Deyou Zheng

ORCID

Publication Activity (10 Years)

Years Active: 2014-2024
Publications (10 Years): 91

Top Venues

Nature communications

Nature cell biology

Science advances

bioRxiv : the preprint server for biology

Albert Einstein College of Medicine

Rutgers University New Brunswick (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Albert Einstein College of Medicine Sep 01 2007

United States

Assistant/Associate Professor/Professor :: Neurology, Genetics, Neuroscience

Yale University Oct 01 2003 - Aug 30 2007

United States

Postdoc :: Molecular Biophysics & Biochemistry

Rutgers University New Brunswick Sep 01 1998 - Sep 30 2003

United States

Graduate Student :: Biochemistray

Education History

Rutgers University New Brunswick Sep 01 1998 - Jul 01 2003

United States

PHD :: Computational Molecular Biology

China Agricultural University Sep 01 1988 - Jul 10 2002

China

BSC :: Microbiology

Auburn University Mar 01 1996 - Jun 01 1998

United States

MSC :: Pathobiology

Publications

Donghong Zhang, Yidong Wang, Pengfei Lu, Ping Wang, Xinchun Yuan, Jianyun Yan, Chenleng Cai, Ching-Pin Chang, Deyou Zheng, Bingruo Wu, Bin Zhou
Retraction Note: REST regulates the cell cycle for cardiac development and regeneration. Nature communications 15 (1) (2024)
Anne Van Arsdale, Lauren Turker, Yoke-Chen Chang, Joshua Gould, Bryan Harmon, Elaine C Maggi, Olga Meshcheryakova, Maxwell P Brown, Dana Luong, Koenraad Van Doorslaer, Mark H Einstein, Dennis Y S Kuo, Deyou Zheng, Brian J Haas, Jack Lenz, Cristina Montagna
Structure and transcription of integrated HPV DNA in vulvar carcinomas. NPJ genomic medicine 9 (1) (2024)
Christopher D Nishimura, Devin T Corrigan, Xiang Yu Zheng, Phillip M Galbo, Shan Wang, Yao Liu, Yao Wei, Linna Suo, Wei Cui, Nadia Mercado, Deyou Zheng, Cheng Cheng Zhang, Xingxing Zang
TOP CAR with TMIGD2 as a safe and effective costimulatory domain in CAR cells treating human solid tumors. Science advances 10 (19) (2024)
Minh Binh Nguyen, Pooja Flora, Meagan C Branch, Madison Weber, Xiang Yu Zheng, Unnikrishnan Sivan, Simon Joost, Karl Annusver, Deyou Zheng, Maria Kasper, Elena Ezhkova
Tenascin-C expressing touch dome keratinocytes exhibit characteristics of all epidermal lineages. Science advances 10 (3) (2024)
Donghong Zhang, Yidong Wang, Pengfei Lu, Ping Wang, Xinchun Yuan, Jianyun Yan, Chenleng Cai, Ching-Pin Chang, Deyou Zheng, Bingruo Wu, Bin Zhou
Retraction Note: REST regulates the cell cycle for cardiac development and regeneration. Nature communications 15 (1) (2024)
Zhixin Jing, Phillip M Galbo, Luis Jose Ovando, Megan Demouth, Skylar Welte, Rosa Park, Kartik Chandran, Yinghao Wu, Thomas MacCarthy, Deyou Zheng, David R Fooksman
Fine-tuning spatial-temporal dynamics and surface receptor expression support plasma cell-intrinsic longevity. eLife 12 (2024)
Kevin O'Leary, Deyou Zheng
Metacell-based differential expression analysis identifies cell type specific temporal gene response programs in COVID-19 patient PBMCs. NPJ systems biology and applications 10 (1) (2024)
Zhixin Jing, Phillip M Galbo, Luis Jose Ovando, Megan Demouth, Skylar Welte, Rosa Park, Kartik Chandran, Yinghao Wu, Thomas MacCarthy, Deyou Zheng, David R Fooksman
Fine-tuning spatial-temporal dynamics and surface receptor expression support plasma cell-intrinsic longevity. eLife 12 (2024)
Xueqian Zhuang, Qing Wang, Simon Joost, Alexander Ferrena, David T Humphreys, Zhuxuan Li, Melissa Blum, Klavdija Bastl, Selena Ding, Yuna Landais, Yingqian Zhan, Yang Zhao, Ronan Chaligne, Joo-Hyeon Lee, Sebastian E Carrasco, Umeshkumar K Bhanot, Richard P Koche, Matthew J Bott, Pekka Katajisto, Yadira M Soto-Feliciano, Thomas Pisanic, Tiffany Thomas, Deyou Zheng, Emily S Wong, Tuomas Tammela
Aging limits stemness and tumorigenesis in the lung by reprogramming iron homeostasis. bioRxiv : the preprint server for biology (2024)
Alexander Ferrena, Ranxin Zhang, Jichuan Wang, Xiang Yu Zheng, Barlas Göker, Hasibagan Borjihan, Sung-Suk Chae, Yungtai Lo, Hongling Zhao, Edward Schwartz, David Loeb, Rui Yang, David Geller, Deyou Zheng, Bang Hoang
