Gerald Schwank

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 24

Top Topics

Machine Learning

Gene Expression

Top Venues

Nature biotechnology

Nature communications

Advanced materials (Deerfield Beach, Fla.)

This page only lists publications with an associated author ORCID identifier.

Publications

Nicolas Mathis, Ahmed Allam, András Tálas, Lucas Kissling, Elena Benvenuto, Lukas Schmidheini, Ruben Schep, Tanav Damodharan, Zsolt Balázs, Sharan Janjuha, Eleonora I Ioannidi, Desirée Böck, Bas van Steensel, Michael Krauthammer, Gerald Schwank
Publisher Correction: Machine learning prediction of prime editing efficiency across diverse chromatin contexts. Nature biotechnology (2024)
Nicolas Mathis, Ahmed Allam, András Tálas, Lucas Kissling, Elena Benvenuto, Lukas Schmidheini, Ruben Schep, Tanav Damodharan, Zsolt Balázs, Sharan Janjuha, Eleonora I Ioannidi, Desirée Böck, Bas van Steensel, Michael Krauthammer, Gerald Schwank
Machine learning prediction of prime editing efficiency across diverse chromatin contexts. Nature biotechnology (2024)
Yanik Weber, Désirée Böck, Anastasia Ivașcu, Nicolas Mathis, Tanja Rothgangl, Eleonora I Ioannidi, Alex C Blaudt, Lisa Tidecks, Máté Vadovics, Hiromi Muramatsu, Andreas Reichmuth, Kim Fabiano Marquart, Lucas Kissling, Norbert Pardi, Martin Jinek, Gerald Schwank
Enhancing prime editor activity by directed protein evolution in yeast. Nature communications 15 (1) (2024)
Nicolas Mathis, Ahmed Allam, András Tálas, Lucas Kissling, Elena Benvenuto, Lukas Schmidheini, Ruben Schep, Tanav Damodharan, Zsolt Balázs, Sharan Janjuha, Eleonora I Ioannidi, Desirée Böck, Bas van Steensel, Michael Krauthammer, Gerald Schwank
Machine learning prediction of prime editing efficiency across diverse chromatin contexts. Nature biotechnology (2024)
Nicolas Mathis, Ahmed Allam, András Tálas, Lucas Kissling, Elena Benvenuto, Lukas Schmidheini, Ruben Schep, Tanav Damodharan, Zsolt Balázs, Sharan Janjuha, Eleonora I Ioannidi, Desirée Böck, Bas van Steensel, Michael Krauthammer, Gerald Schwank
Publisher Correction: Machine learning prediction of prime editing efficiency across diverse chromatin contexts. Nature biotechnology (2024)
Yanik Weber, Désirée Böck, Anastasia Ivașcu, Nicolas Mathis, Tanja Rothgangl, Eleonora I Ioannidi, Alex C Blaudt, Lisa Tidecks, Máté Vadovics, Hiromi Muramatsu, Andreas Reichmuth, Kim Fabiano Marquart, Lucas Kissling, Norbert Pardi, Martin Jinek, Gerald Schwank
Enhancing prime editor activity by directed protein evolution in yeast. Nature communications 15 (1) (2024)
Nicolas Mathis, Ahmed Allam, András Tálas, Lucas Kissling, Elena Benvenuto, Lukas Schmidheini, Ruben Schep, Tanav Damodharan, Zsolt Balázs, Sharan Janjuha, Eleonora I Ioannidi, Desirée Böck, Bas van Steensel, Michael Krauthammer, Gerald Schwank
Machine learning prediction of prime editing efficiency across diverse chromatin contexts. Nature biotechnology (2024)
Yanik Weber, Désirée Böck, Anastasia Ivașcu, Nicolas Mathis, Tanja Rothgangl, Eleonora I Ioannidi, Alex C Blaudt, Lisa Tidecks, Máté Vadovics, Hiromi Muramatsu, Andreas Reichmuth, Kim Fabiano Marquart, Lucas Kissling, Norbert Pardi, Martin Jinek, Gerald Schwank
Enhancing prime editor activity by directed protein evolution in yeast. Nature communications 15 (1) (2024)
Nicolas Mathis, Ahmed Allam, András Tálas, Lucas Kissling, Elena Benvenuto, Lukas Schmidheini, Ruben Schep, Tanav Damodharan, Zsolt Balázs, Sharan Janjuha, Eleonora I Ioannidi, Desirée Böck, Bas van Steensel, Michael Krauthammer, Gerald Schwank
Publisher Correction: Machine learning prediction of prime editing efficiency across diverse chromatin contexts. Nature biotechnology (2024)
Nicolas Mathis, Ahmed Allam, András Tálas, Lucas Kissling, Elena Benvenuto, Lukas Schmidheini, Ruben Schep, Tanav Damodharan, Zsolt Balázs, Sharan Janjuha, Eleonora I Ioannidi, Desirée Böck, Bas van Steensel, Michael Krauthammer, Gerald Schwank
Machine learning prediction of prime editing efficiency across diverse chromatin contexts. Nature biotechnology (2024)
Yanik Weber, Désirée Böck, Anastasia Ivașcu, Nicolas Mathis, Tanja Rothgangl, Eleonora I Ioannidi, Alex C Blaudt, Lisa Tidecks, Máté Vadovics, Hiromi Muramatsu, Andreas Reichmuth, Kim Fabiano Marquart, Lucas Kissling, Norbert Pardi, Martin Jinek, Gerald Schwank
Enhancing prime editor activity by directed protein evolution in yeast. Nature communications 15 (1) (2024)
