David A Rasko (Dave A Rasko, D A Rasko)

Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 60

Top Topics

Escherichia Coli

Staphylococcus Aureus

Intensive Care Unit

Cystic Fibrosis

Top Venues

Microbiology resource announcements

PLoS neglected tropical diseases

This page only lists publications with an associated author ORCID identifier.

Publications

John S A Mattick, Robin E Bromley, Kaylee J Watson, Ricky S Adkins, Christopher I Holt, Jarrett F Lebov, Benjamin C Sparklin, Tyonna S Tyson, David A Rasko, Julie C Dunning Hotopp
Deciphering Bacterial and Archaeal Transcriptional Dark Matter and Its Architectural Complexity. bioRxiv : the preprint server for biology (2024)
Timileyin Y Adediran, Gwen L Robinson, J Kristie Johnson, Yuanyuan Liang, Sarah Bejo, Surbhi Leekha, David A Rasko, O Colin Stine, Anthony D Harris, Kerri A Thom
Factors associated with patient-to-healthcare personnel (HCP) and HCP-to-subsequent patient transmission of methicillin-resistant Staphylococcus aureus . Infection control and hospital epidemiology (2024)
Timileyin Y Adediran, Gwen L Robinson, J Kristie Johnson, Yuanyuan Liang, Sarah Bejo, Surbhi Leekha, David A Rasko, O Colin Stine, Anthony D Harris, Kerri A Thom
Factors associated with patient-to-healthcare personnel (HCP) and HCP-to-subsequent patient transmission of methicillin-resistant Staphylococcus aureus . Infection control and hospital epidemiology 45 (5) (2024)
Timileyin Y Adediran, Gwen L Robinson, J Kristie Johnson, Yuanyuan Liang, Sarah Bejo, Surbhi Leekha, David A Rasko, O Colin Stine, Anthony D Harris, Kerri A Thom
Factors associated with patient-to-healthcare personnel (HCP) and HCP-to-subsequent patient transmission of methicillin-resistant Staphylococcus aureus . Infection control and hospital epidemiology 45 (5) (2024)
John S A Mattick, Robin E Bromley, Kaylee J Watson, Ricky S Adkins, Christopher I Holt, Jarrett F Lebov, Benjamin C Sparklin, Tyonna S Tyson, David A Rasko, Julie C Dunning Hotopp
Deciphering Bacterial and Archaeal Transcriptional Dark Matter and Its Architectural Complexity. bioRxiv : the preprint server for biology (2024)
John S A Mattick, Robin E Bromley, Kaylee J Watson, Ricky S Adkins, Christopher I Holt, Jarrett F Lebov, Benjamin C Sparklin, Tyonna S Tyson, David A Rasko, Julie C Dunning Hotopp
Deciphering transcript architectural complexity in bacteria and archaea. mBio (2024)
Casey E Hofstaedter, Courtney E Chandler, Charles M Met, Joseph J Gillespie, Janette M Harro, David R Goodlett, David A Rasko, Robert K Ernst
Divergent Pseudomonas aeruginosa LpxO enzymes perform site-specific lipid A 2-hydroxylation. mBio 15 (2) (2023)
Casey E Hofstaedter, Courtney E Chandler, Charles M Met, Joseph J Gillespie, Janette M Harro, David R Goodlett, David A Rasko, Robert K Ernst
Divergent Pseudomonas aeruginosa LpxO enzymes perform site-specific lipid A 2-hydroxylation. mBio 15 (2) (2023)
Courtney E Chandler, Casey E Hofstaedter, Tracy H Hazen, David A Rasko, Robert K Ernst
Genomic and Functional Characterization of Longitudinal Pseudomonas aeruginosa Isolates from Young Patients with Cystic Fibrosis. Microbiology spectrum (2023)
Tracy H Hazen, Timileyin Adediran, Stephanie Hitchcock, Lyndsay M O'Hara, Lisa Pineles, Jane M Michalski, J Kristie Johnson, M Hong Nguyen, David P Calfee, Loren G Miller, Anthony D Harris, David A Rasko
