Traver Hart

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 25

Top Venues

Nucleic acids research

Nature communications

Proceedings of the National Academy of Sciences of the United States of America

bioRxiv : the preprint server for biology

University of Texas MD Anderson Cancer Center

University of Texas at Austin (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Texas MD Anderson Cancer Center Feb 29 2016

United States

Assistant Professor :: Department of Bioinformatics & Computational Biology

Education History

University of Texas at Austin

United States

PHD

Publications

Nazanin Esmaeili Anvar, Chenchu Lin, Xingdi Ma, Lori L Wilson, Ryan Steger, Annabel K Sangree, Medina Colic, Sidney H Wang, John G Doench, Traver Hart
Efficient gene knockout and genetic interaction screening using the in4mer CRISPR/Cas12a multiplex knockout platform. Nature communications 15 (1) (2024)
Nazanin Esmaeili Anvar, Chenchu Lin, Xingdi Ma, Lori L Wilson, Ryan Steger, Annabel K Sangree, Medina Colic, Sidney H Wang, John G Doench, Traver Hart
Efficient gene knockout and genetic interaction screening using the in4mer CRISPR/Cas12a multiplex knockout platform. Nature communications 15 (1) (2024)
Xu Feng, Chang Yang, Yuanjian Huang, Dan Su, Chao Wang, Lori Lyn Wilson, Ling Yin, Mengfan Tang, Siting Li, Zhen Chen, Dandan Zhu, Shimin Wang, Shengzhe Zhang, Jie Zhang, Huimin Zhang, Litong Nie, Min Huang, Jae-Il Park, Traver Hart, Dadi Jiang, Kuirong Jiang, Junjie Chen
In vivo CRISPR screens identify Mga as an immunotherapy target in triple-negative breast cancer. Proceedings of the National Academy of Sciences of the United States of America 121 (39) (2024)
Nazanin Esmaeili Anvar, Chenchu Lin, Xingdi Ma, Lori L Wilson, Ryan Steger, Annabel K Sangree, Medina Colic, Sidney H Wang, John G Doench, Traver Hart
Efficient gene knockout and genetic interaction screening using the in4mer CRISPR/Cas12a multiplex knockout platform. Nature communications 15 (1) (2024)
Juihsuan Chou, Nazanin Esmaeili Anvar, Reem Elghaish, Junjie Chen, Traver Hart
Optimal methods for analyzing targeted pairwise knockout screens. bioRxiv : the preprint server for biology (2024)
Nazanin Esmaeili Anvar, Chenchu Lin, Xingdi Ma, Lori L Wilson, Ryan Steger, Annabel K Sangree, Medina Colic, Sidney H Wang, John G Doench, Traver Hart
Efficient gene knockout and genetic interaction screening using the in4mer CRISPR/Cas12a multiplex knockout platform. Nature communications 15 (1) (2024)
Merve Dede, Traver Hart
Recovering false negatives in CRISPR fitness screens with JLOE. Nucleic acids research (2023)
Merve Dede, Traver Hart
Recovering false negatives in CRISPR fitness screens with JLOE. Nucleic acids research 51 (4) (2023)
Merve Dede, Traver Hart
Recovering false negatives in CRISPR fitness screens with JLOE. Nucleic acids research 51 (4) (2023)
Nazanin Esmaeili Anvar, Chenchu Lin, Lori L Wilson, Annabel K Sangree, Xingdi Ma, Medina Colic, John G Doench, Traver Hart
Combined genome-scale fitness and paralog synthetic lethality screens with just 44k clones: the IN4MER CRISPR/Cas12a multiplex knockout platform. bioRxiv : the preprint server for biology (2023)
Merve Dede, Traver Hart
Recovering false negatives in CRISPR fitness screens with JLOE. Nucleic acids research 51 (4) (2023)
Nazanin Esmaeili Anvar, Chenchu Lin, Lori L Wilson, Annabel K Sangree, Xingdi Ma, Medina Colic, John G Doench, Traver Hart
Combined genome-scale fitness and paralog synthetic lethality screens with just 44k clones: the IN4MER CRISPR/Cas12a multiplex knockout platform. bioRxiv : the preprint server for biology (2023)
