Daniel Raftery

ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 93

Top Venues

Analytical chemistry

Metabolites

Proceedings of the National Academy of Sciences of the United States of America

Metabolomics : Official journal of the Metabolomic Society

University of Washington

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Washington Jan 01 2012

United States

Professor :: Anesthesiology and Pain Medicine

Publications

Sandi L Navarro, Brian D Williamson, Ying Huang, G A Nagana Gowda, Daniel Raftery, Lesley F Tinker, Cheng Zheng, Shirley A A Beresford, Hayley Purcell, Danijel Djukovic, Haiwei Gu, Howard D Strickler, Fred K Tabung, Ross L Prentice, Marian L Neuhouser, Johanna W Lampe
Metabolite Predictors of Breast and Colorectal Cancer Risk in the Women's Health Initiative. Metabolites 14 (8) (2024)
Danni Liu, G A Nagana Gowda, Zhongli Jiang, Kangni Alemdjrodo, Min Zhang, Dabao Zhang, Daniel Raftery
Modeling blood metabolite homeostatic levels reduces sample heterogeneity across cohorts. Proceedings of the National Academy of Sciences of the United States of America 121 (8) (2024)
Goncalo Jorge Gouveia, Thomas Head, Leo L Cheng, Chaevien S Clendinen, John R Cort, Xiuxia Du, Arthur S Edison, Candace C Fleischer, Jeffrey C Hoch, Nathaniel D Mercaldo, Wimal Pathmasiri, Daniel Raftery, Tracey B Schock, Lloyd W Sumner, Panteleimon G Takis, Valerie Copie, Hamid R Eghbalnia, Robert Powers
Perspective: use and reuse of NMR-based metabolomics data: what works and what remains challenging. Metabolomics : Official journal of the Metabolomic Society 20 (2) (2024)
Sandi L Navarro, Brian D Williamson, Ying Huang, G A Nagana Gowda, Daniel Raftery, Lesley F Tinker, Cheng Zheng, Shirley A A Beresford, Hayley Purcell, Danijel Djukovic, Haiwei Gu, Howard D Strickler, Fred K Tabung, Ross L Prentice, Marian L Neuhouser, Johanna W Lampe
Metabolite Predictors of Breast and Colorectal Cancer Risk in the Women's Health Initiative. Metabolites 14 (8) (2024)
Danni Liu, G A Nagana Gowda, Zhongli Jiang, Kangni Alemdjrodo, Min Zhang, Dabao Zhang, Daniel Raftery
Modeling blood metabolite homeostatic levels reduces sample heterogeneity across cohorts. Proceedings of the National Academy of Sciences of the United States of America 121 (8) (2024)
Sandi L Navarro, Brian D Williamson, Ying Huang, G A Nagana Gowda, Daniel Raftery, Lesley F Tinker, Cheng Zheng, Shirley A A Beresford, Hayley Purcell, Danijel Djukovic, Haiwei Gu, Howard D Strickler, Fred K Tabung, Ross L Prentice, Marian L Neuhouser, Johanna W Lampe
Metabolite Predictors of Breast and Colorectal Cancer Risk in the Women's Health Initiative. Metabolites 14 (8) (2024)
Danni Liu, G A Nagana Gowda, Zhongli Jiang, Kangni Alemdjrodo, Min Zhang, Dabao Zhang, Daniel Raftery
Modeling blood metabolite homeostatic levels reduces sample heterogeneity across cohorts. Proceedings of the National Academy of Sciences of the United States of America 121 (8) (2024)
Danni Liu, G A Nagana Gowda, Zhongli Jiang, Kangni Alemdjrodo, Min Zhang, Dabao Zhang, Daniel Raftery
Modeling blood metabolite homeostatic levels reduces sample heterogeneity across cohorts. Proceedings of the National Academy of Sciences of the United States of America 121 (8) (2024)
David L Hubert, Kenneth R Arnold, Zachary G Greenspan, Anastasia Pupo, Ryan D Robinson, Valeria V Chavarin, Thomas B Barter, Danijel Djukovic, Daniel Raftery, Zer Vue, Antentor O Hinton, Melanie R McReynolds, Benjamin R Harrison, Mark A Phillips
Selection for early reproduction leads to accelerated aging and extensive metabolic remodeling in Drosophila melanogaster populations. bioRxiv : the preprint server for biology (2024)