Clinical and Bacterial Characteristics Associated with Glove and Gown Contamination by Carbapenem-Resistant Klebsiella pneumoniae in the Health Care Setting. Microbiology spectrum (2023)
Caitlin E Gabor, Tracy H Hazen, BreOnna C Delaine-Elias, David A Rasko, Eileen M Barry
Genomic, transcriptomic, and phenotypic differences among archetype Shigella flexneri strains of serotypes 2a, 3a, and 6. mSphere (2023)
Casey E Hofstaedter, Courtney E Chandler, Charles M Met, Joseph J Gillespie, Janette M Harro, David R Goodlett, David A Rasko, Robert K Ernst
Divergent Pseudomonas aeruginosa LpxO enzymes perform site-specific lipid A 2-hydroxylation. mBio 15 (2) (2023)
Casey E Hofstaedter, Courtney E Chandler, Charles M Met, Joseph J Gillespie, Janette M Harro, David R Goodlett, David A Rasko, Robert K Ernst
Divergent Pseudomonas aeruginosa LpxO enzymes perform site-specific lipid A 2-hydroxylation. mBio (2023)
Waleska Saitz, David A Montero, Mirka Pardo, Daniela Araya, Marjorie De la Fuente, Marcela A Hermoso, Mauricio J Farfán, Daniel Ginard, Ramon Rosselló-Móra, David A Rasko, Felipe Del Canto, Roberto M Vidal
Characterization of Adherent-Invasive Escherichia coli (AIEC) Outer Membrane Proteins Provides Potential Molecular Markers to Screen Putative AIEC Strains. International journal of molecular sciences 23 (16) (2022)
Timileyin Adediran, Stephanie Hitchcock, Lyndsay M O'Hara, Jane M Michalski, J Kristie Johnson, David P Calfee, Loren G Miller, Tracy H Hazen, Anthony D Harris, David A Rasko
Erratum for Adediran et al., "Examination of Staphylococcus aureus Isolates from the Gloves and Gowns of Intensive Care Unit Health Care Workers". Microbiology resource announcements 11 (9) (2022)
Victoria I Verhoeve, Jerod A Brammer, Timothy P Driscoll, Adrienne R Kambouris, David A Rasko, Alan S Cross, Joseph J Gillespie
Genome sequencing of Pseudomonas aeruginosa strain M2 illuminates traits of an opportunistic pathogen of burn wounds. G3 (Bethesda, Md.) 12 (5) (2022)
Michael J Sikorski, Jianguo Ma, Tracy H Hazen, Sachin N Desai, Siaosi Tupua, Susana Nimarota-Brown, Michelle Sialeipata, Savitra Rambocus, Susan A Ballard, Mary Valcanis, Robert E Thomsen, Roy M Robins-Browne, Benjamin P Howden, Take K Naseri, Myron M Levine, David A Rasko
Spatial-temporal and phylogenetic analyses of epidemiologic data to help understand the modes of transmission of endemic typhoid fever in Samoa. PLoS neglected tropical diseases 16 (10) (2022)
Rebecca J Bengtsson, Adam J Simpkin, Caisey V Pulford, Ross Low, David A Rasko, Daniel J Rigden, Neil Hall, Eileen M Barry, Sharon M Tennant, Kate S Baker
Pathogenomic analyses of Shigella isolates inform factors limiting shigellosis prevention and control across LMICs. Nature microbiology 7 (2) (2022)
Michael J Sikorski, Tracy H Hazen, Sachin N Desai, Susana Nimarota-Brown, Siaosi Tupua, Michelle Sialeipata, Savitra Rambocus, Danielle N Ingle, Sebastian Duchene, Susan A Ballard, Mary Valcanis, Sara Zufan, Jianguo Ma, Jason W Sahl, Mailis Maes, Gordon Dougan, Robert E Thomsen, Roy M Robins-Browne, Benjamin P Howden, Take K Naseri, Myron M Levine, David A Rasko
