Stefano Mangiola (S Mangiola)

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 18

Top Topics

Endometrial Cancer

Radical Prostatectomy

Top Venues

bioRxiv : the preprint server for biology

Prostate cancer and prostatic diseases

Proceedings of the National Academy of Sciences of the United States of America

This page only lists publications with an associated author ORCID identifier.

Publications

William J Hutchison, Timothy J Keyes, null null, Helena Lucia Crowell, Jacques Serizay, Charlotte Soneson, Eric S Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton, Abdullah Al Nahid, Miha Kosmac, Quentin Clayssen, Victor Yuan, Wancen Mu, Ji-Eun Park, Izabela Mamede C A da Conceição, Min Hyung Ryu, Pierre-Paul Axisa, Paulina Paiz, Chi-Lam Poon, Ming Tang, Raphaël Gottardo, Martin Morgan, Stuart Lee, Michael Lawrence, Stephanie C Hicks, Garry P Nolan, Kara L Davis, Anthony T Papenfuss, Michael I Love, Stefano Mangiola
The tidyomics ecosystem: enhancing omic data analyses. Nature methods 21 (7) (2024)
Stefano Mangiola, M Milton, N Ranathunga, Connie Li Wai Suen, A Odainic, E Yang, W Hutchison, Alexandra L Garnham, J Iskander, Bhupinder Pal, Vijay K Yadav, Fernando J Rossello, Vincent J Carey, Martin Morgan, Sammy Bedoui, Axel Kallies, Anthony T Papenfuss
A multi-organ map of the human immune system across age, sex and ethnicity. bioRxiv : the preprint server for biology (2024)
William J Hutchison, Timothy J Keyes, null null, Helena Lucia Crowell, Jacques Serizay, Charlotte Soneson, Eric S Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton, Abdullah Al Nahid, Miha Kosmac, Quentin Clayssen, Victor Yuan, Wancen Mu, Ji-Eun Park, Izabela Mamede C A da Conceição, Min Hyung Ryu, Pierre-Paul Axisa, Paulina Paiz, Chi-Lam Poon, Ming Tang, Raphaël Gottardo, Martin Morgan, Stuart Lee, Michael Lawrence, Stephanie C Hicks, Garry P Nolan, Kara L Davis, Anthony T Papenfuss, Michael I Love, Stefano Mangiola
The tidyomics ecosystem: enhancing omic data analyses. Nature methods (2024)
William J Hutchison, Timothy J Keyes, null null, Helena Lucia Crowell, Jacques Serizay, Charlotte Soneson, Eric S Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton, Abdullah Al Nahid, Miha Kosmac, Quentin Clayssen, Victor Yuan, Wancen Mu, Ji-Eun Park, Izabela Mamede, Min Hyung Ryu, Pierre-Paul Axisa, Paulina Paiz, Chi-Lam Poon, Ming Tang, Raphaël Gottardo, Martin Morgan, Stuart Lee, Michael Lawrence, Stephanie C Hicks, Garry P Nolan, Kara L Davis, Anthony T Papenfuss, Michael I Love, Stefano Mangiola
The tidyomics ecosystem: Enhancing omic data analyses. bioRxiv : the preprint server for biology (2024)
William J Hutchison, Timothy J Keyes, null null, Helena Lucia Crowell, Jacques Serizay, Charlotte Soneson, Eric S Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton, Abdullah Al Nahid, Miha Kosmac, Quentin Clayssen, Victor Yuan, Wancen Mu, Ji-Eun Park, Izabela Mamede, Min Hyung Ryu, Pierre-Paul Axisa, Paulina Paiz, Chi-Lam Poon, Ming Tang, Raphaël Gottardo, Martin Morgan, Stuart Lee, Michael Lawrence, Stephanie C Hicks, Garry P Nolan, Kara L Davis, Anthony T Papenfuss, Michael I Love, Stefano Mangiola
The tidyomics ecosystem: Enhancing omic data analyses. bioRxiv : the preprint server for biology (2024)