Comprehensive single cell transcriptomics analysis of murine osteosarcoma uncovers Skp2 function in metastasis, genomic instability and immune activation and reveals additional target pathways. bioRxiv : the preprint server for biology (2024)
Alexander Ferrena, Ranxin Zhang, Jichuan Wang, Xiang Yu Zheng, Barlas Göker, Hasibagan Borjihan, Sung-Suk Chae, Yungtai Lo, Hongling Zhao, Edward Schwartz, David Loeb, Rui Yang, David Geller, Deyou Zheng, Bang Hoang
Comprehensive single cell transcriptomics analysis of murine osteosarcoma uncovers Skp2 function in metastasis, genomic instability and immune activation and reveals additional target pathways. bioRxiv : the preprint server for biology (2024)
Jichuan Wang, Alexander Ferrena, Ranxin Zhang, Swapnil Singh, Valentina Viscarret, Waleed Al-Harden, Osama Aldahamsheh, Hasibagan Borjihan, Amit Singla, Simon Yaguare, Janet Tingling, Xiaolin Zi, Yungtai Lo, Richard G Gorlick, Edward L Schwartz, Hongling Zhao, Rui Yang, David S Geller, Deyou Zheng, Bang H Hoang
Targeted inhibition of SCF SKP2 confers anti-tumor activities resulting in a survival benefit in osteosarcoma. Oncogene 43 (13) (2024)
Hao Wang, R Alejandro Sica, Gurbakhash Kaur, Phillip M Galbo, Zhixin Jing, Christopher D Nishimura, Xiaoxin Ren, Ankit Tanwar, Bijan Etemad-Gilbertson, Britta Will, Deyou Zheng, David Fooksman, Xingxing Zang
TMIGD2 is an orchestrator and therapeutic target on human acute myeloid leukemia stem cells. Nature communications 15 (1) (2024)
Alexander Ferrena, Xiang Yu Zheng, Kevyn Jackson, Bang Hoang, Bernice Morrow, Deyou Zheng
scDAPP: a comprehensive single-cell transcriptomics analysis pipeline optimized for cross-group comparison. bioRxiv : the preprint server for biology (2024)
Jichuan Wang, Alexander Ferrena, Ranxin Zhang, Swapnil Singh, Valentina Viscarret, Waleed Al-Harden, Osama Aldahamsheh, Hasibagan Borjihan, Amit Singla, Simon Yaguare, Janet Tingling, Xiaolin Zi, Yungtai Lo, Richard G Gorlick, Edward L Schwartz, Hongling Zhao, Rui Yang, David S Geller, Deyou Zheng, Bang H Hoang
Targeted inhibition of SCF SKP2 confers anti-tumor activities resulting in a survival benefit in osteosarcoma. Oncogene (2024)
Zhixin Jing, Phillip M Galbo, Luis Jose Ovando, Megan Demouth, Skylar Welte, Rosa Park, Kartik Chandran, Yinghao Wu, Thomas MacCarthy, Deyou Zheng, David R Fooksman
Fine-tuning spatial-temporal dynamics and surface receptor expression support plasma cell-intrinsic longevity. eLife 12 (2024)
Christopher D Nishimura, Devin T Corrigan, Xiang Yu Zheng, Phillip M Galbo, Shan Wang, Yao Liu, Yao Wei, Linna Suo, Wei Cui, Nadia Mercado, Deyou Zheng, Cheng Cheng Zhang, Xingxing Zang
TOP CAR with TMIGD2 as a safe and effective costimulatory domain in CAR cells treating human solid tumors. Science advances 10 (19) (2024)
Alexander Ferrena, Xiang Yu Zheng, Kevyn Jackson, Bang Hoang, Bernice Morrow, Deyou Zheng
scDAPP: a comprehensive single-cell transcriptomics analysis pipeline optimized for cross-group comparison. bioRxiv : the preprint server for biology (2024)
Anne Van Arsdale, Lauren Turker, Yoke-Chen Chang, Joshua Gould, Bryan Harmon, Elaine C Maggi, Olga Meshcheryakova, Maxwell P Brown, Dana Luong, Koenraad Van Doorslaer, Mark H Einstein, Dennis Y S Kuo, Deyou Zheng, Brian J Haas, Jack Lenz, Cristina Montagna
Structure and transcription of integrated HPV DNA in vulvar carcinomas. NPJ genomic medicine 9 (1) (2024)
Jichuan Wang, Alexander Ferrena, Ranxin Zhang, Swapnil Singh, Valentina Viscarret, Waleed Al-Harden, Osama Aldahamsheh, Hasibagan Borjihan, Amit Singla, Simon Yaguare, Janet Tingling, Xiaolin Zi, Yungtai Lo, Richard G Gorlick, Edward L Schwartz, Hongling Zhao, Rui Yang, David S Geller, Deyou Zheng, Bang H Hoang
Targeted inhibition of SCF SKP2 confers anti-tumor activities resulting in a survival benefit in osteosarcoma. Oncogene (2024)
