Yinghao Wu

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 23

Top Topics

Protein Protein

Molecular Dynamics

Top Venues

Protein science : a publication of the Protein Society

bioRxiv : the preprint server for biology

PLoS computational biology

This page only lists publications with an associated author ORCID identifier.

Publications

Zhaoqian Su, Yinghao Wu
Dissecting the general mechanisms of protein cage self-assembly by coarse-grained simulations. Protein science : a publication of the Protein Society 32 (2) (2023)
Zhaoqian Su, Yinghao Wu
Dissecting the general mechanisms of protein cage self-assembly by coarse-grained simulations. Protein science : a publication of the Protein Society 32 (2) (2023)
Zhaoqian Su, Vinh H Vu, Deborah E Leckband, Yinghao Wu
A computational study for understanding the impact of p120-catenin on the cis-dimerization of cadherin. Journal of molecular cell biology (2023)
Zhixin Jing, Phillip Galbo, Luis Jose Ovando, Megan Demouth, Skylar Welte, Rosa Park, Kartik Chandran, Yinghao Wu, Thomas MacCarthy, Deyou Zheng, David R Fooksman
Fine-tuning spatial-temporal dynamics and surface receptor expression support plasma cell-intrinsic longevity. bioRxiv : the preprint server for biology (2023)
Zhaoqian Su, Yinghao Wu
Dissecting the general mechanisms of protein cage self-assembly by coarse-grained simulations. Protein science : a publication of the Protein Society 32 (2) (2023)
Zhaoqian Su, Steven C Almo, Yinghao Wu
Understanding the General Principles of T Cell Engagement by Multiscale Computational Simulations. bioRxiv : the preprint server for biology (2023)
Elisa B Frankel, Araven Tiroumalechetty, Parise S Henry, Zhaoqian Su, Yinghao Wu, Peri T Kurshan
Protein-lipid interactions drive presynaptic assembly upstream of cell adhesion molecules. bioRxiv : the preprint server for biology (2023)
Zhaoqian Su, Yinghao Wu
Dissecting the General Mechanisms of Protein Cage Self-assembly by Coarse-grained Simulations. Protein science : a publication of the Protein Society (2022)
Kalyani Dhusia, Carlos Madrid, Zhaoqian Su, Yinghao Wu
EXCESP: A Structure-Based Online Database for Extracellular Interactome of Cell Surface Proteins in Humans. Journal of proteome research 21 (2) (2022)
Yinghao Wu, Kalyani Dhusia, Zhaoqian Su
Mechanistic dissection of spatial organization in NF-κB signaling pathways by hybrid simulations. Integrative biology : quantitative biosciences from nano to macro 13 (5) (2022)
Zhaoqian Su, Yinghao Wu
Dissecting the General Mechanisms of Protein Cage Self-assembly by Coarse-grained Simulations. Protein science : a publication of the Protein Society (2022)
Zhaoqian Su, Yinghao Wu
How does the same ligand activate signaling of different receptors in TNFR superfamily: a computational study. Journal of cell communication and signaling (2022)
Zhaoqian Su, Kalyani Dhusia, Yinghao Wu
Understanding the functional role of membrane confinements in TNF-mediated signaling by multiscale simulations. Communications biology 5 (1) (2022)
Zhaoqian Su, Kalyani Dhusia, Yinghao Wu
Understanding the impacts of cellular environments on ligand binding of membrane receptors by computational simulations. The Journal of chemical physics 154 (5) (2021)
Zhaoqian Su, Kalyani Dhusia, Yinghao Wu
A computational study of co-inhibitory immune complex assembly at the interface between T cells and antigen presenting cells. PLoS computational biology 17 (3) (2021)
Bo Wang, Zhaoqian Su, Yinghao Wu
Characterizing the function of domain linkers in regulating the dynamics of multi-domain fusion proteins by microsecond molecular dynamics simulations and artificial intelligence. Proteins 89 (7) (2021)
Kalyani Dhusia, Yinghao Wu
Classification of protein-protein association rates based on biophysical informatics. BMC bioinformatics 22 (1) (2021)
Kalyani Dhusia, Zhaoqian Su, Yinghao Wu
Understanding the Impacts of Conformational Dynamics on the Regulation of Protein-Protein Association by a Multiscale Simulation Method. Journal of chemical theory and computation 16 (8) (2020)
Connor J Thompson, Zhaoqian Su, Vinh H Vu, Yinghao Wu, Deborah E Leckband, Daniel K Schwartz
Cadherin clusters stabilized by a combination of specific and nonspecific cis-interactions. eLife 9 (2020)
Zhaoqian Su, Yinghao Wu
Computational simulations of TNF receptor oligomerization on plasma membrane. Proteins 88 (5) (2019)
Bo Wang, Junjie Zhang, Yinghao Wu
A Multiscale Model for the Self-Assembly of Coat Proteins in Bacteriophage MS2. Journal of chemical information and modeling 59 (9) (2019)
Jiawen Chen, Bo Wang, Yinghao Wu
Structural Characterization and Function Prediction of Immunoglobulin-like Fold in Cell Adhesion and Cell Signaling. Journal of chemical information and modeling 58 (2) (2018)
Jiawen Chen, Steven C Almo, Yinghao Wu
General principles of binding between cell surface receptors and multi-specific ligands: A computational study. PLoS computational biology 13 (10) (2017)