Wanding Zhou

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 39

Top Venues

Nucleic acids research

Nature communications

Briefings in bioinformatics

bioRxiv : the preprint server for biology

Children's Hospital of Philadelphia

Rice University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Children's Hospital of Philadelphia Nov 01 2019

United States

Assistant Professor :: Center for Computational and Genomic Medicine

Van Andel Research Institute - Oct 01 2019

United States

Postdoc :: Center for Epigenetics

The University of Texas MD Anderson Cancer Center

United States

Postdoc :: Bioinformatics and Computational Biology

Education History

Rice University

United States

PHD :: Bioengineering

Publications

Mian Umair Ahsan, Anagha Gouru, Joe Chan, Wanding Zhou, Kai Wang
A signal processing and deep learning framework for methylation detection using Oxford Nanopore sequencing. Nature communications 15 (1) (2024)
Sol Moe Lee, Christian E Loo, Rexxi D Prasasya, Marisa S Bartolomei, Rahul M Kohli, Wanding Zhou
Low-input and single-cell methods for Infinium DNA methylation BeadChips. Nucleic acids research 52 (7) (2024)
Sol Moe Lee, Christian E Loo, Rexxi D Prasasya, Marisa S Bartolomei, Rahul M Kohli, Wanding Zhou
Low-input and single-cell methods for Infinium DNA methylation BeadChips. Nucleic acids research (2024)
Wanding Zhou, Benjamin K Johnson, Jacob Morrison, Ian Beddows, James Eapen, Efrat Katsman, Ayush Semwal, Walid Abi Habib, Lyong Heo, Peter W Laird, Benjamin P Berman, Timothy J Triche, Hui Shen
BISCUIT: an efficient, standards-compliant tool suite for simultaneous genetic and epigenetic inference in bulk and single-cell studies. Nucleic acids research (2024)
Mahdi Moqri, Andrea Cipriano, Daniel J Simpson, Sajede Rasouli, Tara Murty, Tineke Anna de Jong, Daniel C Nachun, Guilherme de Sena Brandine, Albert K Ying, Andrei E Tarkhov, Karolina A Aberg, Edwin J C G van den Oord, Wanding Zhou, Andrew Smith, Crystal L Mackall, Vadim N Gladyshev, Steve Horvath, Michael Paul Snyder, Vittorio Sebastiano
PRC2-AgeIndex as a universal biomarker of aging and rejuvenation. Nature communications 15 (1) (2024)
Mahdi Moqri, Andrea Cipriano, Daniel J Simpson, Sajede Rasouli, Tara Murty, Tineke Anna de Jong, Daniel C Nachun, Guilherme de Sena Brandine, Albert K Ying, Andrei E Tarkhov, Karolina A Aberg, Edwin J C G van den Oord, Wanding Zhou, Andrew Smith, Crystal L Mackall, Vadim N Gladyshev, Steve Horvath, Michael Paul Snyder, Vittorio Sebastiano
PRC2-AgeIndex as a universal biomarker of aging and rejuvenation. Nature communications 15 (1) (2024)
Wanding Zhou, Benjamin K Johnson, Jacob Morrison, Ian Beddows, James Eapen, Efrat Katsman, Ayush Semwal, Walid Abi Habib, Lyong Heo, Peter W Laird, Benjamin P Berman, Timothy J Triche, Hui Shen
BISCUIT: an efficient, standards-compliant tool suite for simultaneous genetic and epigenetic inference in bulk and single-cell studies. Nucleic acids research 52 (6) (2024)
Sol Moe Lee, Christian E Loo, Rexxi D Prasasya, Marisa S Bartolomei, Rahul M Kohli, Wanding Zhou
Low-input and single-cell methods for Infinium DNA methylation BeadChips. Nucleic acids research (2024)
Rochelle L Tiedemann, Joel Hrit, Qian Du, Ashley K Wiseman, Hope E Eden, Bradley M Dickson, Xiangqian Kong, Alison A Chomiak, Robert M Vaughan, Jakob M Hebert, Yael David, Wanding Zhou, Stephen B Baylin, Peter A Jones, Susan J Clark, Scott B Rothbart
UHRF1 ubiquitin ligase activity supports the maintenance of low-density CpG methylation. bioRxiv : the preprint server for biology (2024)