Hao Wang, R Alejandro Sica, Gurbakhash Kaur, Phillip M Galbo, Zhixin Jing, Christopher D Nishimura, Xiaoxin Ren, Ankit Tanwar, Bijan Etemad-Gilbertson, Britta Will, Deyou Zheng, David Fooksman, Xingxing Zang
TMIGD2 is an orchestrator and therapeutic target on human acute myeloid leukemia stem cells. Nature communications 15 (1) (2024)
Jichuan Wang, Alexander Ferrena, Ranxin Zhang, Swapnil Singh, Valentina Viscarret, Waleed Al-Harden, Osama Aldahamsheh, Hasibagan Borjihan, Amit Singla, Simon Yaguare, Janet Tingling, Xiaolin Zi, Yungtai Lo, Richard G Gorlick, Edward L Schwartz, Hongling Zhao, Rui Yang, David S Geller, Deyou Zheng, Bang H Hoang
Targeted inhibition of SCF SKP2 confers anti-tumor activities resulting in a survival benefit in osteosarcoma. Oncogene 43 (13) (2024)
Christopher D Nishimura, Devin T Corrigan, Xiang Yu Zheng, Phillip M Galbo, Shan Wang, Yao Liu, Yao Wei, Linna Suo, Wei Cui, Nadia Mercado, Deyou Zheng, Cheng Cheng Zhang, Xingxing Zang
TOP CAR with TMIGD2 as a safe and effective costimulatory domain in CAR cells treating human solid tumors. Science advances 10 (19) (2024)
Kevin O'Leary, Deyou Zheng
Metacell-based differential expression analysis identifies cell type specific temporal gene response programs in COVID-19 patient PBMCs. NPJ systems biology and applications 10 (1) (2024)
Kevin O'Leary, Deyou Zheng
Metacell-based differential expression analysis identifies cell type specific temporal gene response programs in COVID-19 patient PBMCs. NPJ systems biology and applications 10 (1) (2024)
Anne Van Arsdale, Lauren Turker, Yoke-Chen Chang, Joshua Gould, Bryan Harmon, Elaine C Maggi, Olga Meshcheryakova, Maxwell P Brown, Dana Luong, Koenraad Van Doorslaer, Mark H Einstein, Dennis Y S Kuo, Deyou Zheng, Brian J Haas, Jack Lenz, Cristina Montagna
Structure and transcription of integrated HPV DNA in vulvar carcinomas. NPJ genomic medicine 9 (1) (2024)
Alexander Ferrena, Xiang Yu Zheng, Kevyn Jackson, Bang Hoang, Bernice Morrow, Deyou Zheng
scDAPP: a comprehensive single-cell transcriptomics analysis pipeline optimized for cross-group comparison. bioRxiv : the preprint server for biology (2024)
Minh Binh Nguyen, Pooja Flora, Meagan C Branch, Madison Weber, Xiang Yu Zheng, Unnikrishnan Sivan, Simon Joost, Karl Annusver, Deyou Zheng, Maria Kasper, Elena Ezhkova
Tenascin-C expressing touch dome keratinocytes exhibit characteristics of all epidermal lineages. Science advances 10 (3) (2024)
Anne Van Arsdale, Lauren Turker, Yoke-Chen Chang, Joshua Gould, Bryan Harmon, Elaine C Maggi, Olga Meshcheryakova, Maxwell P Brown, Dana Luong, Koenraad Van Doorslaer, Mark H Einstein, Dennis Y S Kuo, Deyou Zheng, Brian J Haas, Jack Lenz, Cristina Montagna
Structure and transcription of integrated HPV DNA in vulvar carcinomas. NPJ genomic medicine 9 (1) (2024)
Hao Wang, R Alejandro Sica, Gurbakhash Kaur, Phillip M Galbo, Zhixin Jing, Christopher D Nishimura, Xiaoxin Ren, Ankit Tanwar, Bijan Etemad-Gilbertson, Britta Will, Deyou Zheng, David Fooksman, Xingxing Zang
TMIGD2 is an orchestrator and therapeutic target on human acute myeloid leukemia stem cells. Nature communications 15 (1) (2024)
Rama Kadamb, Melisa Lopez Anton, Timothy J Purwin, Vivian Chua, Lornella Seeneevassen, Jessica Teh, M Angela Nieto, Takami Sato, Mizue Terai, Sergio Roman Roman, Leanne De Koning, Deyou Zheng, Andrew E Aplin, Julio Aguirre-Ghiso
Lineage commitment pathways epigenetically oppose oncogenic Gαq/11-YAP signaling in dormant disseminated uveal melanoma. bioRxiv : the preprint server for biology (2024)
Jichuan Wang, Alexander Ferrena, Ranxin Zhang, Swapnil Singh, Valentina Viscarret, Waleed Al-Harden, Osama Aldahamsheh, Hasibagan Borjihan, Amit Singla, Simon Yaguare, Janet Tingling, Xiaolin Zi, Yungtai Lo, Richard G Gorlick, Edward L Schwartz, Hongling Zhao, Rui Yang, David S Geller, Deyou Zheng, Bang H Hoang
Targeted inhibition of SCF SKP2 confers anti-tumor activities resulting in a survival benefit in osteosarcoma. Oncogene 43 (13) (2024)
