Xiang-Dong Fu (Xiangdong Fu)

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 39

Top Venues

Nature communications

Blood advances

Nature structural & molecular biology

Cell research

University of California San Diego

Case Western Reserve University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of California San Diego Apr 01 1992

United States

Professor :: Cellular and Molecular Medicine

Education History

Case Western Reserve University Sep 01 1983 - Jun 30 1988

United States

PHD :: Biochemistry

Publications

Xuan Zhang, Jun Xu, Jing Hu, Sitao Zhang, Yajing Hao, Dongyang Zhang, Hao Qian, Dong Wang, Xiang-Dong Fu
Cockayne Syndrome Linked to Elevated R-Loops Induced by Stalled RNA Polymerase II during Transcription Elongation. Nature communications 15 (1) (2024)
Xuan Zhang, Jun Xu, Jing Hu, Sitao Zhang, Yajing Hao, Dongyang Zhang, Hao Qian, Dong Wang, Xiang-Dong Fu
Cockayne Syndrome Linked to Elevated R-Loops Induced by Stalled RNA Polymerase II during Transcription Elongation. Nature communications 15 (1) (2024)
Nathan Daniel Jayne, Zhengyu Liang, Do-Hwan Lim, Poshen Benson Chen, Cristina Diaz, Kei-Ichiro Arimoto, Lingbo Xia, Mengdan Liu, Bing Ren, Xiang-Dong Fu, Dong-Er Zhang
RUNX1 C-terminal mutations impair blood cell differentiation by perturbing specific enhancer-promoter networks. Blood advances 8 (10) (2024)
Nathan Daniel Jayne, Zhengyu Liang, Do-Hwan Lim, Poshen Benson Chen, Cristina Diaz, Kei-Ichiro Arimoto, Lingbo Xia, Mengdan Liu, Bing Ren, Xiang-Dong Fu, Dong-Er Zhang
RUNX1 C-terminal mutations impair blood cell differentiation by perturbing specific enhancer-promoter networks. Blood advances 8 (10) (2024)
Xuan Zhang, Jun Xu, Jing Hu, Sitao Zhang, Yajing Hao, Dongyang Zhang, Hao Qian, Dong Wang, Xiang-Dong Fu
Cockayne Syndrome Linked to Elevated R-Loops Induced by Stalled RNA Polymerase II during Transcription Elongation. Nature communications 15 (1) (2024)
Xuan Zhang, Jun Xu, Jing Hu, Sitao Zhang, Yajing Hao, Dongyang Zhang, Hao Qian, Dong Wang, Xiang-Dong Fu
Cockayne Syndrome Linked to Elevated R-Loops Induced by Stalled RNA Polymerase II during Transcription Elongation. Nature communications 15 (1) (2024)
Nathan Daniel Jayne, Zhengyu Liang, Do-Hwan Lim, Poshen Benson Chen, Cristina Diaz, Kei-Ichiro Arimoto, Lingbo Xia, Mengdan Liu, Bing Ren, Xiang-Dong Fu, Dong-Er Zhang
RUNX1 C-terminal mutations impair blood cell differentiation by perturbing specific enhancer-promoter networks. Blood advances 8 (10) (2024)
Nathan Daniel Jayne, Zhengyu Liang, Do-Hwan Lim, Poshen Benson Chen, Cristina Diaz, Kei-Ichiro Arimoto, Lingbo Xia, Mengdan Liu, Bing Ren, Xiang-Dong Fu, Dong-Er Zhang
RUNX1 C-terminal mutations impair blood cell differentiation by perturbing specific enhancer-promoter networks. Blood advances 8 (10) (2024)
Xiang-Dong Fu
RNA editing: new roles in feedback and feedforward control. Cell research (2023)
Zhengyu Liang, Collin Gilbreath, Wenyue Liu, Yan Wang, Michael Q Zhang, Dong-Er Zhang, Sihan Wu, Xiang-Dong Fu
