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Xavier Darzacq

ORCID

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 30

Top Venues

eLife

Genes & development

bioRxiv : the preprint server for biology

Biochemical Society transactions

University of California, Berkeley

Université Paul Sabatier (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of California, Berkeley Jul 1o 2018

United States

Associate professor :: Molecular and Cell Biology

Education History

Université Paul Sabatier Sep 1o 1999 - May 13o 2002

France

PHD :: Biology

Publications

Anna C Maurer, Brian Benyamini, Vinson B Fan, Oscar N Whitney, Gina M Dailey, Xavier Darzacq, Matthew D Weitzman, Robert Tse Nan Tjian
Double-Strand Break Repair Pathways Differentially Affect Processing and Transduction by Dual AAV Vectors. bioRxiv : the preprint server for biology (2023)
Liza Dahal, Thomas G W Graham, Gina M Dailey, Alec Basil Heckert, Robert Tse Nan Tjian, Xavier Darzacq
Surprising Features of Nuclear Receptor Interaction Networks Revealed by Live Cell Single Molecule Imaging. bioRxiv : the preprint server for biology (2023)
John J Ferrie, Jonathan P Karr, Thomas G W Graham, Gina M Dailey, Gloria Zhang, Robert Tse Nan Tjian, Xavier Darzacq
p300 Is an Obligate Integrator of Combinatorial Transcription Factor Inputs. bioRxiv : the preprint server for biology (2023)
Jian Zhou, Claudia Cattoglio, Yingyao Shao, Harini P Tirumala, Carlo Vetralla, Sameer S Bajikar, Yan Li, Hu Chen, Qi Wang, Zhenyu Wu, Bing Tang, Mahla Zahabiyon, Aleksandar Bajic, Xiangling Meng, Jack J Ferrie, Anel LaGrone, Ping Zhang, Jean J Kim, Jianrong Tang, Zhandong Liu, Xavier Darzacq, Nathaniel Heintz, Robert Tse Nan Tjian, Huda Yaya Zoghbi
A novel pathogenic mutation of MeCP2 impairs chromatin association independent of protein levels. Genes & development (2023)
Samuel Collombet, Isabell Rall, Claire Dugast-Darzacq, Alec Heckert, Aliaksandr Halavatyi, Agnes Le Saux, Gina M Dailey, Xavier Darzacq, Edith Heard
RNA polymerase II depletion from the inactive X chromosome territory is not mediated by physical compartmentalization. Nature structural & molecular biology (2023)
Liza Dahal, Nike Walther, Robert Tjian, Xavier Darzacq, Thomas G W Graham
Single-molecule tracking (SMT): a window into live-cell transcription biochemistry. Biochemical Society transactions (2023)
Yu Chen, Claudia Cattoglio, Gina M Dailey, Qiulin Zhu, Robert Tse Nan Tjian, Xavier Darzacq
Mechanisms governing target search and binding dynamics of hypoxia-inducible factors. eLife 11 (2022)
Alec Basil Heckert, Liza Dahal, Robert Tijan, Xavier Darzacq
Recovering mixtures of fast-diffusing states from short single-particle trajectories. eLife 11 (2022)
Tsung-Han S Hsieh, Claudia Cattoglio, Elena Slobodyanyuk, Anders S Hansen, Xavier Darzacq, Robert Tse Nan Tjian
Enhancer-promoter interactions and transcription are largely maintained upon acute loss of CTCF, cohesin, WAPL or YY1. Nature genetics 54 (12) (2022)
Thomas G W Graham, John Joseph Ferrie, Gina M Dailey, Robert Tse Nan Tjian, Xavier Darzacq
Detecting molecular interactions in live-cell single-molecule imaging with proximity-assisted photoactivation (PAPA). eLife 11 (2022)
Anna Sawicka, Gabriel Villamil, Michael Lidschreiber, Xavier Darzacq, Claire Dugast-Darzacq, Björn Schwalb, Patrick Cramer
Transcription activation depends on the length of the RNA polymerase II C-terminal domain. The EMBO journal 40 (9) (2021)
Dominik A Herbst, Meagan N Esbin, Robert K Louder, Claire Dugast-Darzacq, Gina M Dailey, Qianglin Fang, Xavier Darzacq, Robert Tse Nan Tjian, Eva Nogales
Structure of the human SAGA coactivator complex. Nature structural & molecular biology 28 (12) (2021)
Jonathan P Karr, John J Ferrie, Robert Tse Nan Tjian, Xavier Darzacq
The transcription factor activity gradient (TAG) model: contemplating a contact-independent mechanism for enhancer-promoter communication. Genes & development 36 (1-2) (2021)