Zhixin Jing, Phillip M Galbo, Luis Jose Ovando, Megan Demouth, Skylar Welte, Rosa Park, Kartik Chandran, Yinghao Wu, Thomas MacCarthy, Deyou Zheng, David R Fooksman
Fine-tuning spatial-temporal dynamics and surface receptor expression support plasma cell-intrinsic longevity. eLife 12 (2024)
Minh Binh Nguyen, Pooja Flora, Meagan C Branch, Madison Weber, Xiang Yu Zheng, Unnikrishnan Sivan, Simon Joost, Karl Annusver, Deyou Zheng, Maria Kasper, Elena Ezhkova
Tenascin-C expressing touch dome keratinocytes exhibit characteristics of all epidermal lineages. Science advances 10 (3) (2024)
Christopher D Nishimura, Devin T Corrigan, Xiang Yu Zheng, Phillip M Galbo, Shan Wang, Yao Liu, Yao Wei, Linna Suo, Wei Cui, Nadia Mercado, Deyou Zheng, Cheng Cheng Zhang, Xingxing Zang
TOP CAR with TMIGD2 as a safe and effective costimulatory domain in CAR cells treating human solid tumors. Science advances 10 (19) (2024)
Hao Wang, R Alejandro Sica, Gurbakhash Kaur, Phillip M Galbo, Zhixin Jing, Christopher D Nishimura, Xiaoxin Ren, Ankit Tanwar, Bijan Etemad-Gilbertson, Britta Will, Deyou Zheng, David Fooksman, Xingxing Zang
TMIGD2 is an orchestrator and therapeutic target on human acute myeloid leukemia stem cells. Nature communications 15 (1) (2024)
Jichuan Wang, Alexander Ferrena, Ranxin Zhang, Swapnil Singh, Valentina Viscarret, Waleed Al-Harden, Osama Aldahamsheh, Hasibagan Borjihan, Amit Singla, Simon Yaguare, Janet Tingling, Xiaolin Zi, Yungtai Lo, Richard G Gorlick, Edward L Schwartz, Hongling Zhao, Rui Yang, David S Geller, Deyou Zheng, Bang H Hoang
Targeted inhibition of SCF SKP2 confers anti-tumor activities resulting in a survival benefit in osteosarcoma. Oncogene 43 (13) (2024)
Zhixin Jing, Phillip M Galbo, Luis Jose Ovando, Megan Demouth, Skylar Welte, Rosa Park, Kartik Chandran, Yinghao Wu, Thomas MacCarthy, Deyou Zheng, David R Fooksman
Fine-tuning spatial-temporal dynamics and surface receptor expression support plasma cell-intrinsic longevity. eLife 12 (2024)
Jihong Cui, Chi Zhang, Ji-Eun Lee, Boris A Bartholdy, Dapeng Yang, Yu Liu, Piril Erler, Phillip M Galbo, Dayle Q Hodge, Danwei Huangfu, Deyou Zheng, Kai Ge, Wenjun Guo
MLL3 loss drives metastasis by promoting a hybrid epithelial-mesenchymal transition state. Nature cell biology 25 (1) (2023)
Jihong Cui, Chi Zhang, Ji-Eun Lee, Boris A Bartholdy, Dapeng Yang, Yu Liu, Piril Erler, Phillip M Galbo, Dayle Q Hodge, Danwei Huangfu, Deyou Zheng, Kai Ge, Wenjun Guo
MLL3 loss drives metastasis by promoting a hybrid epithelial-mesenchymal transition state. Nature cell biology 25 (1) (2023)
Jihong Cui, Chi Zhang, Ji-Eun Lee, Boris A Bartholdy, Dapeng Yang, Yu Liu, Piril Erler, Phillip M Galbo, Dayle Q Hodge, Danwei Huangfu, Deyou Zheng, Kai Ge, Wenjun Guo
MLL3 loss drives metastasis by promoting a hybrid epithelial-mesenchymal transition state. Nature cell biology 25 (1) (2023)
Yingjie Zhao, Yujue Wang, Lijie Shi, Donna M McDonald-McGinn, T Blaine Crowley, Daniel E McGinn, Oanh T Tran, Daniella Miller, Jhih-Rong Lin, Elaine H Zackai, H Richard Johnston, Eva W C Chow, Jacob A S Vorstman, Claudia Vingerhoets, Therese van Amelsvoort, Doron Gothelf, Ann Swillen, Jeroen Breckpot, Joris Robert Vermeesch, Stephan Eliez, Maude Schneider, Marianne B M van den Bree, Michael J Owen, Wendy R Kates, Gabriela M Repetto, Vandana Shashi, Kelly Schoch, Carrie E Bearden, M Cristina Digilio, Marta Unolt, Carolina Putotto, Bruno Marino, Maria Pontillo, Marco Armando, Stefano Vicari, Kathleen Angkustsiri, Linda Campbell, Tiffany Busa, Damian Heine-Suñer, Kieran C Murphy, Declan G M Murphy, Sixto García-Miñaúr, Luis Fernández, null null, Zhengdong D Zhang, Elizabeth Goldmuntz, Raquel E Gur, Beverly S Emanuel, Deyou Zheng, Christian R Marshall, Anne Susan Bassett, Tao Wang, Bernice E Morrow
Chromatin regulators in the TBX1 network confer risk for conotruncal heart defects in 22q11.2DS. NPJ genomic medicine 8 (1) (2023)
Jihong Cui, Chi Zhang, Ji-Eun Lee, Boris A Bartholdy, Dapeng Yang, Yu Liu, Piril Erler, Phillip M Galbo, Dayle Q Hodge, Danwei Huangfu, Deyou Zheng, Kai Ge, Wenjun Guo