Goncalo Jorge Gouveia, Thomas Head, Leo L Cheng, Chaevien S Clendinen, John R Cort, Xiuxia Du, Arthur S Edison, Candace C Fleischer, Jeffrey C Hoch, Nathaniel D Mercaldo, Wimal Pathmasiri, Daniel Raftery, Tracey B Schock, Lloyd W Sumner, Panteleimon G Takis, Valerie Copie, Hamid R Eghbalnia, Robert Powers
Perspective: use and reuse of NMR-based metabolomics data: what works and what remains challenging. Metabolomics : Official journal of the Metabolomic Society 20 (2) (2024)
Danni Liu, G A Nagana Gowda, Zhongli Jiang, Kangni Alemdjrodo, Min Zhang, Dabao Zhang, Daniel Raftery
Modeling blood metabolite homeostatic levels reduces sample heterogeneity across cohorts. Proceedings of the National Academy of Sciences of the United States of America 121 (8) (2024)
G A Nagana Gowda, Vadim Pascua, Lucas Hill, Danijel Djukovic, Dennis Wang, Daniel Raftery
Discovery of Hypoxanthine and Inosine as Robust Biomarkers for Predicting the Preanalytical Quality of Human Plasma and Serum for Metabolomics. Analytical chemistry (2024)
Goncalo Jorge Gouveia, Thomas Head, Leo L Cheng, Chaevien S Clendinen, John R Cort, Xiuxia Du, Arthur S Edison, Candace C Fleischer, Jeffrey C Hoch, Nathaniel D Mercaldo, Wimal Pathmasiri, Daniel Raftery, Tracey B Schock, Lloyd W Sumner, Panteleimon G Takis, Valerie Copie, Hamid R Eghbalnia, Robert Powers
Perspective: use and reuse of NMR-based metabolomics data: what works and what remains challenging. Metabolomics : Official journal of the Metabolomic Society 20 (2) (2024)
G A Nagana Gowda, Vadim Pascua, Camerin E Killion, Rajan K Paranji, Daniel Raftery
Labile Metabolite Profiling in Human Blood Using Phosphorus NMR Spectroscopy. Analytical chemistry (2023)
Fanjing Guo, Genjin Lin, Liheng Dong, Kian-Kai Cheng, Lingli Deng, Xiangnan Xu, Daniel Raftery, Ji-Yang Dong
Concordance-Based Batch Effect Correction for Large-Scale Metabolomics. Analytical chemistry 95 (18) (2023)
Georgios A Theodoridis, Helen G Gika, Daniel Raftery, Royston Goodacre, Robert S Plumb, Ian D Wilson
Ensuring Fact-Based Metabolite Identification in Liquid Chromatography-Mass Spectrometry-Based Metabolomics. Analytical chemistry 95 (8) (2023)
Tyler A U Hilsabeck, Vikram P Narayan, Kenneth A Wilson, Enrique Carrera, Daniel Raftery, Daniel E L Promislow, Rachel B Brem, Judith Campisi, Pankaj Kapahi
Machine Learning identifies conserved traits that influence lifespan and healthspan responses to dietary restriction. bioRxiv : the preprint server for biology (2023)
Fanjing Guo, Genjin Lin, Liheng Dong, Kian-Kai Cheng, Lingli Deng, Xiangnan Xu, Daniel Raftery, Ji-Yang Dong
Concordance-Based Batch Effect Correction for Large-Scale Metabolomics. Analytical chemistry 95 (18) (2023)
G A Nagana Gowda, Lauren Abell, Rong Tian, Daniel Raftery
Whole Body Distribution of Labile Coenzymes and Antioxidants in a Mouse Model as Visualized Using 1 H NMR Spectroscopy. Analytical chemistry (2023)
G A Nagana Gowda, Daniel Raftery
NMR Metabolomics Methods for Investigating Disease. Analytical chemistry 95 (1) (2023)
Angela J Hanson, William A Banks, Lisa F Bettcher, Robert Pepin, Daniel Raftery, Sandi L Navarro, Suzanne Craft
Cerebrospinal Fluid Metabolomics: Pilot Study of Using Metabolomics to Assess Diet and Metabolic Interventions in Alzheimer's Disease and Mild Cognitive Impairment. Metabolites 13 (4) (2023)
G A Nagana Gowda, Daniel Raftery
NMR Metabolomics Methods for Investigating Disease. Analytical chemistry 95 (1) (2023)
Angela J Hanson, William A Banks, Lisa F Bettcher, Robert Pepin, Daniel Raftery, Sandi L Navarro, Suzanne Craft
