Thomas Leitner

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 16

Top Venues

Viruses

Molecular biology and evolution

PLoS computational biology

Proceedings of the National Academy of Sciences of the United States of America

Los Alamos National Laboratory

Karolinska Institutet (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Los Alamos National Laboratory

United States

Staff Scientist :: Theoretical Biology & Biophysics

Education History

Karolinska Institutet

Sweden

PHD

Publications

Qianying Lin, Emma E Goldberg, Thomas Leitner, Carmen Molina-París, Aaron A King, Ethan Obie Romero-Severson
The Number and Pattern of Viral Genomic Reassortments are not Necessarily Identifiable from Segment Trees. Molecular biology and evolution 41 (6) (2024)
Qianying Lin, Emma E Goldberg, Thomas Leitner, Carmen Molina-París, Aaron A King, Ethan Obie Romero-Severson
The Number and Pattern of Viral Genomic Reassortments are not Necessarily Identifiable from Segment Trees. Molecular biology and evolution 41 (6) (2024)
Qianying Lin, Emma E Goldberg, Thomas Leitner, Carmen Molina-París, Aaron A King, Ethan Obie Romero-Severson
The Number and Pattern of Viral Genomic Reassortments are not Necessarily Identifiable from Segment Trees. Molecular biology and evolution 41 (6) (2024)
Qianying Lin, Emma E Goldberg, Thomas Leitner, Carmen Molina-París, Aaron A King, Ethan Obie Romero-Severson
The Number and Pattern of Viral Genomic Reassortments are not Necessarily Identifiable from Segment Trees. Molecular biology and evolution 41 (6) (2024)
Mariantonietta Di Stefano, Giuseppina Faleo, Thomas Leitner, Wei Zheng, Yang Zhang, Amna Hassan, Marwan J Alwazzeh, Josè R Fiore, Mona H Ismail, Teresa Antonia Santantonio
Molecular and Genetic Characterization of Hepatitis B Virus (HBV) among Saudi Chronically HBV-Infected Individuals. Viruses 15 (2) (2023)
Qianying Lin, Emma E Goldberg, Thomas Leitner, Carmen Molina-París, Aaron A King, Ethan Obie Romero-Severson
Modeling the evolution of segment trees reveals deficiencies in current inferential methods for genomic reassortment. bioRxiv : the preprint server for biology (2023)
Mariantonietta Di Stefano, Giuseppina Faleo, Thomas Leitner, Wei Zheng, Yang Zhang, Amna Hassan, Marwan J Alwazzeh, Josè R Fiore, Mona H Ismail, Teresa Antonia Santantonio
Molecular and Genetic Characterization of Hepatitis B Virus (HBV) among Saudi Chronically HBV-Infected Individuals. Viruses 15 (2) (2023)
Michael D Kupperman, Thomas Leitner, Ruian Ke
A deep learning approach to real-time HIV outbreak detection using genetic data. PLoS computational biology 18 (10) (2022)
Erik Lundgren, Ethan Romero-Severson, Jan Albert, Thomas Leitner
Combining biomarker and virus phylogenetic models improves HIV-1 epidemiological source identification. PLoS computational biology 18 (8) (2022)
Mariantonietta Di Stefano, Mona H Ismail, Thomas Leitner, Giuseppina Faleo, Saada A Elmnan Adem, Mohamed O M E Elamin, Obeidi Eltreifi, Marwan J Alwazzeh, Jose R Fiore, Teresa A Santantonio
Genetic Subtypes and Natural Resistance Mutations in HCV Genotype 4 Infected Saudi Arabian Patients. Viruses 13 (9) (2021)
Arshan Nasir, Mira Dimitrijevic, Ethan Romero-Severson, Thomas Leitner
Large Evolutionary Rate Heterogeneity among and within HIV-1 Subtypes and CRFs. Viruses 13 (9) (2021)
Carla N Mavian, Sergei Kosakovsky Pond, Simone Marini, Brittany Rife Magalis, Anne-Mieke Vandamme, Simon Dellicour, Samuel V Scarpino, Charlotte J Houldcroft, Julian Villabona-Arenas, Taylor K Paisie, Nídia Sequeira Trovão, Christina Boucher, Yun Zhang, Richard H Scheuermann, Olivier Gascuel, Tommy Tsan-Yuk Lam, Marc A Suchard, Ana Abecasis, Eduan Wilkinson, Tulio de Oliveira, Ana I Bento, Heiko A Schmidt, Darren Martin, James Hadfield, Nuno Faria, Nathan D Grubaugh, Richard A Neher, Guy Baele, Philippe Lemey, Tanja Stadler, Jan Albert, Keith A Crandall, Thomas Leitner, Alexandros Stamatakis, Mattia A Prosperi, Marco Salemi
Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable. Proceedings of the National Academy of Sciences of the United States of America 117 (23) (2020)
Yunjun Zhang, Thomas Leitner, Jan Albert, Tom Britton
Inferring transmission heterogeneity using virus genealogies: Estimation and targeted prevention. PLoS computational biology 16 (9) (2020)
Ethan Romero-Severson, Arshan Nasir, Thomas Leitner
What Should Health Departments Do with HIV Sequence Data? Viruses 12 (9) (2020)
Thomas Leitner, Ethan Romero-Severson
Phylogenetic patterns recover known HIV epidemiological relationships and reveal common transmission of multiple variants. Nature microbiology 3 (9) (2018)
Ethan Obie Romero-Severson, Ingo Bulla, Nick Hengartner, Inês Bártolo, Ana Abecasis, José M Azevedo-Pereira, Nuno Taveira, Thomas Leitner
Donor-Recipient Identification in Para- and Poly-phyletic Trees Under Alternative HIV-1 Transmission Hypotheses Using Approximate Bayesian Computation. Genetics 207 (3) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Thomas Leitner