MLL3 loss drives metastasis by promoting a hybrid epithelial-mesenchymal transition state. Nature cell biology 25 (1) (2023)
Christopher De Bono, Yang Liu, Alexander Ferrena, Aneesa Valentine, Deyou Zheng, Bernice E Morrow
Single-cell transcriptomics uncovers a non-autonomous Tbx1-dependent genetic program controlling cardiac neural crest cell development. Nature communications 14 (1) (2023)
Jihong Cui, Chi Zhang, Ji-Eun Lee, Boris A Bartholdy, Dapeng Yang, Yu Liu, Piril Erler, Phillip M Galbo, Dayle Q Hodge, Danwei Huangfu, Deyou Zheng, Kai Ge, Wenjun Guo
MLL3 loss drives metastasis by promoting a hybrid epithelial-mesenchymal transition state. Nature cell biology 25 (1) (2023)
Alexander Ferrena, Jichuan Wang, Ranxin Zhang, Burcu Karadal-Ferrena, Waleed Al-Hardan, Swapnil Singh, Hasibagan Borjihan, Edward L Schwartz, Hongling Zhao, Maja H Oktay, Rui Yang, David S Geller, Bang H Hoang, Deyou Zheng
SKP2 knockout in Rb1/p53 deficient mouse models of osteosarcoma induces immune infiltration and drives a transcriptional program with a favorable prognosis. Molecular cancer therapeutics (2023)
Jihong Cui, Chi Zhang, Ji-Eun Lee, Boris A Bartholdy, Dapeng Yang, Yu Liu, Piril Erler, Phillip M Galbo, Dayle Q Hodge, Danwei Huangfu, Deyou Zheng, Kai Ge, Wenjun Guo
MLL3 loss drives metastasis by promoting a hybrid epithelial-mesenchymal transition state. Nature cell biology (2023)
Jihong Cui, Chi Zhang, Ji-Eun Lee, Boris A Bartholdy, Dapeng Yang, Yu Liu, Piril Erler, Phillip M Galbo, Dayle Q Hodge, Danwei Huangfu, Deyou Zheng, Kai Ge, Wenjun Guo
MLL3 loss drives metastasis by promoting a hybrid epithelial-mesenchymal transition state. Nature cell biology 25 (1) (2023)
Jihong Cui, Chi Zhang, Ji-Eun Lee, Boris A Bartholdy, Dapeng Yang, Yu Liu, Piril Erler, Phillip M Galbo, Dayle Q Hodge, Danwei Huangfu, Deyou Zheng, Kai Ge, Wenjun Guo
MLL3 loss drives metastasis by promoting a hybrid epithelial-mesenchymal transition state. Nature cell biology 25 (1) (2023)
Maider Astorkia, Yang Liu, Erika M Pedrosa, Herbert M Lachman, Deyou Zheng
Molecular and network disruptions in neurodevelopment uncovered by single cell transcriptomics analysis of CHD8 heterozygous cerebral organoids. bioRxiv : the preprint server for biology (2023)
Zhixin Jing, Phillip Galbo, Luis Jose Ovando, Megan Demouth, Skylar Welte, Rosa Park, Kartik Chandran, Yinghao Wu, Thomas MacCarthy, Deyou Zheng, David R Fooksman
Fine-tuning spatial-temporal dynamics and surface receptor expression support plasma cell-intrinsic longevity. bioRxiv : the preprint server for biology (2023)
Ruoshui Li, Bijun Chen, Akihiko Kubota, Anis Hanna, Claudio Humeres, Silvia C Hernandez, Yang Liu, Richard Ma, Izabela Tuleta, Shuaibo Huang, Harikrishnan Venugopal, Fenglan Zhu, Kai Su, Jun Li, Jinghang Zhang, Deyou Zheng, Nikolaos G Frangogiannis
Protective effects of macrophage-specific integrin α5 in myocardial infarction are associated with accentuated angiogenesis. Nature communications 14 (1) (2023)
Jihong Cui, Chi Zhang, Ji-Eun Lee, Boris A Bartholdy, Dapeng Yang, Yu Liu, Piril Erler, Phillip M Galbo, Dayle Q Hodge, Danwei Huangfu, Deyou Zheng, Kai Ge, Wenjun Guo
MLL3 loss drives metastasis by promoting a hybrid epithelial-mesenchymal transition state. Nature cell biology 25 (1) (2023)
Jihong Cui, Chi Zhang, Ji-Eun Lee, Boris A Bartholdy, Dapeng Yang, Yu Liu, Piril Erler, Phillip M Galbo, Dayle Q Hodge, Danwei Huangfu, Deyou Zheng, Kai Ge, Wenjun Guo
MLL3 loss drives metastasis by promoting a hybrid epithelial-mesenchymal transition state. Nature cell biology 25 (1) (2023)
Phillip M Galbo, Anne Tranberg Madsen, Yang Liu, Mou Peng, Yao Wei, Michael J Ciesielski, Robert A Fenstermaker, Sarah Graff, Cristina Montagna, Jeffrey E Segall, Simone Sidoli, Xingxing Zang, Deyou Zheng
Functional Contribution and Clinical Implication of Cancer-Associated Fibroblasts in Glioblastoma. Clinical cancer research : an official journal of the American Association for Cancer Research (2023)