Sol Moe Lee, Christian E Loo, Rexxi D Prasasya, Marisa S Bartolomei, Rahul M Kohli, Wanding Zhou
Low-input and single-cell methods for Infinium DNA methylation BeadChips. Nucleic acids research 52 (7) (2024)
Mian Umair Ahsan, Anagha Gouru, Joe Chan, Wanding Zhou, Kai Wang
A signal processing and deep learning framework for methylation detection using Oxford Nanopore sequencing. Nature communications 15 (1) (2024)
Mian Umair Ahsan, Anagha Gouru, Joe Chan, Wanding Zhou, Kai Wang
A signal processing and deep learning framework for methylation detection using Oxford Nanopore sequencing. Nature communications 15 (1) (2024)
Mian Umair Ahsan, Anagha Gouru, Joe Chan, Wanding Zhou, Kai Wang
A signal processing and deep learning framework for methylation detection using Oxford Nanopore sequencing. Nature communications 15 (1) (2024)
Sol Moe Lee, Christian E Loo, Rexxi D Prasasya, Marisa S Bartolomei, Rahul M Kohli, Wanding Zhou
Low-input and single-cell methods for Infinium DNA methylation BeadChips. Nucleic acids research 52 (7) (2024)
Sol Moe Lee, Christian E Loo, Rexxi D Prasasya, Marisa S Bartolomei, Rahul M Kohli, Wanding Zhou
Low-input and single-cell methods for Infinium DNA methylation BeadChips. Nucleic acids research 52 (7) (2024)
Mahdi Moqri, Andrea Cipriano, Daniel J Simpson, Sajede Rasouli, Tara Murty, Tineke Anna de Jong, Daniel C Nachun, Guilherme de Sena Brandine, Albert K Ying, Andrei E Tarkhov, Karolina A Aberg, Edwin J C G van den Oord, Wanding Zhou, Andrew Smith, Crystal L Mackall, Vadim N Gladyshev, Steve Horvath, Michael Paul Snyder, Vittorio Sebastiano
PRC2-AgeIndex as a universal biomarker of aging and rejuvenation. Nature communications 15 (1) (2024)
Mian Umair Ahsan, Anagha Gouru, Joe Chan, Wanding Zhou, Kai Wang
A signal processing and deep learning framework for methylation detection using Oxford Nanopore sequencing. Nature communications 15 (1) (2024)
Mahdi Moqri, Andrea Cipriano, Daniel J Simpson, Sajede Rasouli, Tara Murty, Tineke Anna de Jong, Daniel C Nachun, Guilherme de Sena Brandine, Albert K Ying, Andrei E Tarkhov, Karolina A Aberg, Edwin J C G van den Oord, Wanding Zhou, Andrew Smith, Crystal L Mackall, Vadim N Gladyshev, Steve Horvath, Michael Paul Snyder, Vittorio Sebastiano
PRC2-AgeIndex as a universal biomarker of aging and rejuvenation. Nature communications 15 (1) (2024)
Sol Moe Lee, Christian E Loo, Rexxi D Prasasya, Marisa S Bartolomei, Rahul M Kohli, Wanding Zhou
Low-input and single-cell methods for Infinium DNA methylation BeadChips. Nucleic acids research 52 (7) (2024)
Rochelle L Tiedemann, Joel Hrit, Qian Du, Ashley K Wiseman, Hope E Eden, Bradley M Dickson, Xiangqian Kong, Alison A Chomiak, Robert M Vaughan, Jakob M Hebert, Yael David, Wanding Zhou, Stephen B Baylin, Peter A Jones, Susan J Clark, Scott B Rothbart
UHRF1 ubiquitin ligase activity supports the maintenance of low-density CpG methylation. bioRxiv : the preprint server for biology (2024)
Wanding Zhou, Benjamin K Johnson, Jacob Morrison, Ian Beddows, James Eapen, Efrat Katsman, Ayush Semwal, Walid Abi Habib, Lyong Heo, Peter W Laird, Benjamin P Berman, Timothy J Triche, Hui Shen
BISCUIT: an efficient, standards-compliant tool suite for simultaneous genetic and epigenetic inference in bulk and single-cell studies. Nucleic acids research (2024)
Sol Moe Lee, Christian E Loo, Rexxi D Prasasya, Marisa S Bartolomei, Rahul M Kohli, Wanding Zhou
Low-input and single-cell methods for Infinium DNA methylation BeadChips. Nucleic acids research (2024)
Brian H Chen, Wanding Zhou
mLiftOver: harmonizing data across Infinium DNA methylation platforms. Bioinformatics (Oxford, England) 40 (7) (2024)