Persistence of Rare Salmonella Typhi Genotypes Susceptible to First-Line Antibiotics in the Remote Islands of Samoa. mBio 13 (5) (2022)
Timileyin Adediran, Stephanie Hitchcock, Lyndsay M O'Hara, Jane M Michalski, J Kristie Johnson, David P Calfee, Loren G Miller, Tracy H Hazen, David A Rasko, Anthony D Harris
Erratum for Adediran et al., "Examination of 388 Staphylococcus aureus Isolates from Intensive Care Unit Patients". Microbiology resource announcements 11 (9) (2022)
Timileyin Adedrian, Stephanie Hitchcock, Lyndsay M O'Hara, Jane M Michalski, J Kristie Johnson, David P Calfee, Loren G Miller, Tracy H Hazen, Anthony D Harris, David A Rasko
Comparative Genomics Identifies Features Associated with Methicillin-Resistant Staphylococcus aureus (MRSA) Transmission in Hospital Settings. mSphere 7 (3) (2022)
Timileyin Y Adediran, Stephanie Hitchcock, J Kristie Johnson, Oscar Colin Stine, Surbhi Leekha, Kerri A Thom, Yuanyuan Liang, David A Rasko, Anthony D Harris
Molecular concordance of methicillin-resistant Staphylococcus aureus isolates from healthcare workers and patients. Infection control and hospital epidemiology (2022)
Esther Ndungo, Johanna B Holm, Syze Gama, Andrea G Buchwald, Sharon M Tennant, Miriam K Laufer, Marcela F Pasetti, David A Rasko
Dynamics of the Gut Microbiome in Shigella -Infected Children during the First Two Years of Life. mSystems 7 (5) (2022)
Timileyin Adediran, Stephanie Hitchcock, Lyndsay M O'Hara, Jane M Michalski, J Kristie Johnson, David P Calfee, Loren G Miller, Tracy H Hazen, Anthony D Harris, David A Rasko
Erratum for Adediran et al., "Comparative Genomics Identifies Features Associated with Methicillin-Resistant Staphylococcus aureus (MRSA) Transmission in Hospital Settings". mSphere 7 (5) (2022)
Victoria E Watson, Tracy H Hazen, David A Rasko, Megan E Jacob, Johanna R Elfenbein, Stephen H Stauffer, Jody L Gookin
Comparative Genomics of Atypical Enteropathogenic Escherichia coli from Kittens and Children Identifies Bacterial Factors Associated with Virulence in Kittens. Infection and immunity 89 (3) (2021)
F Matthew Kuhlmann, R O Laine, S Afrin, Rie Nakajima, M Akhtar, T Vickers, K Parker, N N Nizam, V Grigura, C W Goss, P L Felgner, David A Rasko, Firdausi Qadri, James M Fleckenstein
Contribution of Noncanonical Antigens to Virulence and Adaptive Immunity in Human Infection with Enterotoxigenic E. coli. Infection and immunity 89 (5) (2021)
Matthew Chung, Vincent M Bruno, David A Rasko, Christina A Cuomo, Jose F Muñoz, Jonathan Livny, Amol Carl Shetty, Anup Mahurkar, Julie C Dunning Hotopp
Best practices on the differential expression analysis of multi-species RNA-seq. Genome biology 22 (1) (2021)
Matthew Chung, Ricky S Adkins, John S A Mattick, Katie R Bradwell, Amol C Shetty, Lisa Sadzewicz, Luke J Tallon, Claire M Fraser, David A Rasko, Anup Mahurkar, Julie C Dunning Hotopp
FADU: a Quantification Tool for Prokaryotic Transcriptomic Analyses. mSystems 6 (1) (2021)
Julie C Dunning Hotopp, David A Baltrus, Vincent M Bruno, John J Dennehy, Steven R Gill, Julia A Maresca, Jelle Matthijnssens, Irene L G Newton, Catherine Putonti, David A Rasko, Antonis Rokas, Simon Roux, Jason E Stajich, Kenneth M Stedman, Frank J Stewart, J Cameron Thrash
Best Practices for Successfully Writing and Publishing a Genome Announcement in Microbiology Resource Announcements. Microbiology resource announcements 9 (36) (2020)
