Yiping Qi

ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 56

Top Venues

Plant biotechnology journal

Nature plants

Genome biology

Plant physiology

East Carolina University

University of Minnesota Twin Cities (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

East Carolina University Aug 15 2013 - Dec 18 2016

United States

Assistant professor :: Biology

University of Minnesota Twin Cities Nov 02 2009 - Aug 31 2013

United States

Post-doc research associate :: Genetics, Cell biology and Development

Education History

University of Minnesota Twin Cities Sep 01 2003 - Oct 31 2009

United States

PHD :: Plant Biology

Shanghai Jiao Tong University Sep 01 2000 - Mar 30 2003

China

MSC :: Biochemistry and Molecular biology

Nankai University Sep 01 1996 - Jun 16 2000

China

BSC :: Microbiology

Publications

Xiaoyu Wang, Tyson Fang, Jason Lu, Jaindra Nath Tripathi, Yiping Qi
Broad range plastid genome editing with monomeric TALE-linked cytosine and dual base editors. Plant biotechnology journal 22 (9) (2024)
Yao He, Yangshuo Han, Yanqin Ma, Shishi Liu, Tingting Fan, Yanling Liang, Xu Tang, Xuelian Zheng, Yuechao Wu, Alexandre P Marand, Yiping Qi, Yong Zhang
Expanding plant genome editing scope and profiles with CRISPR-FrCas9 systems targeting palindromic TA sites. Plant biotechnology journal 22 (9) (2024)
Xiaoyu Wang, Tyson Fang, Jason Lu, Jaindra Nath Tripathi, Yiping Qi
Broad range plastid genome editing with monomeric TALE-linked cytosine and dual base editors. Plant biotechnology journal (2024)
Xu Tang, Ayman Eid, Rui Zhang, Yanhao Cheng, Annan Liu, Yurong Chen, Pengxu Chen, Yong Zhang, Yiping Qi
Genome editing in rice and tomato with a small Un1Cas12f1 nuclease. The plant genome 17 (2) (2024)
Xu Tang, Ayman Eid, Rui Zhang, Yanhao Cheng, Annan Liu, Yurong Chen, Pengxu Chen, Yong Zhang, Yiping Qi
Genome editing in rice and tomato with a small Un1Cas12f1 nuclease. The plant genome 17 (2) (2024)
Xu Tang, Ayman Eid, Rui Zhang, Yanhao Cheng, Annan Liu, Yurong Chen, Pengxu Chen, Yong Zhang, Yiping Qi
Genome editing in rice and tomato with a small Un1Cas12f1 nuclease. The plant genome (2024)
Tingting Fan, Yanhao Cheng, Yuechao Wu, Shishi Liu, Xu Tang, Yao He, Shanyue Liao, Xuelian Zheng, Alexandre P Marand, Yiping Qi, Yong Zhang
High performance TadA-8e derived cytosine and dual base editors with undetectable off-target effects in plants. Nature communications 15 (1) (2024)
Yao He, Yangshuo Han, Yanqin Ma, Shishi Liu, Tingting Fan, Yanling Liang, Xu Tang, Xuelian Zheng, Yuechao Wu, Alexandre P Marand, Yiping Qi, Yong Zhang
Expanding plant genome editing scope and profiles with CRISPR-FrCas9 systems targeting palindromic TA sites. Plant biotechnology journal 22 (9) (2024)
Innocent Byiringiro, Changtian Pan, Yiping Qi
Orthogonal genome editing and transcriptional activation in tomato using CRISPR-Combo systems. Plant cell reports 43 (9) (2024)
Xiaoyu Wang, Tyson Fang, Jason Lu, Jaindra Nath Tripathi, Yiping Qi