William J Hutchison, Timothy J Keyes, null null, Helena Lucia Crowell, Jacques Serizay, Charlotte Soneson, Eric S Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton, Abdullah Al Nahid, Miha Kosmac, Quentin Clayssen, Victor Yuan, Wancen Mu, Ji-Eun Park, Izabela Mamede C A da Conceição, Min Hyung Ryu, Pierre-Paul Axisa, Paulina Paiz, Chi-Lam Poon, Ming Tang, Raphaël Gottardo, Martin Morgan, Stuart Lee, Michael Lawrence, Stephanie C Hicks, Garry P Nolan, Kara L Davis, Anthony T Papenfuss, Michael I Love, Stefano Mangiola
The tidyomics ecosystem: enhancing omic data analyses. Nature methods (2024)
Stefano Mangiola, M Milton, N Ranathunga, Connie Li Wai Suen, A Odainic, E Yang, W Hutchison, Alexandra L Garnham, J Iskander, Bhupinder Pal, Vijay K Yadav, Fernando J Rossello, Vincent J Carey, Martin Morgan, Sammy Bedoui, Axel Kallies, Anthony T Papenfuss
A multi-organ map of the human immune system across age, sex and ethnicity. bioRxiv : the preprint server for biology (2024)
William J Hutchison, Timothy J Keyes, null null, Helena Lucia Crowell, Jacques Serizay, Charlotte Soneson, Eric S Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton, Abdullah Al Nahid, Miha Kosmac, Quentin Clayssen, Victor Yuan, Wancen Mu, Ji-Eun Park, Izabela Mamede C A da Conceição, Min Hyung Ryu, Pierre-Paul Axisa, Paulina Paiz, Chi-Lam Poon, Ming Tang, Raphaël Gottardo, Martin Morgan, Stuart Lee, Michael Lawrence, Stephanie C Hicks, Garry P Nolan, Kara L Davis, Anthony T Papenfuss, Michael I Love, Stefano Mangiola
The tidyomics ecosystem: enhancing omic data analyses. Nature methods 21 (7) (2024)
William J Hutchison, Timothy J Keyes, null null, Helena Lucia Crowell, Jacques Serizay, Charlotte Soneson, Eric S Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton, Abdullah Al Nahid, Miha Kosmac, Quentin Clayssen, Victor Yuan, Wancen Mu, Ji-Eun Park, Izabela Mamede, Min Hyung Ryu, Pierre-Paul Axisa, Paulina Paiz, Chi-Lam Poon, Ming Tang, Raphaël Gottardo, Martin Morgan, Stuart Lee, Michael Lawrence, Stephanie C Hicks, Garry P Nolan, Kara L Davis, Anthony T Papenfuss, Michael I Love, Stefano Mangiola
The tidyomics ecosystem: Enhancing omic data analyses. bioRxiv : the preprint server for biology (2024)
William J Hutchison, Timothy J Keyes, null null, Helena Lucia Crowell, Jacques Serizay, Charlotte Soneson, Eric S Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton, Abdullah Al Nahid, Miha Kosmac, Quentin Clayssen, Victor Yuan, Wancen Mu, Ji-Eun Park, Izabela Mamede, Min Hyung Ryu, Pierre-Paul Axisa, Paulina Paiz, Chi-Lam Poon, Ming Tang, Raphaël Gottardo, Martin Morgan, Stuart Lee, Michael Lawrence, Stephanie C Hicks, Garry P Nolan, Kara L Davis, Anthony T Papenfuss, Michael I Love, Stefano Mangiola
The tidyomics ecosystem: Enhancing omic data analyses. bioRxiv : the preprint server for biology (2024)
William J Hutchison, Timothy J Keyes, null null, Helena Lucia Crowell, Jacques Serizay, Charlotte Soneson, Eric S Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton, Abdullah Al Nahid, Miha Kosmac, Quentin Clayssen, Victor Yuan, Wancen Mu, Ji-Eun Park, Izabela Mamede, Min Hyung Ryu, Pierre-Paul Axisa, Paulina Paiz, Chi-Lam Poon, Ming Tang, Raphaël Gottardo, Martin Morgan, Stuart Lee, Michael Lawrence, Stephanie C Hicks, Garry P Nolan, Kara L Davis, Anthony T Papenfuss, Michael I Love, Stefano Mangiola
The tidyomics ecosystem: Enhancing omic data analyses. bioRxiv : the preprint server for biology (2024)