Nadia Boisen, Mark T Østerlund, Katrine G Joensen, Araceli E Santiago, Inacio Mandomando, Alejandro Cravioto, Marie A Chattaway, Laura A Gonyar, Søren Overballe-Petersen, Oscar Colin Stine, David A Rasko, Flemming Scheutz, James P Nataro
Redefining enteroaggregative Escherichia coli (EAEC): Genomic characterization of epidemiological EAEC strains. PLoS neglected tropical diseases 14 (9) (2020)
Tracy H Hazen, Husain Poonawala, Kapil K Saharia, Michael S Donnenberg, David A Rasko
Draft Genome Sequence of Escherichia coli Strain UMD142. Microbiology resource announcements 9 (45) (2020)
Tracy H Hazen, J Kristie Johnson, Anthony D Harris, David A Rasko
Genome Sequencing of Escherichia coli and Klebsiella pneumoniae Isolates That Harbor the FOX-5 β-Lactamase Gene. Microbiology resource announcements 9 (45) (2020)
Riley G Risteen, Tracy H Hazen, Jane M Michalski, Frédéric Poly, Sharon M Tennant, David A Rasko
Examination of 189 Campylobacter Species Isolates from the Global Enteric Multicenter Study. Microbiology resource announcements 9 (30) (2020)
Timileyin Adedrian, Stephanie Hitchcock, Lyndsay M O'Hara, Jane M Michalski, J Kristie Johnson, David P Calfee, Loren G Miller, Tracy H Hazen, Anthony D Harris, David A Rasko
Examination of Staphylococcus aureus Isolates from the Gloves and Gowns of Intensive Care Unit Health Care Workers. Microbiology resource announcements 9 (32) (2020)
Vincent T Lee, Reza Ghodssi, Najib El Sayed, Rena D Malik, Olga G Goloubeva, Tracy H Hazen, David A Rasko
Draft Genome Sequence of Pseudomonas aeruginosa Strain PA14-UM. Microbiology resource announcements 9 (46) (2020)
Rodrigo T Hernandes, Tracy H Hazen, Luís F Dos Santos, Taylor K S Richter, Jane M Michalski, David A Rasko
Comparative genomic analysis provides insight into the phylogeny and virulence of atypical enteropathogenic Escherichia coli strains from Brazil. PLoS neglected tropical diseases 14 (6) (2020)
Michael J Sikorski, Tracy H Hazen, Gopi Vyas, Jane M Michalski, David A Rasko
Genome Sequences of Four Shigella boydii Strains Representative of the Major S. boydii Clades. Microbiology resource announcements 9 (41) (2020)
Tracy H Hazen, Stephanie Hitchcock, Lyndsay M O'Hara, Jane M Michalski, J Kristie Johnson, David P Calfee, Loren G Miller, Anthony D Harris, David A Rasko
Draft Genome Sequences of Five Diverse Klebsiella Species Isolates from Intensive Care Unit Patients. Microbiology resource announcements 9 (47) (2020)
Courtney E Chandler, Alexander M Horspool, Preston J Hill, Daniel J Wozniak, Jeffrey W Schertzer, David A Rasko, Robert K Ernst
Genomic and Phenotypic Diversity among Ten Laboratory Isolates of Pseudomonas aeruginosa PAO1. Journal of bacteriology 201 (5) (2019)
Tracy H Hazen, David A Rasko
The Complete Genome of the Atypical Enteropathogenic Escherichia coli Archetype Isolate E110019 Highlights a Role for Plasmids in Dissemination of the Type III Secreted Effector EspT. Infection and immunity 87 (10) (2019)
F Matthew Kuhlmann, John Martin, Tracy H Hazen, Tim J Vickers, Madeline Pashos, Pablo C Okhuysen, Oscar G Gómez-Duarte, Elizabeth Cebelinski, Dave Boxrud, Felipe Del Canto, Roberto Vidal, Firdausi Qadri, Makedonka Mitreva, David A Rasko, James M Fleckenstein