Jihong Cui, Chi Zhang, Ji-Eun Lee, Boris A Bartholdy, Dapeng Yang, Yu Liu, Piril Erler, Phillip M Galbo, Dayle Q Hodge, Danwei Huangfu, Deyou Zheng, Kai Ge, Wenjun Guo
MLL3 loss drives metastasis by promoting a hybrid epithelial-mesenchymal transition state. Nature cell biology 25 (1) (2023)
Christopher De Bono, Yang Liu, Alexander Ferrena, Aneesa Valentine, Deyou Zheng, Bernice E Morrow
Single-cell transcriptomics uncovers a non-autonomous Tbx1-dependent genetic program controlling cardiac neural crest cell development. Nature communications 14 (1) (2023)
Christopher De Bono, Yang Liu, Alexander Ferrena, Aneesa Valentine, Deyou Zheng, Bernice E Morrow
Single-cell transcriptomics uncovers a non-autonomous Tbx1-dependent genetic program controlling cardiac neural crest cell development. Nature communications 14 (1) (2023)
Zuen Ren, Huizhi Liang, Phillip M Galbo, Malindrie Dharmaratne, Ameya S Kulkarni, Atefeh Taherian Fard, Marie Louise Aoun, Nuria Martinez-Lopez, Kimita Suyama, Outhiriaradjou Benard, Wei Zheng, Yang Liu, Joseph Albanese, Deyou Zheng, Jessica C Mar, Rajat Singh, Michael B Prystowsky, Larry Norton, Rachel B Hazan
Redox signaling by glutathione peroxidase 2 links vascular modulation to metabolic plasticity of breast cancer. Proceedings of the National Academy of Sciences of the United States of America 119 (8) (2022)
Yao Wei, Xiaoxin Ren, Phillip M Galbo, Scott Moerdler, Hao Wang, R Alejandro Sica, Bijan Etemad-Gilbertson, Lei Shi, Liqiang Zhu, Xudong Tang, Qi Lin, Mou Peng, Fangxia Guan, Deyou Zheng, Jordan M Chinai, Xingxing Zang
KIR3DL3-HHLA2 is a human immunosuppressive pathway and a therapeutic target. Science immunology 6 (61) (2022)
Amish J Patel, Sarah Warda, Jesper L V Maag, Rohan Misra, Miguel A Miranda-Román, Mohini R Pachai, Cindy J Lee, Dan Li, Naitao Wang, Gabriella Bayshtok, Eve Fishinevich, Yinuo Meng, Elissa W P Wong, Juan Yan, Emily Giff, Melissa B Pappalardi, Michael T McCabe, Jonathan A Fletcher, Charles M Rudin, Sarat Chandarlapaty, Joseph Michael Scandura, Richard P Koche, Jacob Lowell Glass, Cristina R Antonescu, Deyou Zheng, Juliet Chen, Ping Chi
PRC2-Inactivating Mutations in Cancer Enhance Cytotoxic Response to DNMT1-Targeted Therapy via Enhanced Viral Mimicry. Cancer discovery 12 (9) (2022)
Peter John, Marc C Pulanco, Phillip M Galbo, Yao Wei, Kim C Ohaegbulam, Deyou Zheng, Xingxing Zang
The immune checkpoint B7x expands tumor-infiltrating Tregs and promotes resistance to anti-CTLA-4 therapy. Nature communications 13 (1) (2022)
Richard T Piszczatowski, Emily Schwenger, Sriram Sundaravel, Catarina M Stein, Yang Liu, Pamela Stanley, Amit K Verma, Deyou Zheng, Ronald D Seidel, Steven C Almo, Robert A Townley, Hannes E Bülow, Ulrich Steidl
A glycan-based approach to cell characterization and isolation: Hematopoiesis as a paradigm. The Journal of experimental medicine 219 (11) (2022)
Pengfei Lu, Ping Wang, Bingruo Wu, Yidong Wang, Yang Liu, Wei Cheng, Xuhui Feng, Xinchun Yuan, Miriam M Atteya, Haleigh Ferro, Yukiko Sugi, Grant Rydquist, Mahdi Esmaily, Jonathan T Butcher, Ching-Pin Chang, Jack Lenz, Deyou Zheng, Bin Zhou
A SOX17-PDGFB signaling axis regulates aortic root development. Nature communications 13 (1) (2022)
Maider Astorkia, Herbert M Lachman, Deyou Zheng
Characterization of cell-cell communication in autistic brains with single-cell transcriptomes. Journal of neurodevelopmental disorders 14 (1) (2022)
Elodie Picarda, Phillip M Galbo, Haihong Zong, Meenu Rohini Rajan, Ville Wallenius, Deyou Zheng, Rajat Singh, Jeffrey E Pessin, Xingxing Zang
The immune checkpoint B7-H3 (CD276) regulates adipocyte progenitor metabolism and obesity development. Science advances 8 (17) (2022)
Vinod Kumar Singh, Rohan Misra, Steven C Almo, Ulrich G Steidl, Hannes E Bülow, Deyou Zheng
HSMotifDiscover: identification of motifs in sequences composed of non-single-letter elements. Bioinformatics (Oxford, England) 38 (16) (2022)