Brian H Chen, Wanding Zhou
mLiftOver: harmonizing data across Infinium DNA methylation platforms. Bioinformatics (Oxford, England) 40 (7) (2024)
Mian Umair Ahsan, Anagha Gouru, Joe Chan, Wanding Zhou, Kai Wang
A signal processing and deep learning framework for methylation detection using Oxford Nanopore sequencing. Nature communications 15 (1) (2024)
Wanding Zhou, Benjamin K Johnson, Jacob Morrison, Ian Beddows, James Eapen, Efrat Katsman, Ayush Semwal, Walid Abi Habib, Lyong Heo, Peter W Laird, Benjamin P Berman, Timothy J Triche, Hui Shen
BISCUIT: an efficient, standards-compliant tool suite for simultaneous genetic and epigenetic inference in bulk and single-cell studies. Nucleic acids research 52 (6) (2024)
Sol Moe Lee, Christian E Loo, Rexxi D Prasasya, Marisa S Bartolomei, Rahul M Kohli, Wanding Zhou
Low-input and single-cell methods for Infinium DNA methylation BeadChips. Nucleic acids research 52 (7) (2024)
Mahdi Moqri, Andrea Cipriano, Daniel J Simpson, Sajede Rasouli, Tara Murty, Tineke Anna de Jong, Daniel C Nachun, Guilherme de Sena Brandine, Albert K Ying, Andrei E Tarkhov, Karolina A Aberg, Edwin J C G van den Oord, Wanding Zhou, Andrew Smith, Crystal L Mackall, Vadim N Gladyshev, Steve Horvath, Michael Paul Snyder, Vittorio Sebastiano
PRC2-AgeIndex as a universal biomarker of aging and rejuvenation. Nature communications 15 (1) (2024)
Wanding Zhou, Benjamin K Johnson, Jacob Morrison, Ian Beddows, James Eapen, Efrat Katsman, Ayush Semwal, Walid Abi Habib, Lyong Heo, Peter W Laird, Benjamin P Berman, Timothy J Triche, Hui Shen
BISCUIT: an efficient, standards-compliant tool suite for simultaneous genetic and epigenetic inference in bulk and single-cell studies. Nucleic acids research 52 (6) (2024)
Wubin Ding, Diljeet Kaur, Steve Horvath, Wanding Zhou
Comparative epigenome analysis using Infinium DNA methylation BeadChips. Briefings in bioinformatics (2023)
Wubin Ding, Diljeet Kaur, Steve Horvath, Wanding Zhou
Comparative epigenome analysis using Infinium DNA methylation BeadChips. Briefings in bioinformatics 24 (1) (2023)
Amin Haghani, Caesar Z Li, Todd R Robeck, Joshua Zhang, Ake T Lu, Julia Ablaeva, Victoria América Acosta-Rodríguez, Danielle M Adams, Abdulaziz N Alagaili, Javier Almunia, Ajoy Aloysius, Nabil M S Amor, Reza Ardehali, Adriana Arneson, Charles Scott Baker, Gareth T Banks, Katherine Belov, Nigel Charles Bennett, Peter Black, Daniel T Blumstein, Eleanor K Bors, Charles E Breeze, Robert T Brooke, Janine L Brown, Gerald G Carter, Alex Caulton, Julie M Cavin, Lisa Chakrabarti, Ioulia Chatzistamou, Andreas S Chavez, Hao Chen, Kaiyang Cheng, Priscila Chiavellini, Oi-Wa Choi, Shannon M Clarke, Joseph A Cook, Lisa N Cooper, Marie-Laurence Cossette, Joanna Day, Joseph DeYoung, Stacy Dirocco, Christopher Dold, Jonathan L Dunnum, Erin E Ehmke, Candice K Emmons, Stephan Emmrich, Ebru Erbay, Claire Erlacher-Reid, Chris G Faulkes, Zhe Fei, Steven H Ferguson, Carrie J Finno, Jennifer E Flower, Jean-Michel Gaillard, Eva Garde, Livia Gerber, Vadim N Gladyshev, Rodolfo G Goya, Matthew J Grant, Carla B Green, M Bradley Hanson, Daniel William Hart, Martin Haulena, Kelsey Herrick, Andrew N Hogan, Carolyn J Hogg, Timothy Alexander Hore, Taosheng Huang, Juan Carlos Izpisua Belmonte, Anna J Jasinska, Gareth Jones, Eve Jourdain, Olga Kashpur, Harold Katcher, Etsuko Katsumata, Vimala Kaza, Hippokratis Kiaris, Michael S Kobor, Paweł Kordowitzki, William R Koski, Michael Krützen, Soo Bin Kwon, Brenda Larison, Sang-Goo Lee, Marianne Lehmann, Jean-François