Cerebrospinal Fluid Metabolomics: Pilot Study of Using Metabolomics to Assess Diet and Metabolic Interventions in Alzheimer's Disease and Mild Cognitive Impairment. Metabolites 13 (4) (2023)
Sandi L Navarro, G A Nagana Gowda, Lisa F Bettcher, Robert Pepin, Natalie Nguyen, Mathew Ellenberger, Cheng Zheng, Lesley F Tinker, Ross L Prentice, Ying Huang, Tao Yang, Fred K Tabung, Queenie Chan, Ruey Leng Loo, Simin Liu, Jean Wactawski-Wende, Johanna W Lampe, Marian L Neuhouser, Daniel Raftery
Demographic, Health and Lifestyle Factors Associated with the Metabolome in Older Women. Metabolites 13 (4) (2023)
Fanjing Guo, Genjin Lin, Liheng Dong, Kian-Kai Cheng, Lingli Deng, Xiangnan Xu, Daniel Raftery, Ji-Yang Dong
Concordance-Based Batch Effect Correction for Large-Scale Metabolomics. Analytical chemistry 95 (18) (2023)
G A Nagana Gowda, Daniel Raftery
NMR Metabolomics Methods for Investigating Disease. Analytical chemistry 95 (1) (2023)
Fanjing Guo, Genjin Lin, Liheng Dong, Kian-Kai Cheng, Lingli Deng, Xiangnan Xu, Daniel Raftery, Ji-Yang Dong
Concordance-Based Batch Effect Correction for Large-Scale Metabolomics. Analytical chemistry (2023)
G A Nagana Gowda, Daniel Raftery
NMR Metabolomics Methods for Investigating Disease. Analytical chemistry 95 (1) (2023)
Sandi L Navarro, G A Nagana Gowda, Lisa F Bettcher, Robert Pepin, Natalie Nguyen, Mathew Ellenberger, Cheng Zheng, Lesley F Tinker, Ross L Prentice, Ying Huang, Tao Yang, Fred K Tabung, Queenie Chan, Ruey Leng Loo, Simin Liu, Jean Wactawski-Wende, Johanna W Lampe, Marian L Neuhouser, Daniel Raftery
Demographic, Health and Lifestyle Factors Associated with the Metabolome in Older Women. Metabolites 13 (4) (2023)
Sandi L Navarro, G A Nagana Gowda, Lisa F Bettcher, Robert Pepin, Natalie Nguyen, Mathew Ellenberger, Cheng Zheng, Lesley F Tinker, Ross L Prentice, Ying Huang, Tao Yang, Fred K Tabung, Queenie Chan, Ruey Leng Loo, Simin Liu, Jean Wactawski-Wende, Johanna W Lampe, Marian L Neuhouser, Daniel Raftery
Demographic, Health and Lifestyle Factors Associated with the Metabolome in Older Women. Metabolites 13 (4) (2023)
Georgios A Theodoridis, Helen G Gika, Daniel Raftery, Royston Goodacre, Robert S Plumb, Ian D Wilson
Ensuring Fact-Based Metabolite Identification in Liquid Chromatography-Mass Spectrometry-Based Metabolomics. Analytical chemistry 95 (8) (2023)
Sandi L Navarro, G A Nagana Gowda, Lisa F Bettcher, Robert Pepin, Natalie Nguyen, Mathew Ellenberger, Cheng Zheng, Lesley F Tinker, Ross L Prentice, Ying Huang, Tao Yang, Fred K Tabung, Queenie Chan, Ruey Leng Loo, Simin Liu, Jean Wactawski-Wende, Johanna W Lampe, Marian L Neuhouser, Daniel Raftery
Demographic, Health and Lifestyle Factors Associated with the Metabolome in Older Women. Metabolites 13 (4) (2023)
G A Nagana Gowda, Daniel Raftery
NMR Metabolomics Methods for Investigating Disease. Analytical chemistry 95 (1) (2023)
Georgios A Theodoridis, Helen G Gika, Daniel Raftery, Royston Goodacre, Robert S Plumb, Ian D Wilson
Ensuring Fact-Based Metabolite Identification in Liquid Chromatography-Mass Spectrometry-Based Metabolomics. Analytical chemistry (2023)
Sandi L Navarro, G A Nagana Gowda, Lisa F Bettcher, Robert Pepin, Natalie Nguyen, Mathew Ellenberger, Cheng Zheng, Lesley F Tinker, Ross L Prentice, Ying Huang, Tao Yang, Fred K Tabung, Queenie Chan, Ruey Leng Loo, Simin Liu, Jean Wactawski-Wende, Johanna W Lampe, Marian L Neuhouser, Daniel Raftery
Demographic, Health and Lifestyle Factors Associated with the Metabolome in Older Women. Metabolites 13 (4) (2023)
