Alistair Nicol Boettiger (Alistair N Boettiger, Alistair Boettiger)

ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 18

Top Venues

Nature genetics

bioRxiv : the preprint server for biology

Nature protocols

Science (New York, N.Y.)

Stanford School of Medicine

UC Berkeley (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Stanford School of Medicine Sep 01 2016

United States

Assistant Professor :: Developmental Biology

Education History

UC Berkeley

United States

PHD :: Biophysics

Publications

Derek J Le, Antonina Hafner, Sadhana Gaddam, Kevin C Wang, Alistair Nicol Boettiger
Super-enhancer interactomes from single cells link clustering and transcription. bioRxiv : the preprint server for biology (2024)
Tzu-Chiao Hung, David M Kingsley, Alistair Nicol Boettiger
Boundary stacking interactions enable cross-TAD enhancer-promoter communication during limb development. Nature genetics 56 (2) (2024)
Tzu-Chiao Hung, David M Kingsley, Alistair Nicol Boettiger
Boundary stacking interactions enable cross-TAD enhancer-promoter communication during limb development. Nature genetics (2024)
Sedona Eve Murphy, Alistair Nicol Boettiger
Polycomb repression of Hox genes involves spatial feedback but not domain compaction or phase transition. Nature genetics 56 (3) (2024)
Nikki Bialy, Frank Alber, Brenda J Andrews, Michael Angelo, Brian J Beliveau, Lacramioara Bintu, Alistair Nicol Boettiger, Ulrike Boehm, Claire M Brown, Mahmoud Bukar Maina, James J Chambers, Beth A Cimini, Kevin W Eliceiri, Rachel Errington, Orestis Faklaris, Nathalie Gaudreault, Ronald N Germain, Wojtek J Goscinski, David Grünwald, Michael Halter, Dorit Hanein, John W Hickey, Judith Lacoste, Alex Laude, Emma Lundberg, Jian Ma, Leonel Malacrida, Josh Moore, Glyn Nelson, Elizabeth Kathleen Neumann, Roland Nitschke, Shuichi Onami, Jaime A Pimentel, Anne L Plant, Andrea J Radtke, Bikash Sabata, Denis Schapiro, Johannes Schöneberg, Jeffrey M Spraggins, Damir Sudar, Wouter-Michiel Vierdag, Niels Volkmann, Carolina Wählby, Siyuan Steven Wang, Ziv Rafael Yaniv, Caterina Strambio-De-Castilla
Harmonizing the Generation and Pre-publication Stewardship of FAIR Image data. ArXiv (2024)
Derek J Le, Antonina Hafner, Sadhana Gaddam, Kevin C Wang, Alistair Nicol Boettiger
Super-enhancer interactomes from single cells link clustering and transcription. bioRxiv : the preprint server for biology (2024)
Tzu-Chiao Hung, David M Kingsley, Alistair Nicol Boettiger
Boundary stacking interactions enable cross-TAD enhancer-promoter communication during limb development. Nature genetics 56 (2) (2024)
Sedona Eve Murphy, Alistair Nicol Boettiger
Polycomb repression of Hox genes involves spatial feedback but not domain compaction or phase transition. Nature genetics (2024)
Christina L Jensen, Liang-Fu Chen, Tomek Swigut, Olivia J Crocker, David Yao, Mike C Bassik, James E Ferrell, Alistair Nicol Boettiger, Joanna Wysocka
Long range regulation of transcription scales with genomic distance in a gene specific manner. bioRxiv : the preprint server for biology (2024)
Tzu-Chiao Hung, David M Kingsley, Alistair Nicol Boettiger
Boundary stacking interactions enable cross-TAD enhancer-promoter communication during limb development. Nature genetics 56 (2) (2024)
Sedona Eve Murphy, Alistair Nicol Boettiger
Polycomb repression of Hox genes involves spatial feedback but not domain compaction or phase transition. Nature genetics 56 (3) (2024)
Sedona Eve Murphy, Alistair Nicol Boettiger
Polycomb repression of Hox genes involves spatial feedback but not domain compaction or phase transition. Nature genetics 56 (3) (2024)
Taihei Fujimori, Carolina Rios-Martinez, Abby R Thurm, Michaela M Hinks, Benjamin R Doughty, Joydeb Sinha, Derek Le, Antonina Hafner, William J Greenleaf, Alistair Nicol Boettiger, Lacramioara Bintu
Single-cell chromatin state transitions during epigenetic memory formation. bioRxiv : the preprint server for biology (2023)
Antonina Hafner, Alistair Nicol Boettiger
The spatial organization of transcriptional control. Nature reviews. Genetics (2022)
Jordan Yupeng Xiao, Antonina Hafner, Alistair Nicol Boettiger
How subtle changes in 3D structure can create large changes in transcription. eLife 10 (2021)
Aparna R Rajpurkar, Leslie J Mateo, Sedona E Murphy, Alistair Nicol Boettiger
Deep learning connects DNA traces to transcription to reveal predictive features beyond enhancer-promoter contact. Nature communications 12 (1) (2021)
Leslie J Mateo, Nasa Sinnott-Armstrong, Alistair Nicol Boettiger
Tracing DNA paths and RNA profiles in cultured cells and tissues with ORCA. Nature protocols 16 (3) (2021)
Bogdan Bintu, Leslie J Mateo, Jun-Han Su, Nicholas A Sinnott-Armstrong, Mirae Parker, Seon Kinrot, Kei Yamaya, Alistair Nicol Boettiger, Xiaowei Zhuang
Super-resolution chromatin tracing reveals domains and cooperative interactions in single cells. Science (New York, N.Y.) 362 (6413) (2018)

Alistair Nicol Boettiger.css-eqlu8i{font-size:small;padding-left:4px;} (Alistair N Boettiger, Alistair Boettiger)

Publication Activity (10 Years)

Top Topics

Top Venues

Alistair Nicol Boettiger (Alistair N Boettiger, Alistair Boettiger)