Tyler S Alioto (Tyler Alioto)

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 13

Top Venues

G3 (Bethesda, Md.)

mSystems

Nature communications

Scientific reports

Centre de Regulació Genòmica

University of California Berkeley (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Centre de Regulació Genòmica

Spain

Team Leader :: CNAG-CRG

Centre de Regulació Genòmica

Spain

Postdoc :: Bioinformatics and Genomics (Guigó group)

Education History

University of California Berkeley

United States

PHD :: Molecular and Cell Biology

Stanford University

United States

BSC :: Biological Sciences

Publications

Marina Marcet-Houben, Fernando Cruz, Jèssica Gómez Garrido, Tyler S Alioto, Juan Carlos Nunez-Rodríguez, Nebai Mesanza, Marta Gut, Eugenia Iturritxa, Toni Gabaldon
Genomics of the expanding pine pathogen Lecanosticta acicola reveals patterns of ongoing genetic admixture. mSystems 9 (3) (2024)
Marina Marcet-Houben, Fernando Cruz, Jèssica Gómez Garrido, Tyler S Alioto, Juan Carlos Nunez-Rodríguez, Nebai Mesanza, Marta Gut, Eugenia Iturritxa, Toni Gabaldon
Genomics of the expanding pine pathogen Lecanosticta acicola reveals patterns of ongoing genetic admixture. mSystems 9 (3) (2024)
Marina Marcet-Houben, Fernando Cruz, Jèssica Gómez Garrido, Tyler S Alioto, Juan Carlos Nunez-Rodríguez, Nebai Mesanza, Marta Gut, Eugenia Iturritxa, Toni Gabaldon
Genomics of the expanding pine pathogen Lecanosticta acicola reveals patterns of ongoing genetic admixture. mSystems (2024)
Marina Marcet-Houben, Fernando Cruz, Jèssica Gómez Garrido, Tyler S Alioto, Juan Carlos Nunez-Rodríguez, Nebai Mesanza, Marta Gut, Eugenia Iturritxa, Toni Gabaldon
Genomics of the expanding pine pathogen Lecanosticta acicola reveals patterns of ongoing genetic admixture. mSystems 9 (3) (2024)
Júlia Castro-Arnau, François Chauvigné, Jèssica Gómez Garrido, Anna Esteve-Codina, Marc Dabad, Tyler S Alioto, Roderick Nigel Finn, Joan Cerdà
Developmental RNA-Seq transcriptomics of haploid germ cells and spermatozoa uncovers novel pathways associated with teleost spermiogenesis. Scientific reports 12 (1) (2022)
Julie Thomy, Frederic Sanchez, Marta Gut, Fernando Cruz, Tyler S Alioto, Gwenael Piganeau, Nigel H Grimsley, Sheree Yau
Combining Nanopore and Illumina Sequencing Permits Detailed Analysis of Insertion Mutations and Structural Variations Produced by PEG-Mediated Transformation in Ostreococcus tauri. Cells 10 (3) (2021)
Isabel Almudi, Joel Vizueta, Christopher D R Wyatt, Alex de Mendoza, Ferdinand Marletaz, Panos N Firbas, Roberto Feuda, Giulio Masiero, Patricia Medina, Ana Alcaina Caro, Fernando Cruz, Jèssica Gómez Garrido, Marta Gut, Tyler S Alioto, Carlos Vargas-Chavez, Kristofer Davie, Bernhard Misof, Josefa González, Stein Aerts, Ryan Lister, Jordi Paps, Julio Rozas, Alejandro Sánchez Gracia, Manuel Irimia, Ignacio Maeso, Fernando Casares
Genomic adaptations to aquatic and aerial life in mayflies and the origin of insect wings. Nature communications 11 (1) (2020)
Jean-Baptiste Ledoux, Fernando Cruz, Jèssica Gómez Garrido, Regina Antoni, Julie Marie Blanc, Daniel Gómez-Gras, Silvija Kipson, Paula López-Sendino, Agostinho Antunes, Cristina Linares, Marta Gut, Tyler S Alioto, Joaquim Garrabou
The Genome Sequence of the Octocoral Paramuricea clavata - A Key Resource To Study the Impact of Climate Change in the Mediterranean. G3 (Bethesda, Md.) 10 (9) (2020)
Tyler S Alioto, Fernando Cruz, Jèssica Gómez Garrido, Miriam Triyatni, Marta Gut, Leonor Frias, Anna Esteve-Codina, Stephan Menne, Anna Kiialainen, Nadine Kumpesa, Fabian Birzele, Roland Schmucki, Ivo G Gut, Olivia Spleiss