Donald D Nyangahu, Anna-Ursula Happel, Jerome Wendoh, Agano Kiravu, Yuli Wang, Colin Feng, Courtney R Plumlee, Sarah B Cohen, Bryan P Brown, Danijel Djukovic, Tariq Ganief, Melanie Gasper, Daniel Raftery, Jonathan Michael Blackburn, Nancy L Allbritton, Clive M Gray, Jisun Paik, Kevin B Urdahl, Heather B Jaspan
Bifidobacterium infantis associates with T cell immunity in human infants and is sufficient to enhance antigen-specific T cells in mice. Science advances 9 (49) (2023)
Yongpei Wang, Xingxing Liu, Liheng Dong, Kian-Kai Cheng, Caigui Lin, Xiaomin Wang, Ji-Yang Dong, Lingli Deng, Daniel Raftery
iMSEA: A Novel Metabolite Set Enrichment Analysis Strategy to Decipher Drug Interactions. Analytical chemistry (2023)
Georgios A Theodoridis, Helen G Gika, Daniel Raftery, Royston Goodacre, Robert S Plumb, Ian D Wilson
Ensuring Fact-Based Metabolite Identification in Liquid Chromatography-Mass Spectrometry-Based Metabolomics. Analytical chemistry 95 (8) (2023)
Georgios A Theodoridis, Helen G Gika, Daniel Raftery, Royston Goodacre, Robert S Plumb, Ian D Wilson
Ensuring Fact-Based Metabolite Identification in Liquid Chromatography-Mass Spectrometry-Based Metabolomics. Analytical chemistry 95 (8) (2023)
Matthew A Walker, Hongye Chen, Aprajita S Yadav, Julia Ritterhoff, Outi Villet, Timothy S McMillen, Yuliang Wang, Hayley Purcell, Danijel Djukovic, Daniel Raftery, Nina Isoherranen, Rong Tian
Stimulates Short-Chain Dehydrogenase/Reductase Proteins to Alleviate Heart Failure Independent of Mitochondrial Protein Deacetylation. Circulation (2023)
G A Nagana Gowda, Vadim Pascua, John A Lusk, Natalie N Hong, Lin Guo, Ji-Yang Dong, Ian R Sweet, Daniel Raftery
Monitoring live mitochondrial metabolism in real-time using NMR spectroscopy. Magnetic resonance in chemistry : MRC (2023)
G A Nagana Gowda, Daniel Raftery
NMR Metabolomics Methods for Investigating Disease. Analytical chemistry 95 (1) (2023)
Georgios A Theodoridis, Helen G Gika, Daniel Raftery, Royston Goodacre, Robert S Plumb, Ian D Wilson
Ensuring Fact-Based Metabolite Identification in Liquid Chromatography-Mass Spectrometry-Based Metabolomics. Analytical chemistry (2023)
Angela J Hanson, William A Banks, Lisa F Bettcher, Robert Pepin, Daniel Raftery, Sandi L Navarro, Suzanne Craft
Cerebrospinal Fluid Metabolomics: Pilot Study of Using Metabolomics to Assess Diet and Metabolic Interventions in Alzheimer's Disease and Mild Cognitive Impairment. Metabolites 13 (4) (2023)
Genjin Lin, Liheng Dong, Kian-Kai Cheng, Xiangnan Xu, Yongpei Wang, Lingli Deng, Daniel Raftery, Ji-Yang Dong
Differential Correlations Informed Metabolite Set Enrichment Analysis to Decipher Metabolic Heterogeneity of Disease. Analytical chemistry (2023)
G A Nagana Gowda, Vadim Pascua, John A Lusk, Natalie N Hong, Lin Guo, Ji-Yang Dong, Ian R Sweet, Daniel Raftery
Monitoring live mitochondrial metabolism in real-time using NMR spectroscopy. Magnetic resonance in chemistry : MRC (2023)
Georgios A Theodoridis, Helen G Gika, Daniel Raftery, Royston Goodacre, Robert S Plumb, Ian D Wilson
Ensuring Fact-Based Metabolite Identification in Liquid Chromatography-Mass Spectrometry-Based Metabolomics. Analytical chemistry 95 (8) (2023)
Angela J Hanson, William A Banks, Lisa F Bettcher, Robert Pepin, Daniel Raftery, Sandi L Navarro, Suzanne Craft
Cerebrospinal Fluid Metabolomics: Pilot Study of Using Metabolomics to Assess Diet and Metabolic Interventions in Alzheimer's Disease and Mild Cognitive Impairment. Metabolites 13 (4) (2023)
G A Nagana Gowda, Vadim Pascua, Daniel Raftery
Anomalous Dynamics of Labile Metabolites in Cold Human Blood Detected Using 1 H NMR Spectroscopy. Analytical chemistry (2023)
