Jose F Muñoz (José F Muñoz)

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2018-2022
Publications (10 Years): 15

Top Venues

mBio

Nature communications

Journal of clinical microbiology

PLoS pathogens

Broad Institute

Universidad de Antioquía (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Broad Institute

United States

Postdoctoral Associate

Education History

Universidad de Antioquía

Colombia

PHD

Universidad de Antioquía

Colombia

MSC

Publications

Jose F Muñoz, Rory M Welsh, Terrance Shea, Dhwani Batra, Lalitha Gade, Dakota Howard, Lori A Rowe, Jacques F Meis, Anastasia P Litvintseva, Christina A Cuomo
Clade-specific chromosomal rearrangements and loss of subtelomeric adhesins in Candida auris. Genetics 218 (1) (2022)
Mark Voorhies, Shirli Cohen, Terrance P Shea, Semar Petrus, Jose F Muñoz, Shane Poplawski, William E Goldman, Todd P Michael, Christina A Cuomo, Anita Sil, Sinem Beyhan
Chromosome-Level Genome Assembly of a Human Fungal Pathogen Reveals Synteny among Geographically Distinct Species. mBio (2022)
Moira Kelly, Frank Pasmans, Jose F Muñoz, Terrance P Shea, Salvador Carranza, Christina A Cuomo, An Martel
Diversity, multifaceted evolution, and facultative saprotrophism in the European Batrachochytrium salamandrivorans epidemic. Nature communications 12 (1) (2021)
Matthew Chung, Vincent M Bruno, David A Rasko, Christina A Cuomo, Jose F Muñoz, Jonathan Livny, Amol Carl Shetty, Anup Mahurkar, Julie C Dunning Hotopp
Best practices on the differential expression analysis of multi-species RNA-seq. Genome biology 22 (1) (2021)
Hans Carolus, Siebe Pierson, Jose F Muñoz, Ana Subotić, Rita B Cruz, Christina A Cuomo, Patrick Van Dijck
Genome-Wide Analysis of Experimentally Evolved Candida auris Reveals Multiple Novel Mechanisms of Multidrug Resistance. mBio 12 (2) (2021)
Kali R Iyer, Kaddy Camara, Martin Daniel-Ivad, Richard Trilles, Sheila M Pimentel-Elardo, Jen L Fossen, Karen Marchillo, Zhongle Liu, Shakti Singh, Jose F Muñoz, Sang Hu Kim, John A Porco, Christina A Cuomo, Noelle S Williams, Ashraf S Ibrahim, John E Edwards, David R Andes, Justin R Nodwell, Lauren E Brown, Luke Whitesell, Nicole Robbins, Leah E Cowen
An oxindole efflux inhibitor potentiates azoles and impairs virulence in the fungal pathogen Candida auris. Nature communications 11 (1) (2020)
Nancy A Chow, Jose F Muñoz, Lalitha Gade, Elizabeth L Berkow, Xiao Li, Rory M Welsh, Kaitlin Forsberg, Shawn R Lockhart, Rodney Adam, Alexandra Serris, Ana-Alastruey Izquierdo, Sahar Althawadi, Ana Belén Araúz, Ronen Ben-Ami, Amrita Bharat, Belinda Calvo, Marie Desnos-Olivier, Patricia Escandón, Dianne Gardam, Revathi Gunturu, Christopher H Heath, Oliver Kurzai, Ronny Martin, Anastasia P Litvintseva, Christina A Cuomo
Tracing the Evolutionary History and Global Expansion of Candida auris Using Population Genomic Analyses. mBio 11 (2) (2020)
Jeffrey M Rybak, Jose F Muñoz, Katherine S Barker, Josie E Parker, Brooke D Esquivel, Elizabeth L Berkow, Shawn R Lockhart, Lalitha Gade, Glen E Palmer, Theodore C White, Steve L Kelly, Christina A Cuomo, P David Rogers
Mutations in TAC1B: a Novel Genetic Determinant of Clinical Fluconazole Resistance in Candida auris. mBio 11 (3) (2020)
Tsidiso G Maphanga, Monica Birkhead, Jose F Muñoz, Mushal Allam, Thokozile G Zulu, Christina A Cuomo, Ilan S Schwartz, Arshad Ismail, Serisha D Naicker, Ruth S Mpembe, Craig Corcoran, Sybren de Hoog, Chris Kenyon, Andrew M Borman, John A Frean, Nelesh P Govender MMed
Human Blastomycosis in South Africa Caused by Blastomyces percursus and Blastomyces emzantsi sp. nov., 1967 to 2014. Journal of clinical microbiology 58 (3) (2020)
Jian Bing, Tianren Hu, Qiushi Zheng, Jose F Muñoz, Christina A Cuomo, Guanghua Huang
Experimental Evolution Identifies Adaptive Aneuploidy as a Mechanism of Fluconazole Resistance in Candida auris. Antimicrobial agents and chemotherapy 65 (1) (2020)
Ilan S Schwartz, Nelesh P Govender MMed, Lynne Sigler, Yanping Jiang, Tsidiso G Maphanga, Barbra Toplis, Alfred Botha, Karolina Dukik, Jennifer Claire Hoving, Jose F Muñoz, Gerrit Sybren de Hoog, Christina A Cuomo, Robert Colebunders, Chris Kenyon
Emergomyces: The global rise of new dimorphic fungal pathogens. PLoS pathogens 15 (9) (2019)
Jose F Muñoz, Toni Marie Delorey, Christopher B Ford, Bi Yu Li, Dawn A Thompson, Reeta P Rao, Christina A Cuomo
Coordinated host-pathogen transcriptional dynamics revealed using sorted subpopulations and single macrophages infected with Candida albicans. Nature communications 10 (1) (2019)
Georges Ambaraghassi, Philippe J Dufresne, Simon F Dufresne, Émilie Vallières, Jose F Muñoz, Christina A Cuomo, Elizabeth L Berkow, Shawn R Lockhart, Me-Linh Luong
Identification of Candida auris by Use of the Updated Vitek 2 Yeast Identification System, Version 8.01: a Multilaboratory Evaluation Study. Journal of clinical microbiology 57 (11) (2019)
Jose F Muñoz, Lalitha Gade, Nancy A Chow, Vladimir N Loparev, Phalasy Juieng, Elizabeth L Berkow, Rhys A Farrer, Anastasia P Litvintseva, Christina A Cuomo
Genomic insights into multidrug-resistance, mating and virulence in Candida auris and related emerging species. Nature communications 9 (1) (2018)
Jose F Muñoz, Juan G McEwen, Oliver K Clay, Christina A Cuomo
Genome analysis reveals evolutionary mechanisms of adaptation in systemic dimorphic fungi. Scientific reports 8 (1) (2018)

Jose F Muñoz.css-eqlu8i{font-size:small;padding-left:4px;} (José F Muñoz)

Publication Activity (10 Years)

Top Topics

Top Venues

Jose F Muñoz (José F Muñoz)