Chromatin-associated RNA Dictates the ecDNA Interactome in the Nucleus. bioRxiv : the preprint server for biology (2023)
Yajing Hao, Ting Cai, Chang Liu, Xuan Zhang, Xiang-Dong Fu
Sequential Polyadenylation to Enable Alternative mRNA 3' End Formation. Molecules and cells 46 (1) (2023)
Yajing Hao, Jing Hu, Yuanchao Xue, Steven F Dowdy, William C Mobley, Hao Qian, Xiang-Dong Fu
Reply to: Ptbp1 deletion does not induce astrocyte-to-neuron conversion. Nature 618 (7964) (2023)
Yajing Hao, Ting Cai, Chang Liu, Xuan Zhang, Xiang-Dong Fu
Sequential Polyadenylation to Enable Alternative mRNA 3' End Formation. Molecules and cells 46 (1) (2023)
Yajing Hao, Ting Cai, Chang Liu, Xuan Zhang, Xiang-Dong Fu
Sequential Polyadenylation to Enable Alternative mRNA 3' End Formation. Molecules and cells 46 (1) (2023)
Yajing Hao, Shuyang Zhang, Changwei Shao, Junhui Li, Guofeng Zhao, Dong-Er Zhang, Xiang-Dong Fu
ZetaSuite: computational analysis of two-dimensional high-throughput data from multi-target screens and single-cell transcriptomics. Genome biology 23 (1) (2022)
Peng Tang, Yang Yang, Guangnan Li, Li Huang, Miaomiao Wen, Wen Ruan, Xiaolong Guo, Chen Zhang, Xinxin Zuo, Daji Luo, Yong-Zhen Xu, Xiang-Dong Fu, Yu Zhou
Alternative polyadenylation by sequential activation of distal and proximal PolyA sites. Nature structural & molecular biology 29 (1) (2022)
Shenghong Ma, Tracy Tang, Gary Probst, Andrei Konradi, Chunyu Jin, Fulong Li, J Silvio Gutkind, Xiang-Dong Fu, Kun-Liang Guan
Transcriptional repression of estrogen receptor alpha by YAP reveals the Hippo pathway as therapeutic target for ER + breast cancer. Nature communications 13 (1) (2022)
Jad N Kanbar, Shengyun Ma, Eleanor S Kim, Nadia S Kurd, Matthew S Tsai, Tiffani Tysl, Christella E Widjaja, Abigail E Limary, Brian A Yee, Zhaoren He, Yajing Hao, Xiang-Dong Fu, Gene W Yeo, Wendy Jia Men Huang, John T Chang
The long noncoding RNA Malat1 regulates CD8+ T cell differentiation by mediating epigenetic repression. The Journal of experimental medicine 219 (6) (2022)
Baolei Yuan, Xuan Zhou, Keiichiro Suzuki, Gerardo Ramos-Mandujano, Mengge Wang, Muhammad Tehseen, Lorena V Cortés-Medina, James J Moresco, Sarah Dunn, Reyna Hernandez-Benitez, Tomoaki Hishida, Na Young Kim, Manal M Andijani, Chongwei Bi, Manching Ku, Yuta Takahashi, Jinna Xu, Jinsong Qiu, Ling Huang, Christopher W Benner, Emi Aizawa, Jing Qu, Guang-Hui Liu, Zhongwei Li, Fei Yi, Yanal Ghosheh, Changwei Shao, Maxim Shokhirev, Patrizia Comoli, Francesco Frassoni, John Yates Iii, Xiang-Dong Fu, Concepcion Rodriguez Esteban, Samir M Hamdan, Juan Carlos Izpisua Belmonte, Mo Li
Author Correction: Wiskott-Aldrich syndrome protein forms nuclear condensates and regulates alternative splicing. Nature communications 13 (1) (2022)