Lukas Schmidheini, Nicolas Mathis, Kim Fabiano Marquart, Tanja Rothgangl, Lucas Kissling, Désirée Böck, Christelle Chanez, Jingrui Priscilla Wang, Martin Jinek, Gerald Schwank
Continuous directed evolution of a compact CjCas9 variant with broad PAM compatibility. Nature chemical biology (2023)
Nicolas Mathis, Ahmed Allam, Lucas Kissling, Kim Fabiano Marquart, Lukas Schmidheini, Cristina Solari, Zsolt Balázs, Michael Krauthammer, Gerald Schwank
Predicting prime editing efficiency and product purity by deep learning. Nature biotechnology (2023)
Patrik Simmler, Eleonora I Ioannidi, Tamara Mengis, Kim Fabiano Marquart, Simran Asawa, Kjong Van-Lehmann, André Khales, Tinu Thomas, Cornelia Schwerdel, Nicola Aceto, Gunnar Rätsch, Markus Stoffel, Gerald Schwank
Mutant SF3B1 promotes malignancy in PDAC. eLife 12 (2023)
Nicolas Mathis, Ahmed Allam, Lucas Kissling, Kim Fabiano Marquart, Lukas Schmidheini, Cristina Solari, Zsolt Balázs, Michael Krauthammer, Gerald Schwank
Predicting prime editing efficiency and product purity by deep learning. Nature biotechnology (2023)
Nina Frey, Luigi Tortola, David Egli, Sharan Janjuha, Tanja Rothgangl, Kim Fabiano Marquart, Franziska Ampenberger, Manfred Kopf, Gerald Schwank
Loss of Rnf31 and Vps4b sensitizes pancreatic cancer to T cell-mediated killing. Nature communications 13 (1) (2022)
Désirée Böck, Tanja Rothgangl, Lukas Villiger, Lukas Schmidheini, Mai Matsushita, Nicolas Mathis, Eleonora Ioannidi, Nicole Rimann, Hiu Man Grisch-Chan, Susanne Kreutzer, Zacharias Kontarakis, Manfred Kopf, Beat Thöny, Gerald Schwank
In vivo prime editing of a metabolic liver disease in mice. Science translational medicine 14 (636) (2022)
Lukas Villiger, Tanja Rothgangl, Dominik Witzigmann, Rurika Oka, Paulo J C Lin, Weihong Qi, Sharan Janjuha, Christian Berk, Femke Ringnalda, Mitchell B Beattie, Markus Stoffel, Beat Thöny, Jonathan Hall, Hubert Rehrauer, Ruben van Boxtel, Ying K Tam, Gerald Schwank
In vivo cytidine base editing of hepatocytes without detectable off-target mutations in RNA and DNA. Nature biomedical engineering 5 (2) (2021)
Algera Goga, Büsra Yagabasan, Karolin Herrmanns, Svenja Godbersen, Pamuditha N Silva, Remy Denzler, Mirjam Zünd, Markus Furter, Gerald Schwank, Shinichi Sunagawa, Wolf-Dietrich Hardt, Markus Stoffel
miR-802 regulates Paneth cell function and enterocyte differentiation in the mouse small intestine. Nature communications 12 (1) (2021)
Kim Fabiano Marquart, Ahmed Allam, Sharan Janjuha, Anna Sintsova, Lukas Villiger, Nina Frey, Michael Krauthammer, Gerald Schwank
Predicting base editing outcomes with an attention-based deep learning algorithm trained on high-throughput target library screens. Nature communications 12 (1) (2021)
Tanja Rothgangl, Melissa K Dennis, Paulo J C Lin, Rurika Oka, Dominik Witzigmann, Lukas Villiger, Weihong Qi, Martina Hruzova, Lucas Kissling, Daniela Lenggenhager, Costanza Borrelli, Sabina Egli, Nina Frey, Noëlle Bakker, John A Walker, Anastasia P Kadina, Denis V Victorov, Martin Pacesa, Susanne Kreutzer, Zacharias Kontarakis, Andreas E Moor, Martin Jinek, Drew Weissman, Markus Stoffel, Ruben van Boxtel, Kevin Holden, Norbert Pardi, Beat Thöny, Johannes Häberle, Ying K Tam, Sean C Semple, Gerald Schwank
In vivo adenine base editing of PCSK9 in macaques reduces LDL cholesterol levels. Nature biotechnology 39 (8) (2021)
Nicolas Broguiere, Luca Isenmann, Christian Hirt, Till Ringel, Silja Placzek, Emma Cavalli, Femke Ringnalda, Lukas Villiger, Richard Züllig, Roger Lehmann, Gerhard Rogler, Markus H Heim, Julia Schüler, Marcy Zenobi-Wong, Gerald Schwank
Growth of Epithelial Organoids in a Defined Hydrogel. Advanced materials (Deerfield Beach, Fla.) 30 (43) (2018)
Lukas Villiger, Hiu Man Grisch-Chan, Helen Lindsay, Femke Ringnalda, Chiara B Pogliano, Gabriella Allegri, Ralph Fingerhut, Johannes Häberle, Joao Matos, Mark D Robinson, Beat Thöny, Gerald Schwank
Treatment of a metabolic liver disease by in vivo genome base editing in adult mice. Nature medicine 24 (10) (2018)
Natasa Savic, Femke C A Ringnalda, Helen Lindsay, Christian Berk, Katja Bargsten, Yizhou Li, Dario Neri, Mark D Robinson, Constance Ciaudo, Jonathan Hall, Martin Jinek, Gerald Schwank
Covalent linkage of the DNA repair template to the CRISPR-Cas9 nuclease enhances homology-directed repair. eLife 7 (2018)