The Genome Sequence of the Eastern Woodchuck (Marmota monax) - A Preclinical Animal Model for Chronic Hepatitis B. G3 (Bethesda, Md.) 9 (12) (2019)
Elena Mosca, Fernando Cruz, Jèssica Gómez Garrido, Luca Bianco, Christian Rellstab, Sabine Brodbeck, Katalin Csilléry, Bruno Fady, Matthias Fladung, Barbara Fussi, Dušan Gömöry, Santiago C González-Martínez, Delphine Grivet, Marta Gut, Ole Kim Hansen, Katrin Heer, Zeki Kaya, Konstantin V Krutovsky, Birgit Kersten, Sascha Liepelt, Lars Opgenoorth, Christoph Sperisen, Kristian Karsten Ullrich, Giovanni G Vendramin, Marjana Westergren, Birgit Ziegenhagen, Tyler S Alioto, Felix Gugerli, Berthold Heinze, Mária Höhn, Michela Troggio, David B Neale
A Reference Genome Sequence for the European Silver Fir (Abies alba Mill.): A Community-Generated Genomic Resource. G3 (Bethesda, Md.) 9 (7) (2019)
H Christoph Liedtke, Jèssica Gómez Garrido, Anna Esteve-Codina, Marta Gut, Tyler S Alioto, Gomez-Mestre Ivan
De Novo Assembly and Annotation of the Larval Transcriptome of Two Spadefoot Toads Widely Divergent in Developmental Rate. G3 (Bethesda, Md.) 9 (8) (2019)
Lukas F K Kuderna, Esther Lizano, Eva Julià, Jessica Gomez-Garrido, Aitor Serres-Armero, Martin Kuhlwilm, Regina Antoni Alandes, Marina Alvarez-Estape, David Juan, Simon Charles Heath, Tyler S Alioto, Marta Gut, Ivo Gut, Mikkel Heide Schierup, Òscar Fornas, Tomas Marques-Bonet
Selective single molecule sequencing and assembly of a human Y chromosome of African origin. Nature communications 10 (1) (2019)
Elena Chaves-Pozo, Yulema Valero, Anna Esteve-Codina, Jèssica Gómez Garrido, Marc Dabad, Tyler S Alioto, José Meseguer, María Ángeles Esteban Abad, Alberto Cuesta
Innate Cell-Mediated Cytotoxic Activity of European Sea Bass Leucocytes Against Nodavirus-Infected Cells: A Functional and RNA-seq Study. Scientific reports 7 (1) (2017)
Tyler S Alioto, Ivo Buchhalter, Sophia Derdak, Barbara Hutter, Matthew D Eldridge, Eivind Hovig, Lawrence E Heisler, Timothy A Beck, Jared T Simpson, Laurie Tonon, Anne-Sophie Sertier, Ann-Marie Patch, Natalie Jäger, Philip Ginsbach, Ruben M Drews, Nagarajan Paramasivam, Rolf Kabbe, Sasithorn Chotewutmontri, Nicolle Diessl, Christopher Previti, Sabine Schmidt, Benedikt Brors, Lars Feuerbach, Michael Heinold, Susanne Gröbner, Andrey Korshunov, Patrick S Tarpey, Adam P Butler, Jonathan Hinton, David Jones, Andrew Menzies, Keiran M Raine, Rebecca Shepherd, Lucy Stebbings, Jon W Teague, Paolo Ribeca, Francesc Castro Giner, Sergi Beltran, Emanuele Raineri, Marc Dabad, Simon Charles Heath, Marta Gut, Robert E Denroche, Nicholas J Harding, Takafumi N Yamaguchi, Akihiro Fujimoto, Hidewaki Nakagawa, Víctor Quesada, Rafael Valdés-Mas, Sigve Nakken, Daniel Vodák, Lawrence Bower, Andrew G Lynch, Charlotte L Anderson, Nicola Waddell, John V Pearson, Sean M Grimmond, Myron Peto, Paul Spellman, Minghui He, Cyriac Kandoth, Semin Lee, John Zhang, Louis Létourneau, Singer Ma, Sahil B Seth, David Torrents, Liu Xi, David A Wheeler, Carlos López-Otín, Elías Campo, Peter J Campbell, Paul C Boutros, Xose S Puente, Daniela S Gerhard, Stefan M Pfister, John D McPherson, Thomas J Hudson, Matthias Schlesner, Peter Lichter, Roland Eils, David T W Jones, Ivo Glynne Gut
A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing. Nature communications 6 (2015)

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Publication Activity (10 Years)

Top Topics

Top Venues

Tyler S Alioto (Tyler Alioto)