countries: Retrospective Cohort Study. Journal of medical Internet research 23 (11) (2021)
Eric W Deutsch, Gilbert S Omenn, Zhi Sun, David H Baxter, Maria Pernemalm, Krishnan K Palaniappan, Natasha Letunica, Yves Vandenbrouck, Virginie Brun, Sheng-Ce Tao, Xiaobo Yu, Philipp E Geyer, Vera Ignjatovic, Robert L Moritz, Jochen M Schwenk
Advances and Utility of the Human Plasma Proteome. Journal of proteome research 20 (12) (2021)
Subash Adhikari, Edouard C Nice, Eric W Deutsch, Lydie Lane, Gilbert S Omenn, Stephen R Pennington, Young-Ki Paik, Christopher M Overall, Fernando J Corrales, Ileana M Cristea, Jennifer E Van Eyk, Mathias Uhlen, Cecilia Lindskog, Daniel W Chan, Amos Bairoch, James C Waddington, Joshua L Justice, Joshua LaBaer, Henry Rodriguez, Fuchu He, Markus Kostrzewa, Peipei Ping, Rebekah L Gundry, Peter Stewart, Sanjeeva Srivastava, Sudhir Srivastava, Fabio C S Nogueira, Gilberto B Domont, Yves Vandenbrouck, Maggie P Y Lam, Sara Wennersten, Juan Antonio Vizcaino, Marc R Wilkins, Jochen M Schwenk, Emma Lundberg, Nuno Bandeira, Gyorgy Marko-Varga, Susan T Weintraub, Charles Pineau, Ulrike Kusebauch, Robert L Moritz, Seong Beom Ahn, Magnus Palmblad, Michael Paul Snyder, Ruedi Aebersold, Mark S Baker
A high-stringency blueprint of the human proteome. Nature communications 11 (1) (2020)
Gabriel A Brat, Griffin M Weber, Nils Gehlenborg, Paul Avillach, Nathan P Palmer, Luca Chiovato, James J Cimino, Lemuel R Waitman, Gilbert S Omenn, Alberto Malovini, Jason H Moore, Brett K Beaulieu-Jones, Valentina Tibollo, Shawn N Murphy, Sehi L' Yi, Mark S Keller, Riccardo Bellazzi, David A Hanauer, Arnaud Serret-Larmande, Alba Gutierrez-Sacristan, John J Holmes, Douglas S Bell, Kenneth D Mandl, Robert W Follett, Jeffrey G Klann, Douglas A Murad, Luigia Scudeller, Mauro Bucalo, Katie Kirchoff, Jean Craig, Jihad S Obeid, Vianney Jouhet, Romain Griffier, Sebastien Cossin, Bertrand Moal, Lav P Patel, Antonio Bellasi, Hans U Prokosch, Detlef Kraska, Piotr Sliz, Amelia Li Min Tan, Kee-Yuan Ngiam, Alberto Zambelli, Danielle L Mowery, Emily Schiver, Batsal Devkota, Robert Louis Bradford, Mohamad Daniar, Christel Daniel, Vincent Benoit, Romain Bey, Nicolas Paris, Patricia Serre, Nina Orlova, Julien Dubiel, Martin Hilka, Anne Sophie Jannot, Stephane Breant, Judith Leblanc, Nicolas Griffon, Anita Burgun, Melodie Bernaux, Arnaud Sandrin, Elisa Salamanca, Sylvie Cormont, Thomas Ganslandt, Tobias Gradinger, Julien Champ, Martin Boeker, Patricia Martel, Loic Esteve, Alexandre Gramfort, Olivier Grisel, Damien Leprovost, Thomas Moreau, Gael Varoquaux, Jill-Jênn Vie, Demian Wassermann, Arthur Mensch, Charlotte Caucheteux, Christian Haverkamp, Guillaume Lemaitre, Silvano Bosari, Ian D Krantz, Andrew Michael South, Tianxi Cai, Isaac S Kohane
International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium. NPJ digital medicine 3 (2020)
Young-Ki Paik, Christopher M Overall, Fernando José Corrales, Eric W Deutsch, Lydie Lane, Gilbert S Omenn
Advances in Identifying and Characterizing the Human Proteome. Journal of proteome research 18 (12) (2020)
Michael R Hoopmann, Ulrike Kusebauch, Magnus Palmblad, Nuno Bandeira, David D Shteynberg, Lingjie He, Bin Xia, Stoyan H Stoychev, Gilbert S Omenn, Susan T Weintraub, Robert L Moritz
Insights from the First Phosphopeptide Challenge of the MS Resource Pillar of the HUPO Human Proteome Project. Journal of proteome research 19 (12) (2020)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Ileana M Cristea, Fernando José Corrales, Cecilia Lindskog, Young-Ki Paik, Jennifer E Van Eyk, Siqi Liu, Stephen R Pennington, Michael P Snyder, Mark S Baker, Nuno Bandeira, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
Research on the Human Proteome Reaches a Major Milestone: >90% of Predicted Human Proteins Now Credibly Detected, According to the HUPO Human Proteome Project. Journal of proteome research 19 (12) (2020)
Michael Wainberg, Andrew T Magis, John C Earls, Jennifer C Lovejoy, Nasa Sinnott-Armstrong, Gilbert S Omenn, Leroy E Hood, Nathan D Price
Multiomic blood correlates of genetic risk identify presymptomatic disease alterations. Proceedings of the National Academy of Sciences of the United States of America 117 (35) (2020)
Xiaoqiang Huang, Chengxin Zhang, Robin Pearce, Gilbert S Omenn, Yang Zhang
Identifying the Zoonotic Origin of SARS-CoV-2 by Modeling the Binding Affinity between the Spike Receptor-Binding Domain and Host ACE2. Journal of proteome research 19 (12) (2020)