Conservation and global distribution of non-canonical antigens in Enterotoxigenic Escherichia coli. PLoS neglected tropical diseases 13 (11) (2019)
David A Baltrus, Christina A Cuomo, John J Dennehy, Julie C Dunning Hotopp, Julia A Maresca, Irene L G Newton, David A Rasko, Antonis Rokas, Simon Roux, Jason E Stajich
Future-Proofing Your Microbiology Resource Announcements Genome Assembly for Reproducibility and Clarity. Microbiology resource announcements 8 (36) (2019)
Timileyin Adedrian, Stephanie Hitchcock, Lyndsay M O'Hara, Jane M Michalski, J Kristie Johnson, David P Calfee, Loren G Miller, Tracy H Hazen, David A Rasko, Anthony D Harris
Examination of 388 Staphylococcus aureus Isolates from Intensive Care Unit Patients. Microbiology resource announcements 8 (46) (2019)
Tracy H Hazen, Sushma Nagaraj, Sunil Sen, Jasnehta Permala-Booth, Felipe Del Canto, Roberto Vidal, Eileen M Barry, Jacob P Bitoun, Wilbur H Chen, Sharon M Tennant, David A Rasko
Genome and Functional Characterization of Colonization Factor Antigen I- and CS6-Encoding Heat-Stable Enterotoxin-Only Enterotoxigenic Escherichia coli Reveals Lineage and Geographic Variation. mSystems 4 (1) (2019)
Kristin Bornstein, Sharon M Tennant, Tracy H Hazen, John D Sorkin, Milagritos D Tapia, Samba O Sow, Uma Onwuchekwa, Myron M Levine, David A Rasko
Genetic changes associated with the temporal shift in invasive non-typhoidal Salmonella serovars in Bamako Mali. PLoS neglected tropical diseases 13 (6) (2019)
Rachael B Chanin, Kourtney P Nickerson, Alejandro Llanos-Chea, Jeticia R Sistrunk, David A Rasko, Deepak Kumar Vijaya Kumar, John de la Parra, Jared R Auclair, Jessica Ding, Kelvin Li, Snaha Krishna Dogiparthi, Benjamin J D Kusber, Christina S Faherty
Shigella flexneri Adherence Factor Expression in In Vivo-Like Conditions. mSphere 4 (6) (2019)
Roberto M Vidal, Khitam Muhsen, Sharon M Tennant, Ann-Mari Svennerholm, Samba O Sow, Dipika Sur, Anita K M Zaidi, Abu S G Faruque, Debasish Saha, Richard Adegbola, M Jahangir Hossain, Pedro L Alonso, Robert F Breiman, Quique Bassat, Boubou Tamboura, Doh Sanogo, Uma Onwuchekwa, Byomkesh Manna, Thandavarayan Ramamurthy, Suman Kanungo, Shahnawaz Ahmed, Shahida Qureshi, Farheen Quadri, Anowar Hossain, Sumon K Das, Martin Antonio, Inacio Mandomando, Tacilta Nhampossa, Sozinho Acácio, Richard Omore, John B Ochieng, Joseph O Oundo, Eric D Mintz, Ciara E O'Reilly, Lynette Y Berkeley, Sofie Livio, Sandra Panchalingam, Dilruba Nasrin, Tamer H Farag, Yukun Wu, Halvor Sommerfelt, Roy M Robins-Browne, Felipe Del Canto, Tracy H Hazen, David A Rasko, Karen L Kotloff, James P Nataro, Myron M Levine
Colonization factors among enterotoxigenic Escherichia coli isolates from children with moderate-to-severe diarrhea and from matched controls in the Global Enteric Multicenter Study (GEMS). PLoS neglected tropical diseases 13 (1) (2019)
David A Rasko, Felipe Del Canto, Qingwei Luo, James M Fleckenstein, Roberto Vidal, Tracy H Hazen
Comparative genomic analysis and molecular examination of the diversity of enterotoxigenic Escherichia coli isolates from Chile. PLoS neglected tropical diseases 13 (11) (2019)