Baolei Yuan, Xuan Zhou, Keiichiro Suzuki, Gerardo Ramos-Mandujano, Mengge Wang, Muhammad Tehseen, Lorena V Cortés-Medina, James J Moresco, Sarah Dunn, Reyna Hernandez-Benitez, Tomoaki Hishida, Na Young Kim, Manal M Andijani, Chongwei Bi, Manching Ku, Yuta Takahashi, Jinna Xu, Jinsong Qiu, Ling Huang, Christopher W Benner, Emi Aizawa, Jing Qu, Guang-Hui Liu, Zhongwei Li, Fei Yi, Yanal Ghosheh, Changwei Shao, Maxim Shokhirev, Patrizia Comoli, Francesco Frassoni, John Yates Iii, Xiang-Dong Fu, Concepcion Rodriguez Esteban, Samir M Hamdan, Juan Carlos Izpisua Belmonte, Mo Li
Wiskott-Aldrich syndrome protein forms nuclear condensates and regulates alternative splicing. Nature communications 13 (1) (2022)
Yi-Jou Huang, Jia-Yu Chen, Ming Yan, Amanda G Davis, Sayuri Miyauchi, Liang Chen, Yajing Hao, Sigrid Katz, Rafael Bejar, Omar Abdel-Wahab, Xiang-Dong Fu, Dong-Er Zhang
RUNX1 deficiency cooperates with SRSF2 mutation to induce multilineage hematopoietic defects characteristic of MDS. Blood advances (2022)
Zhengyu Liang, Xiang-Dong Fu
3D genome encoded by LINE and SINE repeats. Cell research 31 (6) (2021)
Tongbin Wu, Zhengyu Liang, Zengming Zhang, Canzhao Liu, Lunfeng Zhang, Yusu Gu, Kirk L Peterson, Sylvia M Evans, Xiang-Dong Fu, Ju Chen
PRDM16 Is a Compact Myocardium-Enriched Transcription Factor Required to Maintain Compact Myocardial Cardiomyocyte Identity in Left Ventricle. Circulation 145 (8) (2021)
Xinxin Zuo, Jie Zhou, Yinming Li, Kai Wu, Zonggui Chen, Zhiwei Luo, Xiaorong Zhang, Yi Yang, Miguel Angel Esteban, Yu Zhou, Xiang-Dong Fu
TDP-43 aggregation induced by oxidative stress causes global mitochondrial imbalance in ALS. Nature structural & molecular biology 28 (2) (2021)
Lanxia Li, Haofei Luo, Do-Hwan Lim, Lu Han, Yan Li, Xiang-Dong Fu, Yijun Qi
Global profiling of RNA-chromatin interactions reveals co-regulatory gene expression networks in Arabidopsis. Nature plants 7 (10) (2021)
Jun-Bao Fan, Sayuri Miyauchi, Hui-Zhong Xu, Dan Liu, Leo J Y Kim, Christoph Burkart, Hua Cheng, Kei-Ichiro Arimoto, Ming Yan, Yu Zhou, Balázs Győrffy, Klaus-Peter Knobeloch, Jeremy N Rich, Hu Cang, Xiang-Dong Fu, Dong-Er Zhang
Type I Interferon Regulates a Coordinated Gene Network to Enhance Cytotoxic T Cell-Mediated Tumor Killing. Cancer discovery 10 (3) (2020)
Cheng Wang, Zhihong Zhou, Charannya Sozheesvari Subhramanyam, Qiong Cao, Zealyn Shi-Lin Heng, Wen Liu, Xiang-Dong Fu, Qidong Hu
SRPK1 acetylation modulates alternative splicing to regulate cisplatin resistance in breast cancer cells. Communications biology 3 (1) (2020)
Eric L Van Nostrand, Peter Freese, Gabriel A Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M Blue, Jia-Yu Chen, Neal A L Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra Bazile, Louis Philip Benoit Bouvrette, Julie Bergalet, Michael O Duff, Keri E Garcia, Chelsea Gelboin-Burkhart, Myles Hochman, Nicole J Lambert, Hairi Li, Michael P McGurk, Thai B Nguyen, Tsultrim Palden, Ines Rabano, Shashank Sathe, Rebecca Stanton, Amanda Su, Ruth Wang, Brian A Yee, Bing Zhou, Ashley L Louie, Stefan Aigner, Xiang-Dong Fu, Eric Lécuyer, Christopher B Burge, Brenton R Graveley, Gene W Yeo