Young-Ki Paik, Christopher M Overall, Fernando Corrales, Eric W Deutsch, Lydie Lane, Gilbert S Omenn
Toward Completion of the Human Proteome Parts List: Progress Uncovering Proteins That Are Missing or Have Unknown Function and Developing Analytical Methods. Journal of proteome research 17 (12) (2019)
Chengxin Zhang, Lydie Lane, Gilbert S Omenn, Yang Zhang
Blinded Testing of Function Annotation for uPE1 Proteins by I-TASSER/COFACTOR Pipeline Using the 2018-2019 Additions to neXtProt and the CAFA3 Challenge. Journal of proteome research 18 (12) (2019)
Vera Ignjatovic, Philipp E Geyer, Krishnan K Palaniappan, Jessica E Chaaban, Gilbert S Omenn, Mark S Baker, Eric W Deutsch, Jochen M Schwenk
Mass Spectrometry-Based Plasma Proteomics: Considerations from Sample Collection to Achieving Translational Data. Journal of proteome research 18 (12) (2019)
Yong Zhou, Shizhen Qin, Mingjuan Sun, Li Tang, Xiaowei Yan, Taek-Kyun Kim, Juan Caballero, Gustavo Glusman, Mary E Brunkow, Mark J Soloski, Alison W Rebman, Carol Scavarda, Denise Cooper, Gilbert S Omenn, Robert L Moritz, Gary P Wormser, Nathan D Price, John N Aucott, Leroy Hood
Measurement of Organ-Specific and Acute-Phase Blood Protein Levels in Early Lyme Disease. Journal of proteome research 19 (1) (2019)
Eric W Deutsch, Lydie Lane, Christopher M Overall, Nuno Bandeira, Mark S Baker, Charles Pineau, Robert L Moritz, Fernando José Corrales, Sandra E Orchard, Jennifer E Van Eyk, Young-Ki Paik, Susan T Weintraub, Yves Vandenbrouck, Gilbert S Omenn
Human Proteome Project Mass Spectrometry Data Interpretation Guidelines 3.0. Journal of proteome research 18 (12) (2019)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Fernando J Corrales, Jochen M Schwenk, Young-Ki Paik, Jennifer E Van Eyk, Siqi Liu, Stephen Pennington, Michael P Snyder, Mark S Baker, Eric W Deutsch
Progress on Identifying and Characterizing the Human Proteome: 2019 Metrics from the HUPO Human Proteome Project. Journal of proteome research 18 (12) (2019)
Young-Ki Paik, Lydie Lane, Takeshi Kawamura, Yu-Ju Chen, Je-Yoel Cho, Joshua LaBaer, Jong Shin Yoo, Gilberto Barbosa Domont, Fernando José Corrales, Gilbert S Omenn, Alexander Archakov, Sergio Encarnación-Guevara, Siqi Liu, Ghasem Hosseini Salekdeh, Jin-Young Cho, Chae-Yeon Kim, Christopher M Overall
Launching the C-HPP neXt-CP50 Pilot Project for Functional Characterization of Identified Proteins with No Known Function. Journal of proteome research 17 (12) (2018)
Chengxin Zhang, Xiaoqiong Wei, Gilbert S Omenn, Yang Zhang
Structure and Protein Interaction-Based Gene Ontology Annotations Reveal Likely Functions of Uncharacterized Proteins on Human Chromosome 17. Journal of proteome research 17 (12) (2018)
Omer Siddiqui, Hongjiu Zhang, Yuanfang Guan, Gilbert S Omenn
Chromosome 17 Missing Proteins: Recent Progress and Future Directions as Part of the neXt-MP50 Challenge. Journal of proteome research 17 (12) (2018)
Young-Ki Paik, Christopher M Overall, Eric W Deutsch, Jennifer E Van Eyk, Gilbert S Omenn
Progress and Future Direction of Chromosome-Centric Human Proteome Project. Journal of proteome research 16 (12) (2018)
Gilbert S Omenn, Lydie Lane, Christopher M Overall, Fernando José Corrales, Jochen M Schwenk, Young-Ki Paik, Jennifer E Van Eyk, Siqi Liu, Michael Snyder, Mark S Baker, Eric W Deutsch
Progress on Identifying and Characterizing the Human Proteome: 2018 Metrics from the HUPO Human Proteome Project. Journal of proteome research 17 (12) (2018)
Gilbert S Omenn, Lydie Lane, Emma K Lundberg, Christopher M Overall, Eric W Deutsch
Progress on the HUPO Draft Human Proteome: 2017 Metrics of the Human Proteome Project. Journal of proteome research 16 (12) (2017)
Keun Na, Heon Shin, Jin-Young Cho, Sang Hee Jung, Jaeseung Lim, Jong-Sun Lim, Eun Ah Kim, Hye Sun Kim, Ah Reum Kang, Ji Hye Kim, Jeong Min Shin, Seul-Ki Jeong, Chae-Yeon Kim, Jun Young Park, Hyung-Min Chung, Gilbert S Omenn, William S Hancock, Young-Ki Paik
Systematic Proteogenomic Approach To Exploring a Novel Function for NHERF1 in Human Reproductive Disorder: Lessons for Exploring Missing Proteins. Journal of proteome research 16 (12) (2017)
Jochen M Schwenk, Gilbert S Omenn, Zhi Sun, David S Campbell, Mark S Baker, Christopher M Overall, Ruedi Aebersold, Robert L Moritz, Eric W Deutsch
The Human Plasma Proteome Draft of 2017: Building on the Human Plasma PeptideAtlas from Mass Spectrometry and Complementary Assays. Journal of proteome research 16 (12) (2017)

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Gilbert S Omenn