Broad range plastid genome editing with monomeric TALE-linked cytosine and dual base editors. Plant biotechnology journal 22 (9) (2024)
Tingting Fan, Yanhao Cheng, Yuechao Wu, Shishi Liu, Xu Tang, Yao He, Shanyue Liao, Xuelian Zheng, Alexandre P Marand, Yiping Qi, Yong Zhang
High performance TadA-8e derived cytosine and dual base editors with undetectable off-target effects in plants. Nature communications 15 (1) (2024)
Yao He, Yangshuo Han, Yanqin Ma, Shishi Liu, Tingting Fan, Yanling Liang, Xu Tang, Xuelian Zheng, Yuechao Wu, Alexandre P Marand, Yiping Qi, Yong Zhang
Expanding plant genome editing scope and profiles with CRISPR-FrCas9 systems targeting palindromic TA sites. Plant biotechnology journal 22 (9) (2024)
Yao He, Yangshuo Han, Yanqin Ma, Shishi Liu, Tingting Fan, Yanling Liang, Xu Tang, Xuelian Zheng, Yuechao Wu, Alexandre P Marand, Yiping Qi, Yong Zhang
Expanding plant genome editing scope and profiles with CRISPR-FrCas9 systems targeting palindromic TA sites. Plant biotechnology journal 22 (9) (2024)
Xiaoyu Wang, Tyson Fang, Jason Lu, Jaindra Nath Tripathi, Yiping Qi
Broad range plastid genome editing with monomeric TALE-linked cytosine and dual base editors. Plant biotechnology journal 22 (9) (2024)
Tingting Fan, Yanhao Cheng, Yuechao Wu, Shishi Liu, Xu Tang, Yao He, Shanyue Liao, Xuelian Zheng, Alexandre P Marand, Yiping Qi, Yong Zhang
High performance TadA-8e derived cytosine and dual base editors with undetectable off-target effects in plants. Nature communications 15 (1) (2024)
Yao He, Yangshuo Han, Yanqin Ma, Shishi Liu, Tingting Fan, Yanling Liang, Xu Tang, Xuelian Zheng, Yuechao Wu, Alexandre P Marand, Yiping Qi, Yong Zhang
Expanding plant genome editing scope and profiles with CRISPR-FrCas9 systems targeting palindromic TA sites. Plant biotechnology journal (2024)
Changtian Pan, Yiping Qi
CRISPR-Combo-mediated orthogonal genome editing and transcriptional activation for plant breeding. Nature protocols (2023)
Simon Sretenovic, Yumi Green, Yuechao Wu, Yanhao Cheng, Alexandre P Marand, Joyce Van Eck, Yiping Qi
Genome- and transcriptome-wide off-target analyses of a high-efficiency adenine base editor in tomato. Plant physiology (2023)
Jianping Zhou, Guanqing Liu, Yuxin Zhao, Rui Zhang, Xu Tang, Ling Li, Xinyu Jia, Yachong Guo, Yuechao Wu, Yangshuo Han, Bao Yu, Yao He, Qinqin Han, Han Yang, Xuelian Zheng, Yiping Qi, Alexandre P Marand, Yong Zhang
An efficient CRISPR-Cas12a promoter editing system for crop improvement. Nature plants (2023)
Zhaohui Zhong, Guanqing Liu, Zhongjie Tang, Shuyue Xiang, Liang Yang, Lan Huang, Yao He, Tingting Fan, Shishi Liu, Xuelian Zheng, Alexandre P Marand, Yiping Qi, Jian Huang, Yong Zhang
Efficient plant genome engineering using a probiotic sourced CRISPR-Cas9 system. Nature communications 14 (1) (2023)
Liyang Zhang, Gen Li, Yingxiao Zhang, Yanhao Cheng, Nathaniel Roberts, Steve E Glenn, Diane DeZwaan-McCabe, H Tomas Rube, Jeff Manthey, Gary Coleman, Christopher A Vakulskas, Yiping Qi