Ross L Prentice, Mary Pettinger, Marian L Neuhouser, Daniel Raftery, Cheng Zheng, G A Nagana Gowda, Ying Huang, Lesley F Tinker, Barbara V Howard, JoAnn E Manson, Robert Wallace, Yasmin Mossavar-Rahmani, Karen C Johnson, Johanna W Lampe
Biomarker-Calibrated Macronutrient Intake and Chronic Disease Risk among Postmenopausal Women. The Journal of nutrition 151 (8) (2022)
Fausto Carnevale Neto, Vadim Pascua, Daniel Raftery
Formation of sodium cluster ions complicates liquid chromatography-mass spectrometry metabolomics analyses. Rapid communications in mass spectrometry : RCM 35 (20) (2022)
Yongquan Xue, Trisha Shamp, G A Nagana Gowda, Michael Crabtree, Debasis Bagchi, Daniel Raftery
A Combination of Nicotinamide and D-Ribose (RiaGev) Is Safe and Effective to Increase NAD + Metabolome in Healthy Middle-Aged Adults: A Randomized, Triple-Blind, Placebo-Controlled, Cross-Over Pilot Clinical Trial. Nutrients 14 (11) (2022)
G A Nagana Gowda, Vadim Pascua, Fausto Carnevale Neto, Daniel Raftery
Hydrogen-Deuterium Addition and Exchange in N -Ethylmaleimide Reaction with Glutathione Detected by NMR Spectroscopy. ACS omega 7 (30) (2022)
Shweta Gupta, Arturo J Moreno, Dan Wang, Julio Leon, Chen Chen, Oliver Hahn, Yan Poon, Kenneth Greenberg, Nathaniel David, Tony Wyss-Coray, Daniel Raftery, Daniel E L Promislow, Dena B Dubal
KL1 Domain of Longevity Factor Klotho Mimics the Metabolome of Cognitive Stimulation and Enhances Cognition in Young and Aging Mice. The Journal of neuroscience : the official journal of the Society for Neuroscience 42 (19) (2022)
Vedangi Hambardikar, Mariona Guitart-Mampel, Ernest R Scoma, Pedro Urquiza, G A Nagana Gowda, Daniel Raftery, John A Collins, Maria E Solesio
Enzymatic Depletion of Mitochondrial Inorganic Polyphosphate (polyP) Increases the Generation of Reactive Oxygen Species (ROS) and the Activity of the Pentose Phosphate Pathway (PPP) in Mammalian Cells. Antioxidants (Basel, Switzerland) 11 (4) (2022)
Nathan Hwangbo, Xinyu Zhang, Daniel Raftery, Haiwei Gu, Shu-Ching Hu, Thomas J Montine, Joseph F Quinn, Kathryn A Chung, Amie L Hiller, Dongfang Wang, Qiang Fei, Lisa Bettcher, Cyrus P Zabetian, Elaine R Peskind, Ge Li, Daniel E L Promislow, Marie Y Davis, Alexander M Franks
Predictive Modeling of Alzheimer's and Parkinson's Disease Using Metabolomic and Lipidomic Profiles from Cerebrospinal Fluid. Metabolites 12 (4) (2022)
Ross L Prentice, Mary Pettinger, Cheng Zheng, Marian L Neuhouser, Daniel Raftery, G A Nagana Gowda, Ying Huang, Lesley F Tinker, Barbara V Howard, JoAnn E Manson, Linda V Van Horn, Robert Wallace, Yasmin Mossavar-Rahmani, Karen C Johnson, Linda Snetselaar, Johanna W Lampe
Biomarkers for Components of Dietary Protein and Carbohydrate with Application to Chronic Disease Risk in Postmenopausal Women. The Journal of nutrition 152 (4) (2022)
Cheng Zheng, Mary Pettinger, G A Nagana Gowda, Johanna W Lampe, Daniel Raftery, Lesley F Tinker, Ying Huang, Sandi L Navarro, Diane M O'Brien, Linda Snetselaar, Simin Liu, Robert B Wallace, Marian L Neuhouser, Ross L Prentice
Biomarker-Calibrated Red and Combined Red and Processed Meat Intakes with Chronic Disease Risk in a Cohort of Postmenopausal Women. The Journal of nutrition 152 (7) (2022)
G A Nagana Gowda, Natalie N Hong, Daniel Raftery
Evaluation of Fumaric Acid and Maleic Acid as Internal Standards for NMR Analysis of Protein Precipitated Plasma, Serum, and Whole Blood. Analytical chemistry 93 (6) (2021)
Lingli Deng, Lei Ma, Kian-Kai Cheng, Xiangnan Xu, Daniel Raftery, Ji-Yang Dong