Liyang Ma, Qin Tang, Xin Gao, Joun Lee, Run Lei, Masako Suzuki, Deyou Zheng, Keisuke Ito, Paul Sylvain Frenette, Meelad M Dawlaty
Tet-mediated DNA demethylation regulates specification of hematopoietic stem and progenitor cells during mammalian embryogenesis. Science advances 8 (9) (2022)
Feng Wang, Yang Liu, Wanglong Qiu, Elaine Shum, Monica Feng, Dejian Zhao, Deyou Zheng, Alain Borczuk, Haiying Cheng, Balazs Halmos
Functional Analysis of MET Exon 14 Skipping Alteration in Cancer Invasion and Metastatic Dissemination. Cancer research 82 (7) (2022)
Stephanie Chrysanthou, Qin Tang, Joun Lee, Samuel J Taylor, Yilin Zhao, Ulrich Steidl, Deyou Zheng, Meelad M Dawlaty
The DNA dioxygenase Tet1 regulates H3K27 modification and embryonic stem cell biology independent of its catalytic activity. Nucleic acids research 50 (6) (2022)
Hiroko Nomaru, Yang Liu, Christopher De Bono, Dario Righelli, Andrea Cirino, Wei Wang, Hansoo Song, Silvia E Racedo, Anelisa G Dantas, Lu Zhang, Chen-Leng Cai, Claudia Angelini, Lionel A Christiaen, Robert G Kelly, Antonio Baldini, Deyou Zheng, Bernice E Morrow
Single cell multi-omic analysis identifies a Tbx1-dependent multilineage primed population in murine cardiopharyngeal mesoderm. Nature communications 12 (1) (2021)
Phillip M Galbo, Xingxing Zang, Deyou Zheng
Molecular Features of Cancer-associated Fibroblast Subtypes and their Implication on Cancer Pathogenesis, Prognosis, and Immunotherapy Resistance. Clinical cancer research : an official journal of the American Association for Cancer Research 27 (9) (2021)
Lianzhong Zhao, Pengcheng Zhang, Phillip M Galbo, Xinyue Zhou, Sajesan Aryal, Shaowei Qiu, Hao Zhang, Yang Zhou, Chunliang Li, Deyou Zheng, Ravi Bhatia, Rui Lu
Transcription factor MEF2D is required for the maintenance of MLL-rearranged acute myeloid leukemia. Blood advances 5 (22) (2021)
Pooja Flora, Meng-Yen Li, Phillip M Galbo, Maider Astorkia, Deyou Zheng, Elena Ezhkova
Polycomb repressive complex 2 in adult hair follicle stem cells is dispensable for hair regeneration. PLoS genetics 17 (12) (2021)
Chenxi Xu, Yi-Hsuan Tsai, Phillip M Galbo, Gang Greg Wang, Aaron J Storey, Yuemei Xu, Stephanie D Byrum, Lingfan Xu, Young E Whang, Joel S Parker, Samuel G Mackintosh, Ricky D Edmondson, Alan J Tackett, Jiaoti Huang, Deyou Zheng, H Shelton Earp, Gang Greg Wang, Ling Cai
Cistrome analysis of YY1 uncovers a regulatory axis of YY1:BRD2/4-PFKP during tumorigenesis of advanced prostate cancer. Nucleic acids research 49 (9) (2021)
Pengfei Lu, Yidong Wang, Yang Liu, Yifeng Wang, Bingruo Wu, Deyou Zheng, Richard P Harvey, Bin Zhou
Perinatal angiogenesis from pre-existing coronary vessels via DLL4-NOTCH1 signalling. Nature cell biology 23 (9) (2021)
Yang Liu, Tao Wang, Bin Zhou, Deyou Zheng
Robust integration of multiple single-cell RNA sequencing datasets using a single reference space. Nature biotechnology 39 (7) (2021)
Jeong Hyun Ahn, Eric S Davis, Timothy A Daugird, Shuai Zhao, Ivana Yoseli Quiroga-Barber, Hidetaka Uryu, Jie Li, Aaron J Storey, Yi-Hsuan Tsai, Daniel P Keeley, Samuel G Mackintosh, Ricky D Edmondson, Stephanie D Byrum, Ling Cai, Alan J Tackett, Deyou Zheng, Wesley R Legant, Douglas H Phanstiel, Gang Greg Wang
Phase separation drives aberrant chromatin looping and cancer development. Nature 595 (7868) (2021)
Jie Li, Phillip M Galbo, Weida Gong, Aaron J Storey, Yi-Hsuan Tsai, Xufen Yu, Jeong Hyun Ahn, Yiran Guo, Samuel G Mackintosh, Ricky D Edmondson, Stephanie D Byrum, Jason E Farrar, Shenghui He, Ling Cai, Jian Jin, Alan J Tackett, Deyou Zheng, Gang Greg Wang
ZMYND11-MBTD1 induces leukemogenesis through hijacking NuA4/TIP60 acetyltransferase complex and a PWWP-mediated chromatin association mechanism. Nature communications 12 (1) (2021)
Rene C Adam, Hanseul Yang, Yejing Ge, Nicole R Infarinato, Shiri Gur-Cohen, Yuxuan Miao, Ping Wang, Yilin Zhao, Catherine P Lu, Jeong Eun Kim, Joo Y Ko, Seung S Paik, Richard M Gronostajski, Jaehwan Kim, James G Krueger, Deyou Zheng, Elaine Fuchs