Lemaitre, Andrew J Levine, Xinmin Li, Cun Li, Andrea R Lim, David Tse Shen Lin, Dana M Lindemann, Schuyler W Liphardt, Thomas J Little, Nicholas Macoretta, Dewey Maddox, Craig O Matkin, Julie A Mattison, Matthew McClure, June Mergl, Jennifer J Meudt, Gisele A Montano, Khyobeni Mozhui, Jason Munshi-South, William J Murphy, Asieh Naderi, Martina Nagy, Pritika Narayan, Peter W Nathanielsz, Ngoc B Nguyen, Christof Niehrs, Batsaikhan Nyamsuren, Justine K O'Brien, Perrie O'Tierney Ginn, Duncan T Odom, Alexander G Ophir, Steve Osborn, Elaine A Ostrander, Kim M Parsons, Kimberly C Paul, Amy B Pedersen, Matteo Pellegrini, Katharina J Peters, Jessica L Petersen, Darren W Pietersen, Gabriela M Pinho, Jocelyn Plassais, Jesse R Poganik, Natalia A Prado, Pradeep Reddy, Benjamin Rey, Beate R Ritz, Jooke Robbins, Magdalena Rodriguez, Jennifer Russell, Elena Rydkina, Lindsay L Sailer, Adam B Salmon, Akshay Sanghavi, Kyle M Schachtschneider, Dennis Schmitt, Todd L Schmitt, Lars Schomacher, Lawrence B Schook, Karen E Sears, Ashley W Seifert, Aaron B A Shafer, Anastasia V Shindyapina, Melanie Simmons, Kavita Singh, Ishani Sinha, Jesse Slone, Russell Grant Snell, Elham Soltanmohammadi, Matthew L Spangler, Maria Spriggs, Lydia Staggs, Nancy Stedman, Karen J Steinman, Donald T Stewart, Victoria J Sugrue, Balazs Szladovits, Joseph S Takahashi, Masaki Takasugi, Emma C Teeling, Michael J Thompson, Bill Van Bonn, Sonja C Vernes, Diego Villar, Harry V Vinters, Ha Vu, Mary C Wallingford, Nan Wang, Gerald S Wilkinson, Robert W Williams, Qi Yan, Mingjia Yao, Brent G Young, Bohan Zhang, Zhihui Zhang, Yang Zhao, Peng Zhao, Wanding Zhou, Joseph Alan Zoller, Jason Ernst, Andrei Seluanov, Vera Gorbunova, Xiangdong William Yang, Kenneth Raj, Steve Horvath
DNA methylation networks underlying mammalian traits. Science (New York, N.Y.) 381 (6658) (2023)
Wubin Ding, Diljeet Kaur, Steve Horvath, Wanding Zhou
Comparative epigenome analysis using Infinium DNA methylation BeadChips. Briefings in bioinformatics 24 (1) (2023)
Wubin Ding, Diljeet Kaur, Steve Horvath, Wanding Zhou
Comparative epigenome analysis using Infinium DNA methylation BeadChips. Briefings in bioinformatics 24 (1) (2023)
Sol Moe Lee, Christian E Loo, Rexxi D Prasasya, Marisa S Bartolomei, Rahul M Kohli, Wanding Zhou
Low-input and single-cell methods for Infinium DNA methylation BeadChips. bioRxiv : the preprint server for biology (2023)
Tie-Bo Zeng, Nicholas Pierce, Ji Liao, Purnima Singh, Kin H Lau, Wanding Zhou, Piroska E Szab Formula See Text
EHMT2 suppresses the variation of transcriptional switches in the mouse embryo. PLoS genetics 17 (11) (2021)
Hitoshi Ohtani, Andreas Due Ørskov, Alexandra S Helbo, Linn Gillberg, Minmin Liu, Wanding Zhou, Johanna Ungerstedt, Eva Hellström-Lindberg, Weili Sun, Gangning Liang, Peter A Jones, Kirsten Grønbaek
Activation of a Subset of Evolutionarily Young Transposable Elements and Innate Immunity Are Linked to Clinical Responses to 5-Azacytidine. Cancer research 80 (12) (2020)
Wanding Zhou, Gangning Liang, Peter L Molloy, Peter A Jones
DNA methylation enables transposable element-driven genome expansion. Proceedings of the National Academy of Sciences of the United States of America 117 (32) (2020)
Wanding Zhou, Huy Q Dinh, Zachary Ramjan, Daniel J Weisenberger, Charles M Nicolet, Hui Shen, Peter W Laird, Benjamin P Berman
DNA methylation loss in late-replicating domains is linked to mitotic cell division. Nature genetics 50 (4) (2018)

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Publication Activity (10 Years)

Top Topics

Top Venues

Wanding Zhou