Sparse PLS-Based Method for Overlapping Metabolite Set Enrichment Analysis. Journal of proteome research 20 (6) (2021)
Jingjing Xu, Yuanshan Wang, Xiangnan Xu, Kian-Kai Cheng, Daniel Raftery, Ji-Yang Dong
NMF-Based Approach for Missing Values Imputation of Mass Spectrometry Metabolomics Data. Molecules (Basel, Switzerland) 26 (19) (2021)
G A Nagana Gowda, Vadim Pascua, Daniel Raftery
Extending the Scope of 1H NMR-Based Blood Metabolomics for the Analysis of Labile Antioxidants: Reduced and Oxidized Glutathione. Analytical chemistry 93 (44) (2021)
Mohan Ghorasaini, Yassene Mohammed, Jerzy Adamski, Lisa Bettcher, John A Bowden, Matias Cabruja, Kevin Contrepois, Mathew Ellenberger, Bharat Gajera, Mark Haid, Daniel Hornburg, Christie Hunter, Christina M Jones, Theo Klein, Oleg A Mayboroda, Mina Mirzaian, Ruin Moaddel, Luigi Ferrucci, Jacqueline Lovett, Kenneth Nazir, Mackenzie Pearson, Baljit K Ubhi, Daniel Raftery, Fabien Riols, Rebekah Sayers, Eric J G Sijbrands, Michael P Snyder, Baolong Su, Vidya Velagapudi, Kevin J Williams, Yolanda B de Rijke, Martin A Giera
Cross-Laboratory Standardization of Preclinical Lipidomics Using Differential Mobility Spectrometry and Multiple Reaction Monitoring. Analytical chemistry (2021)
Fausto Carnevale Neto, Daniel Raftery
Expanding Urinary Metabolite Annotation through Integrated Mass Spectral Similarity Networking. Analytical chemistry 93 (35) (2021)
Baolong Su, Lisa F Bettcher, Wei-Yuan Hsieh, Daniel Hornburg, Mackenzie J Pearson, Niek Blomberg, Martin A Giera, Michael P Snyder, Daniel Raftery, Steven J Bensinger, Kevin J Williams
A DMS Shotgun Lipidomics Workflow Application to Facilitate High-Throughput, Comprehensive Lipidomics. Journal of the American Society for Mass Spectrometry 32 (11) (2021)
Patrick A Carroll, Brian W Freie, Pei Feng Cheng, Sivakanthan Kasinathan, Haiwei Gu, Theresa Hedrich, James A Dowdle, Vivek Venkataramani, Vijay Ramani, Xiaoying Wu, Daniel Raftery, Jay Shendure, Donald E Ayer, Charles H Muller, Robert N Eisenman
The glucose-sensing transcription factor MLX balances metabolism and stress to suppress apoptosis and maintain spermatogenesis. PLoS biology 19 (10) (2021)
Kathryn A Jewett, Ruth E Thomas, Chi Q Phan, Bernice C Lin, Gillian Milstein, Selina Yu, Lisa F Bettcher, Fausto Carnevale Neto, Danijel Djukovic, Daniel Raftery, Leo J Pallanck, Marie Y Davis
Glucocerebrosidase reduces the spread of protein aggregation in a Drosophila melanogaster model of neurodegeneration by regulating proteins trafficked by extracellular vesicles. PLoS genetics 17 (2) (2021)
Ross L Prentice, Barbara V Howard, Linda V Van Horn, Marian L Neuhouser, Garnet L Anderson, Lesley F Tinker, Johanna W Lampe, Daniel Raftery, Mary Pettinger, Aaron K Aragaki, Cynthia A Thomson, Yasmin Mossavar-Rahmani, Marcia L Stefanick, Jane A Cauley, Jacques E Rossouw, JoAnn E Manson, Rowan T Chlebowski
Nutritional epidemiology and the Women's Health Initiative: a review. The American journal of clinical nutrition 113 (5) (2021)
Nathan Hwangbo, Xinyu Zhang, Daniel Raftery, Haiwei Gu, Shu-Ching Hu, Thomas J Montine, Joseph F Quinn, Kathryn A Chung, Amie L Hiller, Dongfang Wang, Qiang Fei, Lisa Bettcher, Cyrus P Zabetian, Elaine Peskind, Gail Li, Daniel E L Promislow, Alexander M Franks
A metabolomic aging clock using human CSF. The journals of gerontology. Series A, Biological sciences and medical sciences (2021)
Sheng Pan, Meredith A J Hullar, Lisa A Lai, Hong Peng, Damon H May, William S Noble, Daniel Raftery, Sandi L Navarro, Marian L Neuhouser, Paul D Lampe, Johanna W Lampe, Ru Chen