Lance C Novak, Juihsuan Chou, Medina Colic, Christopher A Bristow, Traver Hart
PICKLES v3: the updated database of pooled in vitro CRISPR knockout library essentiality screens. Nucleic acids research (2022)
Eiru Kim, Lance C Novak, Chenchu Lin, Medina Colic, Lori L Bertolet, Veronica Gheorghe, Christopher A Bristow, Traver Hart
Dynamic rewiring of biological activity across genotype and lineage revealed by context-dependent functional interactions. Genome biology 23 (1) (2022)
Yohei Yoshihama, Kyle A LaBella, Eiru Kim, Lori Bertolet, Medina Colic, Jiexi Li, Xiaoying Shang, Chang-Jiun Wu, Denise J Spring, Y Alan Wang, Traver Hart, Ronald A DePinho
AR-negative prostate cancer is vulnerable to loss of JMJD1C demethylase. Proceedings of the National Academy of Sciences of the United States of America 118 (36) (2022)
Xu Feng, Mengfan Tang, Merve Dede, Dan Su, Guangsheng Pei, Dadi Jiang, Chao Wang, Zhen Chen, Mi Li, Litong Nie, Yun Xiong, Siting Li, Jeong-Min Park, Huimin Zhang, Min Huang, Klaudia Szymonowicz, Zhong-Ming Zhao, Traver Hart, Junjie Chen
Genome-wide CRISPR screens using isogenic cells reveal vulnerabilities conferred by loss of tumor suppressors. Science advances 8 (19) (2022)
Eiru Kim, Traver Hart
Improved analysis of CRISPR fitness screens and reduced off-target effects with the BAGEL2 gene essentiality classifier. Genome medicine 13 (1) (2021)
Walter F Lenoir, Micaela Morgado, Peter C DeWeirdt, Megan McLaughlin, Audrey L Griffith, Annabel K Sangree, Marissa N Feeley, Nazanin Esmaeili Anvar, Eiru Kim, Lori L Bertolet, Medina Colic, Merve Dede, John G Doench, Traver Hart
Discovery of putative tumor suppressors from CRISPR screens reveals rewired lipid metabolism in acute myeloid leukemia cells. Nature communications 12 (1) (2021)
Chan Yeong Kim, Seungbyn Baek, Junha Cha, Sunmo Yang, Eiru Kim, Edward M Marcotte, Traver Hart, Hoyoung Lee
HumanNet v3: an improved database of human gene networks for disease research. Nucleic acids research (2021)
Medina Colic, Traver Hart
Common computational tools for analyzing CRISPR screens. Emerging topics in life sciences (2021)
Chao Wang, Mengfan Tang, Zhen Chen, Litong Nie, Siting Li, Yun Xiong, Klaudia Anna Szymonowicz, Jeong-Min Park, Huimin Zhang, Xu Feng, Min Huang, Dan Su, Traver Hart, Junjie Chen
Genetic vulnerabilities upon inhibition of DNA damage response. Nucleic acids research 49 (14) (2021)
Merve Dede, Megan McLaughlin, Eiru Kim, Traver Hart
Multiplex enCas12a screens detect functional buffering among paralogs otherwise masked in monogenic Cas9 knockout screens. Genome biology 21 (1) (2020)
Rui Wang, Walter F Lenoir, Chao Wang, Dan Su, Megan McLaughlin, Qianghua Hu, Xi Shen, Yanyan Tian, Naeh Klages-Mundt, Erica Lynn, Richard D Wood, Junjie Chen, Traver Hart, Lei Li
DNA polymerase ι compensates for Fanconi anemia pathway deficiency by countering DNA replication stress. Proceedings of the National Academy of Sciences of the United States of America 117 (52) (2020)
Medina Colic, Gang Wang, Michal Zimmermann, Keith Mascall, Megan McLaughlin, Lori Bertolet, W Frank Lenoir, Jason Moffat, Stephane Angers, Daniel Durocher, Traver Hart
Identifying chemogenetic interactions from CRISPR screens with drugZ. Genome medicine 11 (1) (2019)
Eiru Kim, Merve Dede, Walter F Lenoir, Gang Wang, Sanjana Srinivasan, Medina Colic, Traver Hart
A network of human functional gene interactions from knockout fitness screens in cancer cells. Life science alliance 2 (2) (2019)

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Publication Activity (10 Years)

Top Topics

Top Venues

Traver Hart