Xavier Darzacq, Robert Tse Nan Tjian
Weak Multivalent Biomolecular Interactions: A Strength vs Numbers Tug of War with Implications for Phase Partitioning. RNA (New York, N.Y.) (2021)
Lorenzo Costantino, Tsung-Han S Hsieh, Rebecca Lamothe, Xavier Darzacq, Douglas E Koshland
Cohesin residency determines chromatin loop patterns. eLife 9 (2020)
Matthew W Parker, Maren Bell, Mustafa Mir, Jonchee A Kao, Xavier Darzacq, Michael R Botchan, James M Berger
A new class of disordered elements controls DNA replication through initiator self-assembly. eLife 8 (2019)
Marlies E Oomen, Anders S Hansen, Yu Liu, Xavier Darzacq, Job Dekker
CTCF sites display cell cycle-dependent dynamics in factor binding and nucleosome positioning. Genome research 29 (2) (2019)
David Trombley McSwiggen, Anders S Hansen, Sheila S Teves, Hervé Marie-Nelly, Yvonne Hao, Alec Basil Heckert, Kayla K Umemoto, Claire Dugast-Darzacq, Robert Tse Nan Tjian, Xavier Darzacq
Evidence for DNA-mediated nuclear compartmentalization distinct from phase separation. eLife 8 (2019)
Claudia Cattoglio, Iryna Pustova, Nike Walther, Jaclyn J Ho, Merle Hantsche-Grininger, Carla J Inouye, M Julius Hossain, Gina M Dailey, Jan Ellenberg, Xavier Darzacq, Robert Tse Nan Tjian, Anders S Hansen
Determining cellular CTCF and cohesin abundances to constrain 3D genome models. eLife 8 (2019)
Anders S Hansen, Assaf Amitai, Claudia Cattoglio, Robert Tse Nan Tjian, Xavier Darzacq
Guided nuclear exploration increases CTCF target search efficiency. Nature chemical biology 16 (3) (2019)
Shasha Chong, Claire Dugast-Darzacq, Zhe Liu, Peng Dong, Gina M Dailey, Claudia Cattoglio, Alec Basil Heckert, Sambashiva Banala, Luke D Lavis, Xavier Darzacq, Robert Tse Nan Tjian
Imaging dynamic and selective low-complexity domain interactions that control gene transcription. Science (New York, N.Y.) 361 (6400) (2018)
Anders S Hansen, Maxime Woringer, Jonathan B Grimm, Luke D Lavis, Robert Tse Nan Tjian, Xavier Darzacq
Robust model-based analysis of single-particle tracking experiments with Spot-On. eLife 7 (2018)
Sheila S Teves, Luye An, Aarohi Bhargava-Shah, Liangqi Xie, Xavier Darzacq, Robert Tse Nan Tjian
A stable mode of bookmarking by TBP recruits RNA polymerase II to mitotic chromosomes. eLife 7 (2018)
Maxime Woringer, Xavier Darzacq
Protein motion in the nucleus: from anomalous diffusion to weak interactions. Biochemical Society transactions 46 (4) (2018)
Mustafa Mir, Michael R Stadler, Stephan A Ortiz, Colleen E Hannon, Melissa M Harrison, Xavier Darzacq, Michael B Eisen
Dynamic multifactor hubs interact transiently with sites of active transcription in Drosophila embryos. eLife 7 (2018)
Anders S Hansen, Claudia Cattoglio, Xavier Darzacq, Robert Tse Nan Tjian
Recent evidence that TADs and chromatin loops are dynamic structures. Nucleus (Austin, Tex.) 9 (1) (2017)
Anders S Hansen, Iryna Pustova, Claudia Cattoglio, Robert Tse Nan Tjian, Xavier Darzacq
CTCF and cohesin regulate chromatin loop stability with distinct dynamics. eLife 6 (2017)
Yidi Sun, Nicole T Leong, Tommy Jiang, Astou Tangara, Xavier Darzacq, David G Drubin
Switch-like Arp2/3 activation upon WASP and WIP recruitment to an apparent threshold level by multivalent linker proteins in vivo. eLife 6 (2017)
Kunitoshi Chiba, Franziska K Lorbeer, A Hunter Shain, David Trombley McSwiggen, Eva Schruf, Areum Oh, Jekwan Ryu, Xavier Darzacq, Boris C Bastian, Dirk Hockemeyer
Mutations in the promoter of the telomerase gene TERT contribute to tumorigenesis by a two-step mechanism. Science (New York, N.Y.) 357 (6358) (2017)
Mustafa Mir, Armando Reimer, Jenna E Haines, Xiao-Yong Li, Michael Stadler, Hernan Garcia, Michael B Eisen, Xavier Darzacq
Dense Bicoid hubs accentuate binding along the morphogen gradient. Genes & development 31 (17) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Xavier Darzacq