Stefano Mangiola, M Milton, N Ranathunga, Connie Li Wai Suen, A Odainic, E Yang, W Hutchison, Alexandra L Garnham, J Iskander, Bhupinder Pal, Vijay K Yadav, Fernando J Rossello, Vincent J Carey, Martin Morgan, Sammy Bedoui, Axel Kallies, Anthony T Papenfuss
A multi-organ map of the human immune system across age, sex and ethnicity. bioRxiv : the preprint server for biology (2024)
Stefano Mangiola, Alexandra J Roth-Schulze, Marie Trussart, Enrique Zozaya-Valdés, Mengyao Ma, Zijie Gao, Alan F Rubin, Terence P Speed, Heejung Shim, Anthony T Papenfuss
sccomp: Robust differential composition and variability analysis for single-cell data. Proceedings of the National Academy of Sciences of the United States of America 120 (33) (2023)
Parminder Singh, Kishore Gollapalli, Stefano Mangiola, Daniela Schranner, Mohd Aslam Yusuf, Manish Chamoli, Sting L Shi, Bruno Lopes-Bastos, Tripti Nair, Annett Riermeier, Elena M Vayndorf, Judy Z Wu, Aishwarya Nilakhe, Christina Q Nguyen, Michael Muir, Michael G Kiflezghi, Anna Foulger, Alex Junker, Jack Devine, Kunal Sharan, Shankar J Chinta, Swati Rajput, Anand Rane, Philipp Baumert, Martin Schönfelder, Francescopaolo Iavarone, Giorgia di Lorenzo, Swati Kumari, Alka Gupta, Rajesh Sarkar, Costerwell Khyriem, Amanpreet S Chawla, Ankur Sharma, Nazan Sarper, Sanjeev K Kanojiya, Bichitra Kumar Biswal, Carmine Settembre, Nagarajan Perumal, Kimara L Targoff, Martin Picard, Sarika Gupta, Vidya Velagapudi, Anthony T Papenfuss, Alaattin Kaya, Miguel Godinho Ferreira, Brian Keith Kennedy, Julie K Andersen, Gordon J Lithgow, Abdullah Mahmood Ali, Arnab Mukhopadhyay, Aarno Palotie, Gabi Kastenmüller, Matt Kaeberlein, Henning Wackerhage, Bhupinder Pal, Vijay K Yadav
Taurine deficiency as a driver of aging. Science (New York, N.Y.) 380 (6649) (2023)
Patrick McCoy, Stefano Mangiola, Geoff Macintyre, Ryan Hutchinson, Ben Tran, Bernard J Pope, Peter Georgeson, Matthew K H Hong, Natalie Kurganovs, Sebastian Lunke, Michael J Clarkson, Marek Cmero, Michael Kerger, Ryan Stuchbery, Ken Chow, Izhak Haviv, Andrew Ryan, Anthony J Costello, Niall M Corcoran, Christopher M Hovens
MSH2-deficient prostate tumours have a distinct immune response and clinical outcome compared to MSH2-deficient colorectal or endometrial cancer. Prostate cancer and prostatic diseases 24 (4) (2021)
Jean Berthelet, Verena C Wimmer, Holly J Whitfield, Antonin Serrano, Thomas Boudier, Stefano Mangiola, Michal Merdas, Farrah El-Saafin, David Baloyan, Jordan Wilcox, Steven Wilcox, Adam C Parslow, Anthony T Papenfuss, Belinda Yeo, Matthias Ernst, Bhupinder Pal, Robin L Anderson, Melissa J Davis, Kelly L Rogers, Frédéric Hollande, Delphine Merino
The site of breast cancer metastases dictates their clonal composition and reversible transcriptomic profile. Science advances 7 (28) (2021)
Stefano Mangiola, Evan A Thomas, Martin Modrák, Aki Vehtari, Anthony T Papenfuss
Probabilistic outlier identification for RNA sequencing generalized linear models. NAR genomics and bioinformatics 3 (1) (2021)
Emily J Lelliott, Stefano Mangiola, Kelly M Ramsbottom, Magnus Zethoven, Lydia Lim, Peter Kar Han Lau, Amanda J Oliver, Luciano G Martelotto, Laura Kirby, Claire Martin, Riyaben P Patel, Alison Slater, Carleen Cullinane, Anthony T Papenfuss, Nicole M Haynes, Grant A McArthur, Jane Oliaro, Karen E Sheppard
Combined BRAF, MEK, and CDK4/6 Inhibition Depletes Intratumoral Immune-Potentiating Myeloid Populations in Melanoma. Cancer immunology research 9 (2) (2020)