NFI transcription factors provide chromatin access to maintain stem cell identity while preventing unintended lineage fate choices. Nature cell biology 22 (6) (2020)
Eugine Lee, John Wongvipat, Danielle Choi, Ping Wang, Young Sun Lee, Deyou Zheng, Philip A Watson, Anuradha Gopalan, Charles L Sawyers
GREB1 amplifies androgen receptor output in human prostate cancer and contributes to antiandrogen resistance. eLife 8 (2019)
Zhejun Ji, Marianthi Kiparaki, Virginia Folgado, Amit Kumar, Jorge Blanco, Gerard Rimesso, Jacky Chuen, Yang Liu, Deyou Zheng, Nicholas E Baker
Drosophila RpS12 controls translation, growth, and cell competition through Xrp1. PLoS genetics 15 (12) (2019)
Donghong Zhang, Yidong Wang, Pengfei Lu, Ping Wang, Xinchun Yuan, Jianyun Yan, Chenleng Cai, Ching-Pin Chang, Deyou Zheng, Bingruo Wu, Bin Zhou
Author Correction: REST regulates the cell cycle for cardiac development and regeneration. Nature communications 9 (1) (2018)
Ping Wang, Dejian Zhao, Herbert M Lachman, Deyou Zheng
Enriched expression of genes associated with autism spectrum disorders in human inhibitory neurons. Translational psychiatry 8 (1) (2018)
Yidan Zhang, Yoav S Zvi, Brian Batko, Nikolas Zaphiros, Edmond F O'Donnell, Jichuan Wang, Kenji Sato, Rui Yang, David S Geller, Pratistha Koirala, Wendong Zhang, Xiuquan Du, Sajida Piperdi, Yang Liu, Deyou Zheng, Michael Roth, Jonathan Gill, Jinghang Zhang, Tingting Ren, Richard Gorlick, Xiaolin Zi, Bang H Hoang
Down-regulation of Skp2 expression inhibits invasion and lung metastasis in osteosarcoma. Scientific reports 8 (1) (2018)
Mahima Tibrewal, Bokun Cheng, Preeti Dohare, Furong Hu, Rana Mehdizadeh, Ping Wang, Deyou Zheng, Zoltan Ungvari, Praveen Ballabh
Disruption of Interneuron Neurogenesis in Premature Newborns and Reversal with Estrogen Treatment. The Journal of neuroscience : the official journal of the Society for Neuroscience 38 (5) (2017)
Neel Shah, Ping Wang, John Wongvipat, Wouter R Karthaus, Wassim Abida, Joshua Armenia, Shira Rockowitz, Yotam Drier, Bradley E Bernstein, Henry W Long, Matthew L Freedman, Vivek K Arora, Deyou Zheng, Charles L Sawyers
Regulation of the glucocorticoid receptor via a BET-dependent enhancer drives antiandrogen resistance in prostate cancer. eLife 6 (2017)
Silvia E Racedo, Erica Hasten, Mingyan Lin, Gnanapackiam Sheela Devakanmalai, Tingwei Guo, Ertugrul M Ozbudak, Chen-Leng Cai, Deyou Zheng, Bernice E Morrow
Reduced dosage of β-catenin provides significant rescue of cardiac outflow tract anomalies in a Tbx1 conditional null mouse model of 22q11.2 deletion syndrome. PLoS genetics 13 (3) (2017)
Donghong Zhang, Yidong Wang, Pengfei Lu, Ping Wang, Xinchun Yuan, Jianyun Yan, Chenleng Cai, Ching-Pin Chang, Deyou Zheng, Bingruo Wu, Bin Zhou
REST regulates the cell cycle for cardiac development and regeneration. Nature communications 8 (1) (2017)
Carolina N Perdigoto, Katherine L Dauber, Carmit Bar, Pai-Chi Tsai, Victor J Valdes, Idan Cohen, Francis J Santoriello, Dejian Zhao, Deyou Zheng, Ya-Chieh Hsu, Elena Ezhkova
Polycomb-Mediated Repression and Sonic Hedgehog Signaling Interact to Regulate Merkel Cell Specification during Skin Development. PLoS genetics 12 (7) (2016)
Mingyan Lin, Erika Pedrosa, Anastasia Hrabovsky, Jian Chen, Benjamin R Puliafito, Stephanie R Gilbert, Deyou Zheng, Herbert M Lachman
Integrative transcriptome network analysis of iPSC-derived neurons from schizophrenia and schizoaffective disorder patients with 22q11.2 deletion. BMC systems biology 10 (1) (2016)
William Lee, Sewit Teckie, Thomas Wiesner, Leili Ran, Carlos N Prieto Granada, Mingyan Lin, Sinan Zhu, Zhen Cao, Yupu Liang, Andrea Sboner, William D Tap, Jonathan A Fletcher, Kety H Huberman, Li-Xuan Qin, Agnes Viale, Samuel Singer, Deyou Zheng, Michael F Berger, Yu Chen, Cristina R Antonescu, Ping Chi
PRC2 is recurrently inactivated through EED or SUZ12 loss in malignant peripheral nerve sheath tumors. Nature genetics 46 (11) (2014)

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Deyou Zheng