Matthew Chung, Laura Teigen, Hong Liu, Silvia Libro, Amol Shetty, Nikhil Kumar, Xuechu Zhao, Robin E Bromley, Luke J Tallon, Lisa Sadzewicz, Claire M Fraser, David A Rasko, Scott G Filler, Jeremy M Foster, Michelle L Michalski, Vincent M Bruno, Julie C Dunning Hotopp
Targeted enrichment outperforms other enrichment techniques and enables more multi-species RNA-Seq analyses. Scientific reports 8 (1) (2018)
Ellen E Higginson, Girish Ramachandran, Tracy H Hazen, Dane A Kania, David A Rasko, Marcela F Pasetti, Myron M Levine, Sharon M Tennant
Improving Our Understanding of Salmonella enterica Serovar Paratyphi B through the Engineering and Testing of a Live Attenuated Vaccine Strain. mSphere 3 (6) (2018)
Taylor K S Richter, Jane M Michalski, Luke Zanetti, Sharon M Tennant, Wilbur H Chen, David A Rasko
Responses of the Human Gut Escherichia coli Population to Pathogen and Antibiotic Disturbances. mSystems 3 (4) (2018)
Tracy H Hazen, Roberta T Mettus, Christi L McElheny, Sarah L Bowler, Yohei Doi, David A Rasko
Draft Genome Sequences of blaKPC-Containing Enterobacter aerogenes, Citrobacter freundii, and Citrobacter koseri Strains. Genome announcements 6 (8) (2018)
Tracy H Hazen, Roberta Mettus, Christi L McElheny, Sarah L Bowler, Sushma Nagaraj, Yohei Doi, David A Rasko
Diversity among blaKPC-containing plasmids in Escherichia coli and other bacterial species isolated from the same patients. Scientific reports 8 (1) (2018)
Taylor K S Richter, Tracy H Hazen, Diana Lam, Christian L Coles, Jessica C Seidman, Yaqi You, Ellen K Silbergeld, Claire M Fraser, David A Rasko
Temporal Variability of Escherichia coli Diversity in the Gastrointestinal Tracts of Tanzanian Children with and without Exposure to Antibiotics. mSphere 3 (6) (2018)
Colin D Robertson, Tracy H Hazen, James B Kaper, David A Rasko, Anne-Marie Hansen
Phosphotyrosine-Mediated Regulation of Enterohemorrhagic Escherichia coli Virulence. mBio 9 (1) (2018)
Esther Ndungo, Arlo Randall, Tracy H Hazen, Dane A Kania, Krista Trappl-Kimmons, Xiaowu Liang, Eileen M Barry, Karen L Kotloff, Subhra Chakraborty, Sachin Mani, David A Rasko, Marcela F Pasetti
A Novel Shigella Proteome Microarray Discriminates Targets of Human Antibody Reactivity following Oral Vaccination and Experimental Challenge. mSphere 3 (4) (2018)
Kourtney P Nickerson, Rachael B Chanin, Jeticia R Sistrunk, David A Rasko, Peter J Fink, Eileen M Barry, James P Nataro, Christina S Faherty
Analysis of Shigella flexneri Resistance, Biofilm Formation, and Transcriptional Profile in Response to Bile Salts. Infection and immunity 85 (6) (2017)
Tracy H Hazen, Jane Michalski, Sushma Nagaraj, Iruka N Okeke, David A Rasko
Characterization of a Large Antibiotic Resistance Plasmid Found in Enteropathogenic Escherichia coli Strain B171 and Its Relatedness to Plasmids of Diverse E. coli and Shigella Strains. Antimicrobial agents and chemotherapy 61 (9) (2017)
Tracy H Hazen, Sean C Daugherty, Amol C Shetty, James P Nataro, David A Rasko
Transcriptional Variation of Diverse Enteropathogenic Escherichia coli Isolates under Virulence-Inducing Conditions. mSystems 2 (4) (2017)
Tracy H Hazen, Susan R Leonard, Keith A Lampel, David W Lacher, Anthony T Maurelli, David A Rasko
Investigating the Relatedness of Enteroinvasive Escherichia coli to Other E. coli and Shigella Isolates by Using Comparative Genomics. Infection and immunity 84 (8) (2016)