Gut Microbial Protein Expression in Response to Dietary Patterns in a Controlled Feeding Study: A Metaproteomic Approach. Microorganisms 8 (3) (2020)
Xinyu Zhang, Ji-Yang Dong, Daniel Raftery
Five Easy Metrics of Data Quality for LC-MS-Based Global Metabolomics. Analytical chemistry 92 (19) (2020)
Lingli Deng, Fanjing Guo, Kian-Kai Cheng, Jiangjiang Zhu, Haiwei Gu, Daniel Raftery, Ji-Yang Dong
Identifying Significant Metabolic Pathways Using Multi-Block Partial Least-Squares Analysis. Journal of proteome research 19 (5) (2020)
Sandi L Navarro, Lisa Levy, Keith R Curtis, Isaac Elkon, Orsalem J Kahsai, Hamza S Ammar, Timothy W Randolph, Natalie N Hong, Fausto Carnevale Neto, Daniel Raftery, Robert S Chapkin, Johanna W Lampe, Meredith A J Hullar
Effect of a Flaxseed Lignan Intervention on Circulating Bile Acids in a Placebo-Controlled Randomized, Crossover Trial. Nutrients 12 (6) (2020)
George N Ioannou, G A Nagana Gowda, Danijel Djukovic, Daniel Raftery
Distinguishing NASH Histological Severity Using a Multiplatform Metabolomics Approach. Metabolites 10 (4) (2020)
Kelly Jin, Kenneth A Wilson, Jennifer N Beck, Christopher S Nelson, George W Brownridge, Benjamin R Harrison, Danijel Djukovic, Daniel Raftery, Rachel B Brem, Shiqing Yu, Mathias Drton, Ali Shojaie, Pankaj Kapahi, Daniel E L Promislow
Genetic and metabolomic architecture of variation in diet restriction-mediated lifespan extension in Drosophila. PLoS genetics 16 (7) (2020)
Jason W Miklas, Elisa C Clark, Shiri Levy, Damien Detraux, Andrea Leonard, Kevin Beussman, Megan R Showalter, Alec T Smith, Peter Hofsteen, Xiulan Yang, Jesse Macadangdang, Tuula Manninen, Daniel Raftery, Anup Madan, Anu Suomalainen, Deok-Ho Kim, Charles E Murry, Oliver Fiehn, Nathan J Sniadecki, Yuliang Wang, Hannele Ruohola-Baker
Author Correction: TFPa/HADHA is required for fatty acid beta-oxidation and cardiolipin re-modeling in human cardiomyocytes. Nature communications 11 (1) (2020)
Jason W Miklas, Elisa C Clark, Shiri Levy, Damien Detraux, Andrea Leonard, Kevin Beussman, Megan R Showalter, Alec T Smith, Peter Hofsteen, Xiulan Yang, Jesse Macadangdang, Tuula Manninen, Daniel Raftery, Anup Madan, Anu Suomalainen, Deok-Ho Kim, Charles E Murry, Oliver Fiehn, Nathan J Sniadecki, Yuliang Wang, Hannele Ruohola-Baker
TFPa/HADHA is required for fatty acid beta-oxidation and cardiolipin re-modeling in human cardiomyocytes. Nature communications 10 (1) (2019)
Daniel W Bearden, David A Sheen, Yamil Simón-Manso, Bruce A Benner, Werickson F C Rocha, Niksa Blonder, Katrice A Lippa, Richard D Beger, Laura K Schnackenberg, Jinchun Sun, Khyati Y Mehta, Amrita K Cheema, Haiwei Gu, Ramesh Marupaka, G A Nagana Gowda, Daniel Raftery
Metabolomics Test Materials for Quality Control: A Study of a Urine Materials Suite. Metabolites 9 (11) (2019)
Alan Cesar Pilon, Haiwei Gu, Daniel Raftery, Vanderlan da Silva Bolzani, Norberto Peporine Lopes, Ian Castro-Gamboa, Fausto Carnevale Neto
Mass Spectral Similarity Networking and Gas-Phase Fragmentation Reactions in the Structural Analysis of Flavonoid Glycoconjugates. Analytical chemistry 91 (16) (2019)
Carly B Garrison, Yuzheng Zhang, Sandi L Navarro, Timothy W Randolph, Meredith A J Hullar, Mario Kratz, Marian L Neuhouser, Daniel Raftery, Paul D Lampe, Johanna W Lampe
Proteomic Analysis of Plasma Reveals Fat Mass Influences Cancer-Related Pathways in Healthy Humans Fed Controlled Diets Differing in Glycemic Load. Cancer prevention research (Philadelphia, Pa.) 12 (9) (2019)
Fausto Carnevale Neto, Márcio Adriano Andréo, Daniel Raftery, João Luis Callegari Lopes, Norberto Peporine Lopes, Ian Castro-Gamboa, Beatriz Helena L N Sales Maia, Emmanoel Vilaça Costa, Ricardo Vessecchi