Boosting genome editing efficiency in human cells and plants with novel LbCas12a variants. Genome biology 24 (1) (2023)
Changtian Pan, Yiping Qi
CRISPR-Combo-mediated orthogonal genome editing and transcriptional activation for plant breeding. Nature protocols (2023)
Liyang Zhang, Gen Li, Yingxiao Zhang, Yanhao Cheng, Nathaniel Roberts, Steve E Glenn, Diane DeZwaan-McCabe, H Tomas Rube, Jeff Manthey, Gary Coleman, Christopher A Vakulskas, Yiping Qi
Boosting genome editing efficiency in human cells and plants with novel LbCas12a variants. Genome biology 24 (1) (2023)
Changtian Pan, Yiping Qi
CRISPR-Combo-mediated orthogonal genome editing and transcriptional activation for plant breeding. Nature protocols (2023)
Liyang Zhang, Gen Li, Yingxiao Zhang, Yanhao Cheng, Nathaniel Roberts, Steve E Glenn, Diane DeZwaan-McCabe, H Tomas Rube, Jeff Manthey, Gary Coleman, Christopher A Vakulskas, Yiping Qi
Boosting genome editing efficiency in human cells and plants with novel LbCas12a variants. Genome biology 24 (1) (2023)
Liyang Zhang, Gen Li, Yingxiao Zhang, Yanhao Cheng, Nathaniel Roberts, Steve E Glenn, Diane DeZwaan-McCabe, H Tomas Rube, Jeff Manthey, Gary Coleman, Christopher A Vakulskas, Yiping Qi
Boosting genome editing efficiency in human cells and plants with novel LbCas12a variants. Genome biology 24 (1) (2023)
Changtian Pan, Yiping Qi
CRISPR-Combo-mediated orthogonal genome editing and transcriptional activation for plant breeding. Nature protocols (2023)
Degao Liu, Shuya Xuan, Lynn E Prichard, Lilee I Donahue, Changtian Pan, Ugrappa Nagalakshmi, Evan E Ellison, Colby G Starker, Savithramma P Dinesh-Kumar, Yiping Qi, Daniel F Voytas
Heritable base-editing in Arabidopsis using RNA viral vectors. Plant physiology 189 (4) (2022)
Changtian Pan, Gen Li, Aimee A Malzahn, Yanhao Cheng, Benjamin Leyson, Simon Sretenovic, Filiz Gurel, Gary D Coleman, Yiping Qi
Boosting plant genome editing with a versatile CRISPR-Combo system. Nature plants 8 (5) (2022)
Yanhao Cheng, Simon Sretenovic, Yingxiao Zhang, Changtian Pan, Ji Huang, Yiping Qi
Expanding the targeting scope of FokI-dCas nuclease systems with SpRY and Mb2Cas12a. Biotechnology journal 17 (7) (2022)
Yuechao Wu, Qiurong Ren, Zhaohui Zhong, Guanqing Liu, Yangshuo Han, Yu Bao, Li Liu, Shuyue Xiang, Shuo Liu, Xu Tang, Jianping Zhou, Xuelian Zheng, Simon Sretenovic, Alexandre P Marand, Yiping Qi, Yong Zhang
Genome-wide analyses of PAM-relaxed Cas9 genome editors reveal substantial off-target effects by ABE8e in rice. Plant biotechnology journal 20 (9) (2022)
Simon Sretenovic, Yiping Qi
Plant prime editing goes prime. Nature plants 8 (1) (2022)
Linnell Bentley Randall, Simon Sretenovic, Yuechao Wu, Desuo Yin, Alexandre P Marand, Joyce Van Eck, Yiping Qi
Genome- and transcriptome-wide off-target analyses of an improved cytosine base editor. Plant physiology 187 (1) (2022)