A large-scale binding and functional map of human RNA-binding proteins. Nature 583 (7818) (2020)
Xiang-Dong Fu
RNA helicases regulate RNA condensates. Cell research 30 (4) (2020)
Yajing Hao, Dongpeng Wang, Shuheng Wu, Xiao Li, Changwei Shao, Peng Zhang, Jia-Yu Chen, Do-Hwan Lim, Xiang-Dong Fu, Runsheng Chen, Shunmin He
Active retrotransposons help maintain pericentromeric heterochromatin required for faithful cell division. Genome research 30 (11) (2020)
Hao Qian, Xinjiang Kang, Jing Hu, Dongyang Zhang, Zhengyu Liang, Fan Meng, Xuan Zhang, Yuanchao Xue, Roy Maimon, Steven F Dowdy, Neal K Devaraj, Zhuan Zhou, William C Mobley, Don W Cleveland, Xiang-Dong Fu
Reversing a model of Parkinson's disease with in situ converted nigral neurons. Nature 582 (7813) (2020)
Kuanxing Gao, Man Cheng, Xinxin Zuo, Jin-Zhong Lin, Kurt Hoogewijs, Michael P Murphy, Xiang-Dong Fu, Xiaorong Zhang
Active RNA interference in mitochondria. Cell research 31 (2) (2020)
Xiao Li, Xiang-Dong Fu
Chromatin-associated RNAs as facilitators of functional genomic interactions. Nature reviews. Genetics 20 (9) (2019)
Jia-Yu Chen, Xuan Zhang, Xiang-Dong Fu, Liang Chen
R-ChIP for genome-wide mapping of R-loops by using catalytically inactive RNASEH1. Nature protocols 14 (5) (2019)
Bing Zhou, Xiao Li, Daji Luo, Do-Hwan Lim, Yu Zhou, Xiang-Dong Fu
GRID-seq for comprehensive analysis of global RNA-chromatin interactions. Nature protocols 14 (7) (2019)
Kai Zhang, Xiaorong Zhang, Zhiqiang Cai, Jie Zhou, Ran Cao, Ya Zhao, Zonggui Chen, Dehe Wang, Wen Ruan, Qian Zhao, Guangqiao Liu, Yuanchao Xue, Yan Qin, Bing Zhou, Ligang Wu, Timothy Nilsen, Yu Zhou, Xiang-Dong Fu
A novel class of microRNA-recognition elements that function only within open reading frames. Nature structural & molecular biology 25 (11) (2018)
Xichen Bao, Xiangpeng Guo, Menghui Yin, Muqddas Tariq, Yiwei Lai, Shahzina Kanwal, Jiajian Zhou, Na Li, Yuan Lv, Carlos Pulido-Quetglas, Xiwei Wang, Lu Ji, Muhammad J Khan, Xihua Zhu, Zhiwei Luo, Changwei Shao, Do-Hwan Lim, Xiao Liu, Nan Li, Wei Wang, Minghui He, Yu-Lin Liu, Carl Ward, Tong Wang, Gong Zhang, Dongye Wang, Jian-Hua Yang, Yiwen Chen, Chaolin Zhang, Ralf Jauch, Yun-Gui Yang, Yangming Wang, Baoming Qin, Minna-Liisa Anko, Andrew P Hutchins, Hao Sun, Huating Wang, Xiang-Dong Fu, Biliang Zhang, Miguel Angel Esteban
Capturing the interactome of newly transcribed RNA. Nature methods 15 (3) (2018)
Li Jiang, Changwei Shao, Qi-Jia Wu, Geng Chen, Jie Zhou, Bo Yang, Hairi Li, Lan-Tao Gou, Yi Zhang, Yangming Wang, Gene W Yeo, Yu Zhou, Xiang-Dong Fu
NEAT1 scaffolds RNA-binding proteins and the Microprocessor to globally enhance pri-miRNA processing. Nature structural & molecular biology 24 (10) (2017)
Xiao Li, Bing Zhou, Liang Chen, Lan-Tao Gou, Hairi Li, Xiang-Dong Fu
GRID-seq reveals the global RNA-chromatin interactome. Nature biotechnology 35 (10) (2017)

Xiang-Dong Fu.css-eqlu8i{font-size:small;padding-left:4px;} (Xiangdong Fu)

Publication Activity (10 Years)

Top Topics

Top Venues

Xiang-Dong Fu (Xiangdong Fu)