Characterization of aporphine alkaloids by electrospray ionization tandem mass spectrometry and density functional theory calculations. Rapid communications in mass spectrometry : RCM (2019)
Alan Cesar Pilon, Haiwei Gu, Daniel Raftery, Vanderlan da Silva Bolzani, Norberto Peporine Lopes, Ian Castro-Gamboa, Fausto Carnevale Neto
Correction to Mass Spectral Similarity Networking and Gas-Phase Fragmentation Reactions in the Structural Analysis of Flavonoid Glycoconjugates. Analytical chemistry 91 (22) (2019)
Qiang Fei, Dongfang Wang, Paniz Jasbi, Ping Zhang, G A Nagana Gowda, Daniel Raftery, Haiwei Gu
Combining NMR and MS with Chemical Derivatization for Absolute Quantification with Reduced Matrix Effects. Analytical chemistry 91 (6) (2019)
Liladhar Paudel, G A Nagana Gowda, Daniel Raftery
Extractive Ratio Analysis NMR Spectroscopy for Metabolite Identification in Complex Biological Mixtures. Analytical chemistry 91 (11) (2019)
Abdul-Hamid M Emwas, Raja Roy, Ryan T McKay, Leonardo Tenori, Edoardo Saccenti, G A Nagana Gowda, Daniel Raftery, Fatimah Alahmari, Lukasz Jaremko, Mariusz Jaremko, David Scott Wishart
NMR Spectroscopy for Metabolomics Research. Metabolites 9 (7) (2019)
Dan Shao, Outi Villet, Zhen Zhang, Sung Won Choi, Jie Yan, Julia Ritterhoff, Haiwei Gu, Danijel Djukovic, Danos Christodoulou, Stephen C Kolwicz, Daniel Raftery, Rong Tian
Glucose promotes cell growth by suppressing branched-chain amino acid degradation. Nature communications 9 (1) (2018)
Karis A Ederer, Kelly Jin, Sarah Bouslog, Lu Wang, Gregory S Gorman, Glenn C Rowe, Peter Abadir, Daniel Raftery, Douglas R Moellering, Daniel Promislow, Patricia Jumbo-Lucioni, Maria De Luca
Age- and Genotype-Specific Effects of the Angiotensin-Converting Enzyme Inhibitor Lisinopril on Mitochondrial and Metabolic Parameters in Drosophila melanogaster. International journal of molecular sciences 19 (11) (2018)
Rong You, Jin Dai, Ping Zhang, Gregory A Barding, Daniel Raftery
Dynamic Metabolic Response to Adriamycin-Induced Senescence in Breast Cancer Cells. Metabolites 8 (4) (2018)
Dan Du, Haiwei Gu, Danijel Djukovic, Lisa Bettcher, Meng Gong, Wen Zheng, Liqiang Hu, Xinyu Zhang, Renke Zhang, Dongfang Wang, Daniel Raftery
Multiplatform Metabolomics Investigation of Antiadipogenic Effects on 3T3-L1 Adipocytes by a Potent Diarylheptanoid. Journal of proteome research 17 (6) (2018)
Fariba Tayyari, G A Nagana Gowda, Haiwei Gu, Daniel Raftery
Correction to "15N-Cholamine-A Smart Isotope Tag for Combining NMR- and MS-Based Metabolite Profiling". Analytical chemistry 91 (1) (2018)
G A Nagana Gowda, Danijel Djukovic, Lisa Fan Bettcher, Haiwei Gu, Daniel Raftery
NMR-Guided Mass Spectrometry for Absolute Quantitation of Human Blood Metabolites. Analytical chemistry 90 (3) (2018)
Chen Chen, G A Nagana Gowda, Jiangjiang Zhu, Lingli Deng, Haiwei Gu, E Gabriela Chiorean, Mohammad Abu Zaid, Marietta Harrison, Dabao Zhang, Min Zhang, Daniel Raftery
Altered metabolite levels and correlations in patients with colorectal cancer and polyps detected using seemingly unrelated regression analysis. Metabolomics : Official journal of the Metabolomic Society 13 (11) (2017)
Haiwei Gu, Patrick A Carroll, Jianhai Du, Jiangjiang Zhu, Fausto Carnevale Neto, Robert N Eisenman, Daniel Raftery
Quantitative Method to Investigate the Balance between Metabolism and Proteome Biomass: Starting from Glycine. Angewandte Chemie (International ed. in English) 55 (50) (2016)

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Daniel Raftery