Filiz Gurel, Yuechao Wu, Changtian Pan, Yanhao Cheng, Gen Li, Tao Zhang, Yiping Qi
On- and Off-Target Analyses of CRISPR-Cas12b Genome Editing Systems in Rice. The CRISPR journal (2022)
Yingxiao Zhang, Yuechao Wu, Gen Li, Aileen Qi, Yong Zhang, Tao Zhang, Yiping Qi
Genome-wide investigation of multiplexed CRISPR-Cas12a-mediated editing in rice. The plant genome (2022)
Yingxiao Zhang, Qiurong Ren, Xu Tang, Shishi Liu, Aimee A Malzahn, Jianping Zhou, Jiaheng Wang, Desuo Yin, Changtian Pan, Mingzhu Yuan, Lan Huang, Han Yang, Yuxin Zhao, Qing Fang, Xuelian Zheng, Li Tian, Yanhao Cheng, Ysa Le, Bailey McCoy, Lidiya Franklin, Jeremy D Selengut, Stephen M Mount, Qiudeng Que, Yong Zhang, Yiping Qi
Expanding the scope of plant genome engineering with Cas12a orthologs and highly multiplexable editing systems. Nature communications 12 (1) (2021)
Shujuan Zhang, Rongzhi Zhang, Jie Gao, Guoqi Song, Jihu Li, Wei Li, Yiping Qi, Yulian Li, Genying Li
CRISPR/Cas9-mediated genome editing for wheat grain quality improvement. Plant biotechnology journal 19 (9) (2021)
Gen Li, Simon Sretenovic, Edward Eisenstein, Gary Coleman, Yiping Qi
Highly efficient C-to-T and A-to-G base editing in a Populus hybrid. Plant biotechnology journal 19 (6) (2021)
Qiurong Ren, Simon Sretenovic, Shishi Liu, Xu Tang, Lan Huang, Yao He, Li Liu, Yachong Guo, Zhaohui Zhong, Guanqing Liu, Yanhao Cheng, Xuelian Zheng, Changtian Pan, Desuo Yin, Yingxiao Zhang, Wanfeng Li, Liwang Qi, Chenghao Li, Yiping Qi, Yong Zhang
PAM-less plant genome editing using a CRISPR-SpRY toolbox. Nature plants 7 (1) (2021)
Shaun J Curtin, Yiping Qi, Lázaro Eustáquio Pereira Peres, Alisdair Robert Fernie, Agustin Zsögön
Pathways to de novo domestication of crop wild relatives. Plant physiology (2021)
Changtian Pan, Xincheng Wu, Kasey Markel, Aimee A Malzahn, Neil Kundagrami, Simon Sretenovic, Yingxiao Zhang, Yanhao Cheng, Patrick M Shih, Yiping Qi
CRISPR-Act3.0 for highly efficient multiplexed gene activation in plants. Nature plants 7 (7) (2021)
Tomasz Oleszkiewicz, Magdalena Klimek-Chodacka, Michał Kruczek, Kamila Godel-Jędrychowska, Katarzyna Sala, Anna Milewska-Hendel, Maciej Zubko, Ewa Urszula Kurczynska, Yiping Qi, Rafał Barański
Inhibition of Carotenoid Biosynthesis by CRISPR/Cas9 Triggers Cell Wall Remodelling in Carrot. International journal of molecular sciences 22 (12) (2021)
Kutubuddin Ali Molla, Simon Sretenovic, Kailash C Bansal, Yiping Qi
Precise plant genome editing using base editors and prime editors. Nature plants 7 (9) (2021)
Jianping Zhou, Mingzhu Yuan, Yuxin Zhao, Quan Quan, Dong Yu, Han Yang, Xu Tang, Xuhui Xin, Guangze Cai, Qian Qian, Yiping Qi, Yong Zhang
Efficient deletion of multiple circle RNA loci by CRISPR-Cas9 reveals Os06circ02797 as a putative sponge for OsMIR408 in rice. Plant biotechnology journal 19 (6) (2021)
Qiurong Ren, Simon Sretenovic, Guanqing Liu, Zhaohui Zhong, Jiaheng Wang, Lan Huang, Xu Tang, Yachong Guo, Li Liu, Yuechao Wu, Jie Zhou, Yuxin Zhao, Han Yang, Yao He, Shishi Liu, Desuo Yin, Rocio Mayorga, Xuelian Zheng, Alexandre P Marand, Yiping Qi, Yong Zhang
Improved plant cytosine base editors with high editing activity, purity, and specificity. Plant biotechnology journal 19 (10) (2021)
Jianping Zhou, Rui Zhang, Xinyu Jia, Xu Tang, Yachong Guo, Han Yang, Xuelian Zheng, Qian Qian, Yiping Qi, Yong Zhang
CRISPR-Cas9 mediated OsMIR168a knockout reveals its pleiotropy in rice. Plant biotechnology journal (2021)
Yuechao Wu, Yao He, Simon Sretenovic, Shishi Liu, Yanhao Cheng, Yangshuo Han, Guanqing Liu, Yu Bao, Qing Fang, Xuelian Zheng, Jianping Zhou, Yiping Qi, Yong Zhang, Alexandre P Marand
CRISPR-BETS: a base-editing design tool for generating stop codons. Plant biotechnology journal (2021)
Yingxiao Zhang, Yiping Qi
Diverse Systems for Efficient Sequence Insertion and Replacement in Precise Plant Genome Editing. Biodesign research 2020 (2020)
Jihu Li, Shujuan Zhang, Rongzhi Zhang, Jie Gao, Yiping Qi, Guoqi Song, Wei Li, Yulian Li, Genying Li
Efficient multiplex genome editing by CRISPR/Cas9 in common wheat. Plant biotechnology journal 19 (3) (2020)
Meiling Ming, Qiurong Ren, Changtian Pan, Yao He, Yingxiao Zhang, Shishi Liu, Zhaohui Zhong, Jiaheng Wang, Aimee A Malzahn, Jun Wu, Xuelian Zheng, Yong Zhang, Yiping Qi
CRISPR-Cas12b enables efficient plant genome engineering. Nature plants 6 (3) (2020)
Filiz Gürel, Yingxiao Zhang, Simon Sretenovic, Yiping Qi
CRISPR-Cas nucleases and base editors for plant genome editing. aBIOTECH 1 (1) (2019)
Shaoya Li, Yingxiao Zhang, Lanqin Xia, Yiping Qi
CRISPR-Cas12a enables efficient biallelic gene targeting in rice. Plant biotechnology journal 18 (6) (2019)
Yingxiao Zhang, Yiping Qi
CRISPR enables directed evolution in plants. Genome biology 20 (1) (2019)
Aimee A Malzahn, Xu Tang, Keunsub Lee, Qiurong Ren, Simon Sretenovic, Yingxiao Zhang, Hongqiao Chen, Minjeong Kang, Yu Bao, Xuelian Zheng, Kejun Deng, Tao Zhang, Valeria Salcedo, Kan Wang, Yong Zhang, Yiping Qi
Application of CRISPR-Cas12a temperature sensitivity for improved genome editing in rice, maize, and Arabidopsis. BMC biology 17 (1) (2019)
Yingxiao Zhang, Aimee A Malzahn, Simon Sretenovic, Yiping Qi
The emerging and uncultivated potential of CRISPR technology in plant science. Nature plants 5 (8) (2019)
Jianping Zhou, Xuhui Xin, Yao He, Hongqiao Chen, Qian Li, Xu Tang, Zhaohui Zhong, Kejun Deng, Xuelian Zheng, Sayed Abdul Akher, Guangze Cai, Yiping Qi, Yong Zhang
Multiplex QTL editing of grain-related genes improves yield in elite rice varieties. Plant cell reports 38 (4) (2018)
Levi G Lowder, Dengwei Zhang, Nicholas J Baltes, Joseph W Paul, Xu Tang, Xuelian Zheng, Daniel F Voytas, Tzung-Fu Hsieh, Yong Zhang, Yiping Qi
A CRISPR/Cas9 Toolbox for Multiplexed Plant Genome Editing and Transcriptional Regulation. Plant physiology 169 (2) (2015)

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Publication Activity (10 Years)

Top Topics

Top Venues

Yiping Qi